FFCP PHASE1:Hg19::chr9:10612703..10612757,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:10612703..10612757,- to FFCP PHASE1:Hg19::chr9:10612703..10612757,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5789 | |EntrezGene=5789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9668 | |HGNC=9668 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8S8,P23468,Q2HXI4 | |UniProt=C9J8S8,P23468,Q2HXI4 | ||
|association_with_transcript=0bp_to_ENST00000463477,NM_002839,uc003zkt.1_5end | |||
|cluster_id=chr9:10612703..10612757,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_PTPRD_5end | |||
|id=chr9:10612703..10612757,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.84e-15;82!UBERON:0010122;1.89e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.44e-67!57;UBERON:0005068!4.44e-67!57;UBERON:0006241!4.44e-67!57;UBERON:0007135!4.44e-67!57;UBERON:0001017!1.12e-64!82;UBERON:0002780!1.60e-64!41;UBERON:0001890!1.60e-64!41;UBERON:0006240!1.60e-64!41;UBERON:0003080!9.48e-63!42;UBERON:0005743!5.13e-61!86;UBERON:0001893!2.58e-58!34;UBERON:0002020!2.68e-58!34;UBERON:0003528!2.68e-58!34;UBERON:0002791!3.92e-56!33;UBERON:0002616!2.65e-55!59;UBERON:0001869!6.48e-55!32;UBERON:0000073!6.86e-54!94;UBERON:0001016!6.86e-54!94;UBERON:0000955!5.76e-53!69;UBERON:0006238!5.76e-53!69;UBERON:0002619!4.33e-47!22;UBERON:0003075!1.66e-46!86;UBERON:0007284!1.66e-46!86;UBERON:0002346!7.72e-44!90;UBERON:0001950!2.97e-43!20;UBERON:0003056!2.87e-42!61;UBERON:0000956!7.98e-41!25;UBERON:0000203!7.98e-41!25;UBERON:0007023!1.56e-34!115;UBERON:0004121!1.97e-28!169;UBERON:0000924!2.00e-27!173;UBERON:0006601!2.00e-27!173;UBERON:0000033!3.54e-27!123;UBERON:0000153!1.43e-26!129;UBERON:0007811!1.43e-26!129;UBERON:0002420!5.06e-19!9;UBERON:0007245!5.06e-19!9;UBERON:0010009!5.06e-19!9;UBERON:0010011!5.06e-19!9;UBERON:0000454!5.06e-19!9;UBERON:0002308!1.03e-18!9;UBERON:0000125!1.03e-18!9;UBERON:0000025!8.52e-16!194;UBERON:0009663!6.45e-15!7;UBERON:0000200!1.18e-14!6;UBERON:0001871!1.35e-14!7;UBERON:0002021!4.41e-13!5;UBERON:0001872!1.46e-12!5;UBERON:0000349!1.15e-11!5;UBERON:0000064!2.64e-11!219;UBERON:0004111!7.13e-11!241;UBERON:0000483!6.64e-10!309;UBERON:0000369!9.24e-10!4;UBERON:0002435!9.24e-10!4;UBERON:0000204!9.24e-10!4;UBERON:0010082!9.24e-10!4;UBERON:0000119!1.13e-09!312;UBERON:0000477!2.06e-09!286;UBERON:0000475!2.22e-09!365;UBERON:0002298!4.12e-09!8;UBERON:0002771!2.35e-08!3;UBERON:0003076!5.24e-08!15;UBERON:0003057!5.24e-08!15;UBERON:0001894!6.31e-08!7;UBERON:0006222!6.31e-08!7;UBERON:0000922!9.76e-08!612;UBERON:0005383!1.24e-07!3;UBERON:0005382!1.24e-07!3;UBERON:0002050!1.50e-07!605;UBERON:0005423!1.50e-07!605;UBERON:0000988!1.93e-07!3;UBERON:0002240!3.88e-07!3;UBERON:0000923!4.26e-07!604;UBERON:0005291!4.26e-07!604;UBERON:0006598!4.26e-07!604;UBERON:0002532!4.26e-07!604;UBERON:0006331!5.23e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.25e-71;20!UBERON:0002619;2.69e-71;22!UBERON:0001869;3.36e-71;32!UBERON:0003528;2.10e-69;34!UBERON:0002020;2.10e-69;34!UBERON:0002791;2.51e-66;32!UBERON:0001893;9.88e-65;34!UBERON:0000956;1.99e-62;25!UBERON:0000203;1.99e-62;25!UBERON:0002780;7.98e-61;41!UBERON:0001890;7.98e-61;41!UBERON:0000073;2.33e-45;53!UBERON:0002616;2.33e-45;53!UBERON:0000955;1.16e-35;68!UBERON:0001017;8.42e-34;75!UBERON:0001016;5.49e-26;83!UBERON:0000200;2.63e-23;6!UBERON:0002021;1.04e-20;5!UBERON:0001871;6.74e-20;6!UBERON:0001872;8.37e-20;5!UBERON:0002420;2.44e-19;9!UBERON:0007245;2.44e-19;9!UBERON:0010009;2.44e-19;9!UBERON:0010011;2.44e-19;9!UBERON:0000454;2.44e-19;9!UBERON:0000125;5.88e-19;9!UBERON:0002308;5.88e-19;9!UBERON:0000369;3.10e-15;4!UBERON:0002435;3.10e-15;4!UBERON:0000204;3.10e-15;4!UBERON:0009663;5.13e-13;7!UBERON:0001894;1.21e-12;7!UBERON:0001870;1.90e-12;3!UBERON:0000349;2.34e-12;5!UBERON:0007023;4.82e-12;114!UBERON:0005383;1.06e-11;3!UBERON:0005382;1.06e-11;3!UBERON:0000988;2.72e-11;3!UBERON:0011216;1.61e-10;132!UBERON:0002298;1.24e-09;6!UBERON:0002771;3.88e-09;2!UBERON:0002702;1.01e-08;2!UBERON:0001876;1.54e-08;2!UBERON:0001873;1.89e-08;2!UBERON:0000007;3.32e-08;2!UBERON:0001897;3.51e-08;2!UBERON:0010225;3.51e-08;2!UBERON:0002148;4.89e-08;2!UBERON:0006331;4.89e-08;2!UBERON:0009662;4.89e-08;2!UBERON:0010314;3.45e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.43e-86,41;UBERON:0001890,1.43e-86,41;UBERON:0003080,1.43e-86,41;UBERON:0006240,1.43e-86,41;UBERON:0000073,2.01e-83,53;UBERON:0002616,2.01e-83,53;UBERON:0001049,3.37e-83,56;UBERON:0005068,3.37e-83,56;UBERON:0006241,3.37e-83,56;UBERON:0007135,3.37e-83,56;UBERON:0003528,2.14e-80,34;UBERON:0002020,2.14e-80,34;UBERON:0001869,4.52e-80,32;UBERON:0001017,1.52e-79,81;UBERON:0001893,4.30e-75,34;UBERON:0000955,1.51e-74,68;UBERON:0006238,1.51e-74,68;UBERON:0002791,5.55e-74,32;UBERON:0001950,1.77e-71,20;UBERON:0002619,2.21e-71,22;UBERON:0001016,8.38e-71,89;UBERON:0000956,1.68e-62,25;UBERON:0000203,1.68e-62,25;UBERON:0003056,4.84e-56,61;UBERON:0003075,2.41e-54,82;UBERON:0007284,2.41e-54,82;UBERON:0002346,1.96e-51,86;UBERON:0010371,1.64e-43,104;UBERON:0007023,1.34e-34,114;UBERON:0004121,1.56e-34,171;UBERON:0000924,1.56e-34,171;UBERON:0006601,1.56e-34,171;UBERON:0010314,1.26e-32,132;UBERON:0011216,3.08e-27,223;UBERON:0000200,2.48e-23,6;UBERON:0002021,1.04e-20,5;UBERON:0001871,6.22e-20,6;UBERON:0001872,7.60e-20,5;UBERON:0000025,1.33e-19,192;UBERON:0002420,2.66e-19,9;UBERON:0007245,2.66e-19,9;UBERON:0010009,2.66e-19,9;UBERON:0010011,2.66e-19,9;UBERON:0000454,2.66e-19,9;UBERON:0000125,6.77e-19,9;UBERON:0002308,6.77e-19,9;UBERON:0000369,3.47e-15,4;UBERON:0002435,3.47e-15,4;UBERON:0000204,3.47e-15,4;UBERON:0010082,3.47e-15,4;UBERON:0004111,6.30e-14,240;UBERON:0009663,5.84e-13,7;UBERON:0001894,1.36e-12,7;UBERON:0006222,1.36e-12,7;UBERON:0001870,1.82e-12,3;UBERON:0000349,2.31e-12,5;UBERON:0005383,1.17e-11,3;UBERON:0005382,1.17e-11,3;UBERON:0000988,2.44e-11,3;UBERON:0000483,8.57e-10,306;UBERON:0002298,1.27e-09,6;UBERON:0000119,1.30e-09,309;UBERON:0002771,3.65e-09,2;UBERON:0002702,9.70e-09,2;UBERON:0001876,1.42e-08,2;UBERON:0001873,2.00e-08,2;UBERON:0010122,2.00e-08,2;UBERON:0000007,3.26e-08,2;UBERON:0001897,3.78e-08,2;UBERON:0010225,3.78e-08,2;UBERON:0002148,4.89e-08,2;UBERON:0006331,4.89e-08,2;UBERON:0009662,4.89e-08,2 | |||
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| ||
|short_description=p5@PTPRD | |||
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Latest revision as of 22:33, 19 September 2015
Short description: | p5@PTPRD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPRD_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000463477, NM_002839, uc003zkt.1_5end |
EntrezGene: | PTPRD |
HGNC: | 9668 |
UniProt: | C9J8S8P23468Q2HXI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data