FFCP PHASE1:Hg19::chr9:123239747..123239765,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:123239747..123239765,- to FFCP PHASE1:Hg19::chr9:123239747..123239765,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55755 | |EntrezGene=55755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18672 | |HGNC=18672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-115bp_to_ENST00000416449_5end | |||
|cluster_id=chr9:123239747..123239765,- | |||
|description=CAGE_peak_12_at_CDK5RAP2_5end | |||
|id=chr9:123239747..123239765,- | |||
|ontology_enrichment_celltype=CL:0000057!4.56e-16!75;CL:0000055!7.63e-16!180;CL:0002620!1.17e-12!23;CL:0000188!8.73e-08!9;CL:0000048!1.15e-07!430;CL:0002564!2.39e-07!3;CL:0000723!2.62e-07!436;CL:0000594!4.81e-07!3;CL:0000034!7.54e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.69e-22;3!CL:0002602;3.83e-16;2!CL:0000188;4.13e-13;9!CL:0000594;8.66e-11;3!CL:0000680;4.20e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.46e-22,3;CL:0002602,3.83e-16,2;CL:0000188,3.43e-13,9;CL:0000594,8.26e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.46e-08;1!UBERON:0008801;2.46e-08;1!UBERON:0003099;2.46e-08;1!UBERON:0003852;2.46e-08;1 | |||
|ontology_enrichment_disease=DOID:17!5.01e-07!5;DOID:450!5.01e-07!5;DOID:66!5.01e-07!5;DOID:423!5.01e-07!5;DOID:0080000!5.01e-07!5;DOID:11722!5.01e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.20e-09!95;UBERON:0000475!9.61e-09!365;UBERON:0002199!9.85e-09!45;UBERON:0002416!9.85e-09!45;UBERON:0000914!2.38e-08!83;UBERON:0002329!2.38e-08!83;UBERON:0003077!2.38e-08!83;UBERON:0003059!2.38e-08!83;UBERON:0007282!2.38e-08!83;UBERON:0009618!2.38e-08!83;UBERON:0007285!2.38e-08!83;UBERON:0002097!4.77e-08!40;UBERON:0002242!2.39e-07!3;UBERON:0003068!2.39e-07!3;UBERON:0002328!2.39e-07!3;UBERON:0004880!2.39e-07!3;UBERON:0004905!5.17e-07!5;UBERON:0000982!5.17e-07!5;UBERON:0004770!5.17e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;7.97e-37;5!UBERON:0002216;7.97e-37;5!UBERON:0011134;7.97e-37;5!UBERON:0002209;7.97e-37;5!UBERON:0002213;7.97e-37;5!UBERON:0007844;7.97e-37;5!UBERON:0011138;7.97e-37;5!UBERON:0001130;7.97e-37;5!UBERON:0001066;7.97e-37;5!UBERON:0001468;7.97e-37;5!UBERON:0004905;5.43e-23;8!UBERON:0000982;5.43e-23;8!UBERON:0004770;5.43e-23;8!UBERON:0002242;1.69e-22;3!UBERON:0000075;1.78e-21;16!UBERON:0006444;3.83e-16;2!UBERON:0001995;3.83e-16;2!UBERON:0004715;3.83e-16;2!UBERON:0001829;5.70e-15;2!UBERON:0004089;5.70e-15;2!UBERON:0004765;6.55e-13;26!UBERON:0001044;2.75e-11;6!UBERON:0003293;2.75e-11;6!UBERON:0003294;2.75e-11;6!UBERON:0010047;2.75e-11;6!UBERON:0003408;2.75e-11;6!UBERON:0000167;2.75e-11;6!UBERON:0001134;2.91e-11;16!UBERON:0002036;2.91e-11;16!UBERON:0002418;4.58e-11;3!UBERON:0004755;4.58e-11;3!UBERON:0002204;6.37e-09;70!UBERON:0001434;1.49e-08;36!UBERON:0001831;2.46e-08;1!UBERON:0001736;2.46e-08;1!UBERON:0007195;2.46e-08;1!UBERON:0005705;2.46e-08;1!UBERON:0008193;2.46e-08;1!UBERON:0010912;2.46e-08;1!UBERON:0002514;2.46e-08;1!UBERON:0003457;2.46e-08;1!UBERON:0008907;2.46e-08;1!UBERON:0008001;2.46e-08;1!UBERON:0007213;2.46e-08;1!UBERON:0009891;2.46e-08;1!UBERON:0007914;2.46e-08;1!UBERON:0007375;2.46e-08;1!UBERON:0003323;2.46e-08;1!UBERON:0010258;2.46e-08;1!UBERON:0005253;2.46e-08;1!UBERON:0007842;2.46e-08;1!UBERON:0001567;2.46e-08;1!UBERON:0002397;2.46e-08;1!UBERON:0003113;2.46e-08;1!UBERON:0003277;2.46e-08;1!UBERON:0001709;2.46e-08;1!UBERON:0002244;2.46e-08;1!UBERON:0005620;2.46e-08;1!UBERON:0010364;2.46e-08;1!UBERON:0004288;2.46e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,6.92e-37,5;UBERON:0002216,6.92e-37,5;UBERON:0011134,6.92e-37,5;UBERON:0002209,6.92e-37,5;UBERON:0002213,6.92e-37,5;UBERON:0005856,6.92e-37,5;UBERON:0005866,6.92e-37,5;UBERON:0005863,6.92e-37,5;UBERON:0007844,6.92e-37,5;UBERON:0011138,6.92e-37,5;UBERON:0001130,6.92e-37,5;UBERON:0001066,6.92e-37,5;UBERON:0001468,6.92e-37,5;UBERON:0004905,4.97e-23,8;UBERON:0000982,4.97e-23,8;UBERON:0004770,4.97e-23,8;UBERON:0002242,1.46e-22,3;UBERON:0003068,1.46e-22,3;UBERON:0002328,1.46e-22,3;UBERON:0004880,1.46e-22,3;UBERON:0000075,2.22e-21,16;UBERON:0006444,3.83e-16,2;UBERON:0001995,3.83e-16,2;UBERON:0004715,3.83e-16,2;UBERON:0001829,4.61e-15,2;UBERON:0004089,6.59e-15,2;UBERON:0011137,1.35e-12,14;UBERON:0001044,2.48e-11,6;UBERON:0003293,2.48e-11,6;UBERON:0003294,2.48e-11,6;UBERON:0010047,2.48e-11,6;UBERON:0000167,2.48e-11,6;UBERON:0002418,4.59e-11,3;UBERON:0004755,4.59e-11,3;UBERON:0001831,1.84e-08,1;UBERON:0001567,1.84e-08,1;UBERON:0008801,1.84e-08,1;UBERON:0001736,2.64e-08,1;UBERON:0006298,2.64e-08,1;UBERON:0000165,3.10e-08,29;UBERON:0000930,3.10e-08,29;UBERON:0007195,3.28e-08,1;UBERON:0005705,3.79e-08,1;UBERON:0008193,3.79e-08,1;UBERON:0010912,3.79e-08,1;UBERON:0002514,3.79e-08,1;UBERON:0003457,3.79e-08,1;UBERON:0008907,3.79e-08,1;UBERON:0008001,3.79e-08,1;UBERON:0007213,3.79e-08,1;UBERON:0009891,3.79e-08,1;UBERON:0007914,3.79e-08,1;UBERON:0009292,3.79e-08,1;UBERON:0003099,3.79e-08,1;UBERON:0007375,3.79e-08,1;UBERON:0003323,3.79e-08,1;UBERON:0010258,3.79e-08,1;UBERON:0007842,3.79e-08,1;UBERON:0009494,3.79e-08,1;UBERON:0010042,3.79e-08,1;UBERON:0010045,3.79e-08,1;UBERON:0010259,3.79e-08,1;UBERON:0010359,3.79e-08,1;UBERON:0009526,3.79e-08,1;UBERON:0002397,3.79e-08,1;UBERON:0003113,3.79e-08,1;UBERON:0003277,3.79e-08,1;UBERON:0001709,3.79e-08,1;UBERON:0004066,3.79e-08,1;UBERON:0002244,3.79e-08,1;UBERON:0005620,3.79e-08,1;UBERON:0004362,3.79e-08,1;UBERON:0010364,3.79e-08,1;UBERON:0010046,3.79e-08,1;UBERON:0005868,3.79e-08,1;UBERON:0007238,3.79e-08,1;UBERON:0004288,3.79e-08,1;UBERON:0004068,3.79e-08,1;UBERON:0010334,3.79e-08,1;UBERON:0003852,3.79e-08,1;UBERON:0010253,3.79e-08,1;UBERON:0000166,7.47e-08,22;UBERON:0003104,2.85e-07,160;UBERON:0009142,2.85e-07,160;UBERON:0003408,5.49e-07,10;UBERON:0002204,8.83e-07,167;UBERON:0003102,9.49e-07,99 | |||
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| ||
|short_description=p12@CDK5RAP2 | |||
}} | }} |
Latest revision as of 19:21, 24 September 2015
Short description: | p12@CDK5RAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CDK5RAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_ENST00000416449_5end |
EntrezGene: | CDK5RAP2 |
HGNC: | 18672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.46e-22 | 3 |
annulus pulposus cell | 3.83e-16 | 2 |
cell of skeletal muscle | 3.43e-13 | 9 |
skeletal muscle satellite cell | 8.26e-11 | 3 |