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FFCP PHASE1:Mm9::chr6:99216375..99216395,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:99216375..99216395,-
|DHSsupport=NA
|short_description=p5@Foxp1
|DPIdataset=NA
|description=CAGE_peak_5_at_Foxp1_5end
|association_with_transcript=99bp_to_ENSMUST00000113322,ENSMUST00000113326_5end
|EntrezGene=108655
|EntrezGene=108655
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P58462
|UniProt=P58462
|association_with_transcript=99bp_to_ENSMUST00000113322,ENSMUST00000113326_5end
|cluster_id=chr6:99216375..99216395,-
|description=CAGE_peak_5_at_Foxp1_5end
|id=chr6:99216375..99216395,-
|ontology_enrichment_celltype=CL:0000838!2.68e-10!12;CL:0000084!1.09e-09!11;CL:0000827!1.09e-09!11;CL:0000542!5.23e-09!13;CL:0000051!5.23e-09!13;CL:0000791!2.27e-08!9;CL:0000789!2.27e-08!9;CL:0002420!2.27e-08!9;CL:0002419!2.27e-08!9;CL:0000790!2.27e-08!9;CL:0000624!1.38e-07!8;CL:0000988!2.88e-07!32;CL:0002032!2.88e-07!32;CL:0000037!2.88e-07!32;CL:0000566!2.88e-07!32;CL:0000837!2.88e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000838,5.32e-19,12;CL:0000084,8.75e-18,11;CL:0000827,8.75e-18,11;CL:0000542,2.94e-17,13;CL:0000051,2.94e-17,13;CL:0000791,3.74e-15,9;CL:0000789,3.74e-15,9;CL:0002420,3.74e-15,9;CL:0002419,3.74e-15,9;CL:0000790,3.74e-15,9;CL:0000624,1.36e-13,8;CL:0000738,2.34e-12,17;CL:0002087,2.34e-12,17;CL:0002031,4.68e-12,25;CL:0000988,9.30e-11,32;CL:0002032,9.30e-11,32;CL:0000037,9.30e-11,32;CL:0000837,9.30e-11,32;CL:0000893,1.45e-10,6;CL:0002489,1.45e-10,6;CL:0000898,1.45e-10,6;CL:0000809,1.45e-10,6;CL:0000810,1.45e-10,6;CL:0000895,1.45e-10,6;CL:0000808,1.45e-10,6;CL:0000894,1.45e-10,6;CL:0000806,1.45e-10,6;CL:0000807,1.45e-10,6;CL:0000805,1.45e-10,6;CL:0002425,1.45e-10,6;CL:0002436,1.45e-10,6;CL:0002427,1.45e-10,6;CL:0002428,1.45e-10,6;CL:0002429,1.45e-10,6;CL:0002433,1.45e-10,6;CL:0002431,1.45e-10,6;CL:0002432,1.45e-10,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!4.86e-13!128;UBERON:0001555!4.86e-13!128;UBERON:0007026!4.86e-13!128;UBERON:0004119!7.96e-13!130;UBERON:0000925!7.96e-13!130;UBERON:0006595!7.96e-13!130;UBERON:0004921!1.52e-12!126;UBERON:0004185!1.52e-12!126;UBERON:0005409!6.95e-12!59;UBERON:0004177!3.03e-09!29;UBERON:0002193!5.71e-09!48;UBERON:0002390!5.83e-08!45;UBERON:0003061!5.83e-08!45;UBERON:0003408!1.66e-07!24;UBERON:0000160!2.09e-07!43;UBERON:0002370!3.18e-07!23;UBERON:0000974!3.18e-07!23;UBERON:0004807!3.18e-07!23;UBERON:0005058!3.18e-07!23;UBERON:0003351!3.18e-07!23;UBERON:0009113!3.18e-07!23;UBERON:0003295!3.18e-07!23;UBERON:0009722!3.18e-07!23;UBERON:0005562!3.18e-07!23;UBERON:0007690!3.18e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.61e-14,29;UBERON:0005057,2.61e-14,29;UBERON:0004921,5.38e-13,114;UBERON:0005409,1.05e-12,47;UBERON:0001007,1.41e-12,116;UBERON:0001555,1.41e-12,116;UBERON:0007026,1.41e-12,116;UBERON:0000160,2.56e-12,31;UBERON:0002193,2.95e-12,48;UBERON:0002405,2.95e-12,48;UBERON:0004119,3.59e-12,118;UBERON:0000925,3.59e-12,118;UBERON:0006595,3.59e-12,118;UBERON:0002390,5.35e-12,45;UBERON:0003061,5.35e-12,45;UBERON:0002370,8.61e-12,23;UBERON:0000974,8.61e-12,23;UBERON:0004807,8.61e-12,23;UBERON:0005058,8.61e-12,23;UBERON:0003351,8.61e-12,23;UBERON:0009113,8.61e-12,23;UBERON:0003295,8.61e-12,23;UBERON:0009722,8.61e-12,23;UBERON:0005562,8.61e-12,23;UBERON:0007690,8.61e-12,23;UBERON:0006562,3.98e-11,24;UBERON:0003408,3.98e-11,24;UBERON:0001557,3.98e-11,24;UBERON:0001042,3.98e-11,24;UBERON:0008814,3.98e-11,24;UBERON:0009145,3.98e-11,24;UBERON:0000077,6.15e-11,35;UBERON:0000072,1.95e-09,27
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0,1.00727563147134,1.63528848416868,8.52213934714403,5.77233760821834,11.2350972634557,4.79410311031414,7.49858294556162,18.318478102639,16.7847172644475,0.666219523631325,0.809901069559304,0,5.0473946457318,6.30726394586398,4.2438965179803,0.0850432901510698,4.26951090163807,4.4403964153619,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,1.44425809875637,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,8.70434570413613,11.0910953717013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,19.9382170408322,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0,0,0.578397427679647,0.884610551949874,0,0.662524555381181,0.484875253135222,0,0,0,3.0654846625031,1.1981512450592,0.599902730993408,0.762421362438388,0,0,0.376963056338593,0.173824320192276,0,0,0,0,0.746441823660558,0,0,0.260240885925407,0.229902104433473,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,1.40442637462647,0.257347907114715,0.568326998791185,0.621377317606506,0,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0.660837565967596,6.34681359992506,0,0.464473343720877,4.12375876230699,9.07575860805041,4.66993892074228,7.79925067061493,1.42358718463353,4.11747386810027,4.27269854960458,4.17808591286417,5.8489226135736,1.79763881730844,3.24207074812041,1.59313018603494,0,0,0,0,0,0.140271639780637,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0.83422552858047,0.196558995113203,0,0.202860121388503,1.20588579876208,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0,0,0.590603785761546,0,1.29214146584111,0,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,2.62332752966866,0,2.05045056957423,0.206386867963223,0.185194527369712,1.69531611304222,3.14396723758358,2.97411625168479,2.37969801991397,2.23922323717853,2.21119958087078,2.86401185404534,0.158167996790568,0.609958401380546,1.51207477150522,0.627264888043406,0.87345025498471,0.269728692769641,0.247960367176008,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,5.05617793005085,0,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,3.4856680360791,1.03382669022204,1.71642964911851,1.447929326445,1.51239277705261,3.70339946811059,3.17499077413087,4.55819918508119,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.888986911206461,0.824140228955577,0,0.252697211763798,0,0,0.749132059759059,0.192075457214608,0.459483751644906,2.38146845641537,0.231768651889711,0,1.64834360321323,1.03039244094078,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.0846146078916765,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0,1.00727563147134,1.63528848416868,8.52213934714403,5.77233760821834,11.2350972634557,4.79410311031414,7.49858294556162,18.318478102639,16.7847172644475,0.666219523631325,0.809901069559304,0,5.0473946457318,6.30726394586398,4.2438965179803,0.0850432901510698,4.26951090163807,4.4403964153619,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,1.44425809875637,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,8.70434570413613,11.0910953717013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,19.9382170408322,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0,0,0.578397427679647,0.884610551949874,0,0.662524555381181,0.484875253135222,0,0,0,3.0654846625031,1.1981512450592,0.599902730993408,0.762421362438388,0,0,0.376963056338593,0.173824320192276,0,0,0,0,0.746441823660558,0,0,0.260240885925407,0.229902104433473,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,1.40442637462647,0.257347907114715,0.568326998791185,0.621377317606506,0,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0.660837565967596,6.34681359992506,0,0.464473343720877,4.12375876230699,9.07575860805041,4.66993892074228,7.79925067061493,1.42358718463353,4.11747386810027,4.27269854960458,4.17808591286417,5.8489226135736,1.79763881730844,3.24207074812041,1.59313018603494,0,0,0,0,0,0.140271639780637,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0.83422552858047,0.196558995113203,0,0.202860121388503,1.20588579876208,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0,0,0.590603785761546,0,1.29214146584111,0,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,2.62332752966866,0,2.05045056957423,0.206386867963223,0.185194527369712,1.69531611304222,3.14396723758358,2.97411625168479,2.37969801991397,2.23922323717853,2.21119958087078,2.86401185404534,0.158167996790568,0.609958401380546,1.51207477150522,0.627264888043406,0.87345025498471,0.269728692769641,0.247960367176008,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,5.05617793005085,0,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,3.4856680360791,1.03382669022204,1.71642964911851,1.447929326445,1.51239277705261,3.70339946811059,3.17499077413087,4.55819918508119,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.888986911206461,0.824140228955577,0,0.252697211763798,0,0,0.749132059759059,0.192075457214608,0.459483751644906,2.38146845641537,0.231768651889711,0,1.64834360321323,1.03039244094078,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.0846146078916765,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p5@Foxp1
}}
}}

Latest revision as of 23:56, 1 October 2015

Short description:p5@Foxp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Foxp1_5end
Coexpression cluster:NA
Association with transcript: 99bp_to_ENSMUST00000113322, ENSMUST00000113326_5end
EntrezGene:Foxp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Foxp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.50
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.32
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.78
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.31
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H919.94
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F77.80
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell5.32e-1912
T cell8.75e-1811
pro-T cell8.75e-1811
lymphocyte2.94e-1713
common lymphoid progenitor2.94e-1713
mature alpha-beta T cell3.74e-159
alpha-beta T cell3.74e-159
immature T cell3.74e-159
mature T cell3.74e-159
immature alpha-beta T cell3.74e-159
CD4-positive, alpha-beta T cell1.36e-138
leukocyte2.34e-1217
nongranular leukocyte2.34e-1217
hematopoietic lineage restricted progenitor cell4.68e-1225
hematopoietic cell9.30e-1132
hematopoietic oligopotent progenitor cell9.30e-1132
hematopoietic stem cell9.30e-1132
hematopoietic multipotent progenitor cell9.30e-1132
thymocyte1.45e-106
double negative thymocyte1.45e-106
naive T cell1.45e-106
double-positive, alpha-beta thymocyte1.45e-106
CD4-positive, alpha-beta thymocyte1.45e-106
naive thymus-derived CD4-positive, alpha-beta T cell1.45e-106
DN4 thymocyte1.45e-106
DN1 thymic pro-T cell1.45e-106
DN2 thymocyte1.45e-106
DN3 thymocyte1.45e-106
immature single positive thymocyte1.45e-106
early T lineage precursor1.45e-106
mature CD4 single-positive thymocyte1.45e-106
resting double-positive thymocyte1.45e-106
double-positive blast1.45e-106
CD69-positive double-positive thymocyte1.45e-106
CD69-positive, CD4-positive single-positive thymocyte1.45e-106
CD4-positive, CD8-intermediate double-positive thymocyte1.45e-106
CD24-positive, CD4 single-positive thymocyte1.45e-106

Uber anatomy
Ontology termp-valuen
hemopoietic organ2.61e-1429
immune organ2.61e-1429
subdivision of digestive tract5.38e-13114
gastrointestinal system1.05e-1247
digestive system1.41e-12116
digestive tract1.41e-12116
primitive gut1.41e-12116
intestine2.56e-1231
hemolymphoid system2.95e-1248
immune system2.95e-1248
endoderm-derived structure3.59e-12118
endoderm3.59e-12118
presumptive endoderm3.59e-12118
hematopoietic system5.35e-1245
blood island5.35e-1245
thymus8.61e-1223
neck8.61e-1223
respiratory system epithelium8.61e-1223
hemolymphoid system gland8.61e-1223
pharyngeal epithelium8.61e-1223
thymic region8.61e-1223
pharyngeal gland8.61e-1223
entire pharyngeal arch endoderm8.61e-1223
thymus primordium8.61e-1223
early pharyngeal endoderm8.61e-1223
pharynx3.98e-1124
gland of gut3.98e-1124
upper respiratory tract3.98e-1124
chordate pharynx3.98e-1124
pharyngeal arch system3.98e-1124
pharyngeal region of foregut3.98e-1124
mixed endoderm/mesoderm-derived structure6.15e-1135
segment of respiratory tract1.95e-0927
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