FFCP PHASE1:Hg19::chr5:140012773..140012794,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:140012773..140012794,- to FFCP PHASE1:Hg19::chr5:140012773..140012794,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=929 | |EntrezGene=929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1628 | |HGNC=1628 | ||
|TSSclassifier=strong | |||
|UniProt=P08571 | |UniProt=P08571 | ||
|association_with_transcript=215bp_to_uc003lgi.1_5end | |||
|cluster_id=chr5:140012773..140012794,- | |||
|coexpression_cluster_id=C803 | |||
|description=CAGE_peak_2_at_CD14_5end | |||
|id=chr5:140012773..140012794,- | |||
|ontology_enrichment_celltype=CL:0000766!2.26e-29!76;CL:0002057!1.52e-28!42;CL:0002194!2.24e-25!63;CL:0000576!2.24e-25!63;CL:0000040!2.24e-25!63;CL:0000559!2.24e-25!63;CL:0002009!5.15e-25!65;CL:0000860!1.03e-24!45;CL:0000557!1.86e-23!71;CL:0000839!6.55e-23!70;CL:0000738!9.29e-17!140;CL:0002087!9.54e-14!119;CL:0002031!3.26e-12!124;CL:0000763!1.11e-11!112;CL:0000049!1.11e-11!112;CL:0000037!3.96e-08!172;CL:0000566!3.96e-08!172;CL:0002032!4.63e-07!165;CL:0000837!4.63e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-26;33!CL:0002057;3.07e-26;33!CL:0000473;5.18e-26;39!CL:0000234;5.18e-26;39!CL:0000576;1.59e-21;48!CL:0000766;7.93e-18;69!CL:0000094;3.32e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.53e-39,48;CL:0000234,4.53e-39,48;CL:0000766,4.56e-37,72;CL:0000860,3.71e-34,42;CL:0002057,3.71e-34,42;CL:0002194,8.33e-33,59;CL:0000576,8.33e-33,59;CL:0000040,8.33e-33,59;CL:0000559,8.33e-33,59;CL:0002009,8.54e-32,61;CL:0000557,1.92e-29,67;CL:0000839,1.96e-29,66;CL:0000738,7.99e-21,136;CL:0002087,7.45e-18,115;CL:0000763,2.20e-16,108;CL:0000049,2.20e-16,108;CL:0002031,1.70e-15,120;CL:0000037,1.85e-11,168;CL:0002032,3.10e-10,161;CL:0000837,3.10e-10,161;CL:0000988,1.60e-09,177;CL:0000094,3.32e-07,8;CL:0002393,8.02e-07,9;CL:0002397,8.02e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.55e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-38!115;UBERON:0002390!1.16e-23!102;UBERON:0003061!1.16e-23!102;UBERON:0002193!7.65e-23!112;UBERON:0002405!5.38e-20!115;UBERON:0002371!2.60e-19!80;UBERON:0001474!1.05e-15!86;UBERON:0000062!1.71e-12!511;UBERON:0004765!2.17e-12!101;UBERON:0001434!2.17e-12!101;UBERON:0001049!8.42e-12!57;UBERON:0005068!8.42e-12!57;UBERON:0006241!8.42e-12!57;UBERON:0007135!8.42e-12!57;UBERON:0003081!4.66e-11!216;UBERON:0000480!9.05e-11!626;UBERON:0000467!9.19e-11!625;UBERON:0002616!1.05e-09!59;UBERON:0003080!1.38e-09!42;UBERON:0000479!1.66e-09!787;UBERON:0002780!3.34e-09!41;UBERON:0001890!3.34e-09!41;UBERON:0006240!3.34e-09!41;UBERON:0000468!5.39e-09!659;UBERON:0002204!7.53e-08!167;UBERON:0002050!9.27e-08!605;UBERON:0005423!9.27e-08!605;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0002020!1.37e-07!34;UBERON:0003528!1.37e-07!34;UBERON:0000922!1.63e-07!612;UBERON:0003075!2.24e-07!86;UBERON:0007284!2.24e-07!86;UBERON:0001893!2.90e-07!34;UBERON:0000955!3.83e-07!69;UBERON:0006238!3.83e-07!69;UBERON:0002791!4.57e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.77e-11;114!UBERON:0002780;1.58e-07;41!UBERON:0001890;1.58e-07;41!UBERON:0000073;2.05e-07;53!UBERON:0002616;2.05e-07;53!UBERON:0003528;3.53e-07;34!UBERON:0002020;3.53e-07;34!UBERON:0001893;6.19e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.58e-44,114;UBERON:0002390,8.63e-30,98;UBERON:0003061,8.63e-30,98;UBERON:0002193,4.70e-28,108;UBERON:0002371,1.31e-23,76;UBERON:0002405,2.34e-22,93;UBERON:0001474,4.63e-20,82;UBERON:0004765,3.56e-16,90;UBERON:0003081,4.48e-16,203;UBERON:0001434,1.90e-14,100;UBERON:0001049,2.81e-13,56;UBERON:0005068,2.81e-13,56;UBERON:0006241,2.81e-13,56;UBERON:0007135,2.81e-13,56;UBERON:0000923,8.78e-13,560;UBERON:0010316,8.78e-13,560;UBERON:0005291,8.78e-13,560;UBERON:0006598,8.78e-13,560;UBERON:0010317,8.78e-13,560;UBERON:0002532,8.78e-13,560;UBERON:0002050,1.50e-12,564;UBERON:0000073,4.93e-12,53;UBERON:0002616,4.93e-12,53;UBERON:0000479,2.96e-11,773;UBERON:0005423,5.30e-11,581;UBERON:0000922,1.40e-10,592;UBERON:0002780,4.12e-10,41;UBERON:0001890,4.12e-10,41;UBERON:0003080,4.12e-10,41;UBERON:0006240,4.12e-10,41;UBERON:0000955,2.13e-08,68;UBERON:0006238,2.13e-08,68;UBERON:0001017,3.42e-08,81;UBERON:0003528,3.46e-08,34;UBERON:0002020,3.46e-08,34;UBERON:0000926,5.32e-08,315;UBERON:0004120,5.32e-08,315;UBERON:0006603,5.32e-08,315;UBERON:0003075,7.23e-08,82;UBERON:0007284,7.23e-08,82;UBERON:0001893,8.17e-08,34;UBERON:0010314,1.19e-07,132;UBERON:0002204,1.36e-07,167;UBERON:0002791,2.80e-07,32;UBERON:0001869,4.96e-07,32;UBERON:0002346,7.49e-07,86 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.563817616383885,0,0.446961094427288,0,7.59899634504932,0.631719873426831,3.91778442299758,0,0,0,0,0,0,4.03395087871065,0,0,0,0,0,0,0,0,0,0,0,0,125.089840037951,72.9275856384704,81.7429131108881,0.919421224478927,0,0,0,0,0.880801318004542,135.174879681778,158.831202396352,168.834457416933,247.874429983596,180.732665638591,242.636184711404,280.037007889442,147.749493982324,175.630860299979,323.773648409619,143.086425031595,227.943888978796,510.653996371817,298.427223106402,485.498017961265,309.92636698222,145.879538489945,220.745173148777,323.02385465511,145.186071830774,299.781128249743,362.70941245952,228.501467278179,300.488449125549,435.073864946279,309.168669313529,309.439168886736,220.268812119095,137.307224375256,226.707298634389,341.446936083914,223.716172002266,322.959812076508,233.078808513847,185.611928537733,273.739965136365,79.643242939602,57.4031609905618,151.163883411539,417.750179233815,400.221419422614,249.606836140565,10.2604587746849,4.77400025277816,12.969154917289,0,2.18455444504853,0.889509253863555,17.9226693477933,0.400395987036012,5.17277195959035,3.96626923670917,2.86216126360609,1.70763890732835,4.11066032559657,2.29363936875137,0,11.2101712596307,0.790152254325231,0.983548850569165,0.393010762749165,1.85041349099558,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0.296573126324121,0,0,0,1.14966148080576,0,0,3.18565414324097,0,0.950452044448374,11.5942841689885,4.22355816809581,13.742379920758,12.3124171062889,4.10563998460523,0,0,0.434473211648397,0,5.36560687762909,2.9408389224012,0.722878304769133,0,1.44846518960824,0.795285947051099,0.973269740605272,0,0,0.527008714158756,14.9971041444881,1.09288586487763,1.48313777113772,0,0,0.398873881556595,15.2633999555419,15.4438625910635,5.57186251994347,0.596287222100115,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,134.416025784785,240.423763771962,0,1.98788780678127,7.21793916488105,1.19168262731897,4.30254931123221,2.12801029319014,14.5776176037,4.2699598291882,12.8267125176923,0.311211035399766,2.2900814251847,1.47115712802113,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,2.04154171254893,0,1.34323515528495,2.37600571456411,2.22540236350701,1.82032272387605,0.718618141816238,0.336672227908132,0,1.10825646193673,0,0.919463387397059,0.751190294532984,6.57906662328122,0.179389635688862,0.85422955527427,0,0.600182192168805,0.103052529238439,1.28820270022815,1.11670113798954,0.168776332241266,0.194874010322397,0.504867548488229,0.0920498986422993,0.969876340912871,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0.860413786167011,0,0,0.116193942869518,0,0,0,3.12899064659632,9.00537313470039,4.14404764057442,23.6827643296309,17.3251075600701,0,0,0,0,0,0,0.134831308160164,0,0,0,0,1.6462960453256,19.1111324801205,128.022585170049,343.989525837169,241.633071832694,0,4.91953754172454,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0.234817388471643,1.58803092537181,0.925971025153221,1.52203321787679,0,0.858486162094873,306.786389584897,43.9928018461767,183.262223102002,0,0,0,0,0.290633938513962,0.383382679165211,0,1.84901711427775,0.621984346622316,6.19715799692934,1.2624243342638,0,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0.07333828582095,0.387815147273333,7.15312891703765,0,0.531876233169741,0,0,0,0,1.42977993658148,2.71310802695722,0,0,0.710783897485092,0,3.91871190177462,3.48613383440118,2.89921674427965,289.464597926033,262.17820172757,183.425527350238,0,0,0,0.434343920002738,0,0.179060963239896,0,4.72873824484625,0.646882724578552,7.18721003166591,0,0,0,3.85287410269002,0,75.6497094186654,116.67296908957,87.4416733350035,0,0,0,0.415941723061614,0,1.10391690523754,2.81139395982512,1.20378439891088,2.27407504055985,0,0,0,0,0.195801157462741,0,90.7711634679476,83.0499673151675,66.064358280332,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,2.17836553734692,0,1.12597744800525,0,0,0,0,0,0,5.07609688284813,0.200506470303285,1.01289087829486,0,0,0.262248829918848,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,58.630335627554,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.255225424989168,0.30347334256665,0,1.5740617341532,0,2.7723022215848,0.532306030317022,0,0.55597265731176,9.8756171851974,0,0.632758849437452,2.85945290885737,0.767693373934002,0,0.95460974377781,3.92474320099615,0.539617372749944,0,0,1.41527737101321,3.17020642346017,0.421258456238981,0,2.19342140668156,1.05650146756755,0.272999822815972,0,0,0,5.30751180192976,2.19225442626881,0,0,2.02910376962704,1.54911749049875,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,4.22215270595328,1.97576935775941,0,0.349934720244983,0.192444225451024,1.34060455107157,1.08890984861323,64.5826473328705,0,0,0,0,72.5650081202002,68.0527114356714,102.536493691349,66.4666653527231,92.9678737174799,95.3255767453294,73.9843069016217,68.2087651613073,0,0,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| ||
|short_description=p2@CD14 | |||
}} | }} |
Latest revision as of 02:27, 25 September 2015
Short description: | p2@CD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD14_5end |
Coexpression cluster: | C803_Macrophage_CD14_Monocytederived_Eosinophils_Basophils_CD14CD16_Dendritic |
Association with transcript: | 215bp_to_uc003lgi.1_5end |
EntrezGene: | CD14 |
HGNC: | 1628 |
UniProt: | P08571 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.53e-39 | 48 |
phagocyte | 4.53e-39 | 48 |
myeloid leukocyte | 4.56e-37 | 72 |
classical monocyte | 3.71e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.71e-34 | 42 |
monopoietic cell | 8.33e-33 | 59 |
monocyte | 8.33e-33 | 59 |
monoblast | 8.33e-33 | 59 |
promonocyte | 8.33e-33 | 59 |
macrophage dendritic cell progenitor | 8.54e-32 | 61 |
granulocyte monocyte progenitor cell | 1.92e-29 | 67 |
myeloid lineage restricted progenitor cell | 1.96e-29 | 66 |
leukocyte | 7.99e-21 | 136 |
nongranular leukocyte | 7.45e-18 | 115 |
myeloid cell | 2.20e-16 | 108 |
common myeloid progenitor | 2.20e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.70e-15 | 120 |
hematopoietic stem cell | 1.85e-11 | 168 |
hematopoietic oligopotent progenitor cell | 3.10e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.10e-10 | 161 |
hematopoietic cell | 1.60e-09 | 177 |
granulocyte | 3.32e-07 | 8 |
intermediate monocyte | 8.02e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.02e-07 | 9 |