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{{f5samples
{{f5samples
|id=FF:11317-117D3
|DRA_sample_Accession=CAGE@SAMD00005386
|name=Endothelial Cells - Lymphatic, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005386
|sample_id=11317
|accession_numbers=CAGE;DRX008224;DRR009096;DRZ000521;DRZ001906;DRZ011871;DRZ013256
|rna_tube_id=117D3
|accession_numbers_RNASeq=sRNA-Seq;DRX037043;DRR041409;DRZ007051
|rna_box=117
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000055,UBERON:0004111,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002049,UBERON:0007798,UBERON:0001473,UBERON:0002465,UBERON:0004535,UBERON:0004536,UBERON:0006558,UBERON:0002193,UBERON:0002405,UBERON:0001009
|rna_position=D3
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0002138
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=2714
|rna_catalog_number=SC2015
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=fetus
|sample_tissue=lymph node
|sample_donor(cell lot)=
|sample_sex=unknown
|sample_age=fetal
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=endothelial cell, lymphatic
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=0.173
|sample_note=
|profile_hcage=CNhs11901,LSID834,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10004,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000115,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0002078,CL:0002138,CL:0002139,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000055,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000477,UBERON:0000480,UBERON:0001009,UBERON:0001062,UBERON:0001473,UBERON:0002049,UBERON:0002193,UBERON:0002405,UBERON:0002465,UBERON:0004111,UBERON:0004535,UBERON:0004536,UBERON:0006558,UBERON:0007798
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000001,FF:0000049
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000115;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002138;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002139;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001473;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002465;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007798
|ffid_belonging_in_development=CL:0000222,CL:0005022
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
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|rna_box=117
|rna_catalog_number=SC2015
|rna_concentration=0.173
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=2714
|rna_od260/230=
|rna_od260/280=
|rna_position=D3
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=117D3
|rna_weight_ug=10
|rnaseq_library_id=SRhi10004.AGTCAA
|sample_age=fetal
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=endothelial cell, lymphatic
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=fetus
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.39713736439504e-226!GO:0005737;cytoplasm;8.54638735761804e-183!GO:0043226;organelle;3.30577490856841e-177!GO:0043229;intracellular organelle;1.02677210674008e-176!GO:0043231;intracellular membrane-bound organelle;7.1794474999835e-173!GO:0043227;membrane-bound organelle;9.7976678030531e-173!GO:0044444;cytoplasmic part;1.58980421409307e-130!GO:0044422;organelle part;2.46215754478993e-121!GO:0044446;intracellular organelle part;1.02856278746737e-119!GO:0044238;primary metabolic process;6.03711568109805e-81!GO:0005515;protein binding;1.14980421888553e-79!GO:0044237;cellular metabolic process;3.77401700112752e-79!GO:0032991;macromolecular complex;5.32179460098827e-79!GO:0043170;macromolecule metabolic process;2.15177965829965e-76!GO:0030529;ribonucleoprotein complex;1.73416304954132e-66!GO:0005634;nucleus;6.95458269002492e-63!GO:0043233;organelle lumen;7.56999386982715e-63!GO:0031974;membrane-enclosed lumen;7.56999386982715e-63!GO:0044428;nuclear part;1.07222154776639e-61!GO:0003723;RNA binding;2.71591248061424e-61!GO:0005739;mitochondrion;3.09103011374118e-55!GO:0019538;protein metabolic process;4.52180708449322e-52!GO:0031090;organelle membrane;4.52180708449322e-52!GO:0016043;cellular component organization and biogenesis;8.30516175672686e-46!GO:0044260;cellular macromolecule metabolic process;8.30516175672686e-46!GO:0033036;macromolecule localization;1.26877134212747e-45!GO:0015031;protein transport;1.34255541920939e-45!GO:0044267;cellular protein metabolic process;1.34255541920939e-45!GO:0043283;biopolymer metabolic process;3.10587523694444e-43!GO:0045184;establishment of protein localization;1.97490605476938e-42!GO:0008104;protein localization;5.39585275551757e-42!GO:0043234;protein complex;1.17955938062646e-40!GO:0006396;RNA processing;1.37760841401082e-39!GO:0005840;ribosome;1.37534569051226e-38!GO:0031981;nuclear lumen;2.68960094145199e-38!GO:0006412;translation;8.656860744688e-38!GO:0044429;mitochondrial part;7.19825969090654e-37!GO:0031967;organelle envelope;1.28078773222399e-36!GO:0031975;envelope;2.97998208540197e-36!GO:0005829;cytosol;5.56970270167621e-36!GO:0046907;intracellular transport;3.94434801667373e-35!GO:0010467;gene expression;1.30828890847921e-34!GO:0003735;structural constituent of ribosome;1.33185207873122e-33!GO:0016071;mRNA metabolic process;3.41060748278282e-33!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.22069450189907e-32!GO:0009058;biosynthetic process;1.58046173398426e-30!GO:0008380;RNA splicing;4.45966528051374e-30!GO:0009059;macromolecule biosynthetic process;7.11823426803456e-30!GO:0033279;ribosomal subunit;1.72662957976718e-29!GO:0006886;intracellular protein transport;5.51325207878372e-29!GO:0006397;mRNA processing;5.18415041204203e-28!GO:0006996;organelle organization and biogenesis;2.39184545169207e-27!GO:0044249;cellular biosynthetic process;3.40054988375512e-27!GO:0065003;macromolecular complex assembly;1.14715139371781e-26!GO:0000166;nucleotide binding;3.97358891354975e-25!GO:0005740;mitochondrial envelope;6.45269843502814e-25!GO:0005654;nucleoplasm;1.02454874189253e-24!GO:0022607;cellular component assembly;3.56280635325637e-24!GO:0043228;non-membrane-bound organelle;6.02516765622217e-24!GO:0043232;intracellular non-membrane-bound organelle;6.02516765622217e-24!GO:0012505;endomembrane system;6.89480612220981e-24!GO:0051649;establishment of cellular localization;7.90961647046182e-24!GO:0051641;cellular localization;9.42861813160972e-24!GO:0031966;mitochondrial membrane;1.15155663049487e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.80777891781132e-23!GO:0019866;organelle inner membrane;2.96399760509903e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.71242179595476e-22!GO:0016462;pyrophosphatase activity;3.73882562274443e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.12272912399305e-21!GO:0005681;spliceosome;5.04646395810051e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;6.10874298022758e-21!GO:0006119;oxidative phosphorylation;1.46971137707061e-20!GO:0017111;nucleoside-triphosphatase activity;1.87959065423915e-20!GO:0005743;mitochondrial inner membrane;1.9221274649245e-20!GO:0044451;nucleoplasm part;2.16574367617374e-20!GO:0005783;endoplasmic reticulum;2.29239464893826e-20!GO:0016192;vesicle-mediated transport;3.78645391195644e-20!GO:0044445;cytosolic part;2.88618630780251e-19!GO:0005794;Golgi apparatus;3.10832628342186e-19!GO:0032553;ribonucleotide binding;7.51587953092452e-19!GO:0032555;purine ribonucleotide binding;7.51587953092452e-19!GO:0006512;ubiquitin cycle;1.32297190581265e-18!GO:0006457;protein folding;2.12110366297611e-18!GO:0006259;DNA metabolic process;2.31967780639536e-18!GO:0043412;biopolymer modification;2.84991321902641e-18!GO:0017076;purine nucleotide binding;3.27900681413786e-18!GO:0048770;pigment granule;4.95647068333819e-18!GO:0042470;melanosome;4.95647068333819e-18!GO:0016874;ligase activity;7.01797882908037e-18!GO:0044265;cellular macromolecule catabolic process;4.781243842159e-17!GO:0044455;mitochondrial membrane part;1.12853512817043e-16!GO:0003676;nucleic acid binding;1.16600214587743e-16!GO:0008134;transcription factor binding;1.336913708634e-16!GO:0006464;protein modification process;1.50398883180195e-16!GO:0022618;protein-RNA complex assembly;1.64809945407386e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;2.20996790138037e-16!GO:0019941;modification-dependent protein catabolic process;4.15358186675346e-16!GO:0043632;modification-dependent macromolecule catabolic process;4.15358186675346e-16!GO:0015935;small ribosomal subunit;4.85706144475474e-16!GO:0044257;cellular protein catabolic process;5.73420990571803e-16!GO:0044432;endoplasmic reticulum part;6.50109801034762e-16!GO:0006511;ubiquitin-dependent protein catabolic process;7.9385285850514e-16!GO:0043285;biopolymer catabolic process;9.77875948145489e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.55532047660079e-15!GO:0048193;Golgi vesicle transport;3.61110999216498e-15!GO:0009057;macromolecule catabolic process;4.4274030280331e-15!GO:0016070;RNA metabolic process;4.63342633851389e-15!GO:0031980;mitochondrial lumen;7.24502864409867e-15!GO:0005759;mitochondrial matrix;7.24502864409867e-15!GO:0005746;mitochondrial respiratory chain;8.70666614773155e-15!GO:0007049;cell cycle;1.62783848279011e-14!GO:0015934;large ribosomal subunit;2.172671432431e-14!GO:0006605;protein targeting;2.40881329084168e-14!GO:0030163;protein catabolic process;3.4541304805215e-14!GO:0044248;cellular catabolic process;3.64420313422819e-14!GO:0043687;post-translational protein modification;4.58006476703145e-14!GO:0051186;cofactor metabolic process;4.61640028753949e-14!GO:0032559;adenyl ribonucleotide binding;4.72810425891606e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.87194931905764e-14!GO:0005524;ATP binding;5.61963854027034e-14!GO:0005730;nucleolus;8.20184847745136e-14!GO:0030554;adenyl nucleotide binding;2.35741029118972e-13!GO:0008135;translation factor activity, nucleic acid binding;3.00807845794373e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.02702430024414e-12!GO:0003954;NADH dehydrogenase activity;1.02702430024414e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.02702430024414e-12!GO:0005635;nuclear envelope;1.12399276303266e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.0267789850497e-12!GO:0008639;small protein conjugating enzyme activity;3.14792394909166e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.15553479076961e-12!GO:0016604;nuclear body;4.36841670918484e-12!GO:0004842;ubiquitin-protein ligase activity;5.61142492410514e-12!GO:0051082;unfolded protein binding;6.4418820871217e-12!GO:0006974;response to DNA damage stimulus;8.1665435785151e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.1665435785151e-12!GO:0050794;regulation of cellular process;1.32212635915554e-11!GO:0019787;small conjugating protein ligase activity;1.87123111992407e-11!GO:0031965;nuclear membrane;2.22030033648821e-11!GO:0005793;ER-Golgi intermediate compartment;2.67445785998851e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.67445785998851e-11!GO:0042773;ATP synthesis coupled electron transport;2.67445785998851e-11!GO:0005789;endoplasmic reticulum membrane;2.78689383625758e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;3.20124181013094e-11!GO:0000375;RNA splicing, via transesterification reactions;3.20124181013094e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.20124181013094e-11!GO:0003743;translation initiation factor activity;3.44284387180034e-11!GO:0030964;NADH dehydrogenase complex (quinone);6.07094873488379e-11!GO:0045271;respiratory chain complex I;6.07094873488379e-11!GO:0005747;mitochondrial respiratory chain complex I;6.07094873488379e-11!GO:0006732;coenzyme metabolic process;6.1425408253271e-11!GO:0042623;ATPase activity, coupled;6.25560417645055e-11!GO:0012501;programmed cell death;6.9535455474834e-11!GO:0016887;ATPase activity;7.45920066936098e-11!GO:0006915;apoptosis;8.11843127787132e-11!GO:0005761;mitochondrial ribosome;8.63043008727627e-11!GO:0000313;organellar ribosome;8.63043008727627e-11!GO:0006413;translational initiation;9.33437129357334e-11!GO:0022402;cell cycle process;9.42737128672436e-11!GO:0003712;transcription cofactor activity;9.78402142448128e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.11793608939968e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.53782713933453e-10!GO:0044453;nuclear membrane part;2.44728346107105e-10!GO:0006163;purine nucleotide metabolic process;3.00378260439219e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.10711833861331e-10!GO:0009259;ribonucleotide metabolic process;3.27223780655585e-10!GO:0016607;nuclear speck;4.68214979100493e-10!GO:0009150;purine ribonucleotide metabolic process;5.14575389861552e-10!GO:0008565;protein transporter activity;5.54694746733568e-10!GO:0006446;regulation of translational initiation;5.61491046389461e-10!GO:0004386;helicase activity;6.23366571105011e-10!GO:0005768;endosome;6.52672148191092e-10!GO:0016881;acid-amino acid ligase activity;8.41205743626818e-10!GO:0008219;cell death;1.44611592982541e-09!GO:0016265;death;1.44611592982541e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.79996888647423e-09!GO:0009055;electron carrier activity;1.84383779118724e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.27729945390484e-09!GO:0006461;protein complex assembly;2.45073451904466e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.50949064625684e-09!GO:0009144;purine nucleoside triphosphate metabolic process;2.50949064625684e-09!GO:0006164;purine nucleotide biosynthetic process;3.6202203534049e-09!GO:0006913;nucleocytoplasmic transport;3.85477239026344e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.01391994612089e-09!GO:0009141;nucleoside triphosphate metabolic process;4.06518803001287e-09!GO:0006281;DNA repair;4.43323427865697e-09!GO:0031988;membrane-bound vesicle;4.51648369966271e-09!GO:0006793;phosphorus metabolic process;4.82029435699027e-09!GO:0006796;phosphate metabolic process;4.82029435699027e-09!GO:0005773;vacuole;5.3601342293748e-09!GO:0009056;catabolic process;5.70550828874458e-09!GO:0009152;purine ribonucleotide biosynthetic process;6.08993624590743e-09!GO:0016023;cytoplasmic membrane-bound vesicle;6.42441259348433e-09!GO:0051169;nuclear transport;7.91689758726372e-09!GO:0031982;vesicle;1.05692576213066e-08!GO:0003924;GTPase activity;1.26462938494487e-08!GO:0015986;ATP synthesis coupled proton transport;1.27485530813437e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.27485530813437e-08!GO:0009260;ribonucleotide biosynthetic process;1.36775257808442e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.38532017779424e-08!GO:0051726;regulation of cell cycle;1.39611913105783e-08!GO:0031410;cytoplasmic vesicle;1.62484648171542e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.71731426883889e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.71731426883889e-08!GO:0008026;ATP-dependent helicase activity;1.79009760214871e-08!GO:0019829;cation-transporting ATPase activity;1.82146607067931e-08!GO:0044431;Golgi apparatus part;1.88134236037949e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.9670215785451e-08!GO:0048523;negative regulation of cellular process;1.99212672973285e-08!GO:0046034;ATP metabolic process;1.99212672973285e-08!GO:0000074;regulation of progression through cell cycle;2.25011982290299e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.28003927814774e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.33856339362488e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.33856339362488e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.42767992162206e-08!GO:0009719;response to endogenous stimulus;2.44111162782412e-08!GO:0031252;leading edge;2.73996428706785e-08!GO:0016310;phosphorylation;2.77784753671377e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.96438237816527e-08!GO:0042254;ribosome biogenesis and assembly;4.46607850786187e-08!GO:0009060;aerobic respiration;4.80309441425801e-08!GO:0005643;nuclear pore;6.12919657771239e-08!GO:0000323;lytic vacuole;7.6590160351898e-08!GO:0005764;lysosome;7.6590160351898e-08!GO:0005525;GTP binding;1.12266026238611e-07!GO:0050789;regulation of biological process;1.17683644853429e-07!GO:0000278;mitotic cell cycle;1.24635978391308e-07!GO:0030036;actin cytoskeleton organization and biogenesis;1.70664733223776e-07!GO:0006754;ATP biosynthetic process;1.78301683973353e-07!GO:0006753;nucleoside phosphate metabolic process;1.78301683973353e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.99058261881532e-07!GO:0009117;nucleotide metabolic process;2.06797365774118e-07!GO:0045333;cellular respiration;2.07168904400697e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;2.41509469990379e-07!GO:0006403;RNA localization;2.70483591078551e-07!GO:0050657;nucleic acid transport;3.06470579598456e-07!GO:0051236;establishment of RNA localization;3.06470579598456e-07!GO:0050658;RNA transport;3.06470579598456e-07!GO:0005770;late endosome;3.25126906251722e-07!GO:0051276;chromosome organization and biogenesis;3.39439326161235e-07!GO:0006399;tRNA metabolic process;3.69907450255225e-07!GO:0065002;intracellular protein transport across a membrane;3.74114735001495e-07!GO:0030120;vesicle coat;4.29933030857621e-07!GO:0030662;coated vesicle membrane;4.29933030857621e-07!GO:0051188;cofactor biosynthetic process;4.92041659337029e-07!GO:0048519;negative regulation of biological process;4.92041659337029e-07!GO:0016044;membrane organization and biogenesis;4.99230864897051e-07!GO:0032446;protein modification by small protein conjugation;5.24507086813199e-07!GO:0017038;protein import;6.05832722442244e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.24418955044846e-07!GO:0006323;DNA packaging;6.78637798788274e-07!GO:0048475;coated membrane;6.83181151987097e-07!GO:0030117;membrane coat;6.83181151987097e-07!GO:0046930;pore complex;6.93673776292249e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.95465442139115e-07!GO:0016567;protein ubiquitination;9.45200564168731e-07!GO:0000151;ubiquitin ligase complex;1.0034845278189e-06!GO:0044440;endosomal part;1.01769118657443e-06!GO:0010008;endosome membrane;1.01769118657443e-06!GO:0000139;Golgi membrane;1.04735280847498e-06!GO:0016787;hydrolase activity;1.14064021942595e-06!GO:0005788;endoplasmic reticulum lumen;1.18695801299852e-06!GO:0030029;actin filament-based process;1.20097839020391e-06!GO:0006366;transcription from RNA polymerase II promoter;1.2877402158158e-06!GO:0019899;enzyme binding;1.33291414865738e-06!GO:0042981;regulation of apoptosis;1.3963253864975e-06!GO:0005769;early endosome;1.40655785011875e-06!GO:0007264;small GTPase mediated signal transduction;1.43024670717415e-06!GO:0051246;regulation of protein metabolic process;1.46735508877869e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.46735508877869e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.46735508877869e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.46735508877869e-06!GO:0032561;guanyl ribonucleotide binding;1.70144467743149e-06!GO:0019001;guanyl nucleotide binding;1.70144467743149e-06!GO:0043067;regulation of programmed cell death;1.84158312777773e-06!GO:0006099;tricarboxylic acid cycle;2.04472274942217e-06!GO:0046356;acetyl-CoA catabolic process;2.04472274942217e-06!GO:0043038;amino acid activation;2.31415036056898e-06!GO:0006418;tRNA aminoacylation for protein translation;2.31415036056898e-06!GO:0043039;tRNA aminoacylation;2.31415036056898e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.60114114085208e-06!GO:0003713;transcription coactivator activity;3.0469590311249e-06!GO:0045786;negative regulation of progression through cell cycle;3.71508501348706e-06!GO:0043069;negative regulation of programmed cell death;4.23736727626451e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.70177529819804e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.21595177218611e-06!GO:0016740;transferase activity;5.98504131875339e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.9912942254247e-06!GO:0043066;negative regulation of apoptosis;6.02523014866406e-06!GO:0007005;mitochondrion organization and biogenesis;6.77995563342537e-06!GO:0006084;acetyl-CoA metabolic process;7.23154738720602e-06!GO:0051028;mRNA transport;7.53339999383483e-06!GO:0009108;coenzyme biosynthetic process;7.53339999383483e-06!GO:0051187;cofactor catabolic process;7.93039299630564e-06!GO:0007243;protein kinase cascade;8.51238813403229e-06!GO:0006916;anti-apoptosis;9.27388455443825e-06!GO:0005798;Golgi-associated vesicle;1.06958949586813e-05!GO:0005667;transcription factor complex;1.16482175753568e-05!GO:0005694;chromosome;1.16482175753568e-05!GO:0006613;cotranslational protein targeting to membrane;1.16719189652164e-05!GO:0045259;proton-transporting ATP synthase complex;1.25613967058684e-05!GO:0005813;centrosome;1.29219112056109e-05!GO:0004298;threonine endopeptidase activity;1.36557501495076e-05!GO:0006260;DNA replication;1.39509957547761e-05!GO:0007010;cytoskeleton organization and biogenesis;1.57168234472141e-05!GO:0000245;spliceosome assembly;1.63437532052743e-05!GO:0016568;chromatin modification;1.72958191601353e-05!GO:0015630;microtubule cytoskeleton;1.82250123993091e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.86784465284355e-05!GO:0006752;group transfer coenzyme metabolic process;1.94872110370354e-05!GO:0003724;RNA helicase activity;1.96401571182553e-05!GO:0009109;coenzyme catabolic process;2.08686359483451e-05!GO:0008047;enzyme activator activity;2.48585228654868e-05!GO:0051301;cell division;2.66337772583876e-05!GO:0003697;single-stranded DNA binding;2.82121039809586e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.03308787916828e-05!GO:0048471;perinuclear region of cytoplasm;3.03325694678901e-05!GO:0016853;isomerase activity;3.24794020528015e-05!GO:0031968;organelle outer membrane;3.329632532797e-05!GO:0006364;rRNA processing;3.69001743691929e-05!GO:0051170;nuclear import;3.93114293096315e-05!GO:0000087;M phase of mitotic cell cycle;4.57963693571809e-05!GO:0019867;outer membrane;4.799074316094e-05!GO:0030867;rough endoplasmic reticulum membrane;4.97375780305956e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.05327477906404e-05!GO:0016072;rRNA metabolic process;5.1809963504843e-05!GO:0065007;biological regulation;5.54845429685806e-05!GO:0005815;microtubule organizing center;5.92675365626513e-05!GO:0007067;mitosis;6.32687973438819e-05!GO:0006606;protein import into nucleus;6.88729465463541e-05!GO:0008092;cytoskeletal protein binding;7.02309717555042e-05!GO:0016779;nucleotidyltransferase activity;7.63736936350673e-05!GO:0006897;endocytosis;8.36322291281048e-05!GO:0010324;membrane invagination;8.36322291281048e-05!GO:0003714;transcription corepressor activity;8.63182167319844e-05!GO:0006612;protein targeting to membrane;8.76518280526657e-05!GO:0043566;structure-specific DNA binding;8.92863856435705e-05!GO:0016564;transcription repressor activity;9.38800694804031e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;9.47527099383433e-05!GO:0008654;phospholipid biosynthetic process;9.7131292891501e-05!GO:0005096;GTPase activator activity;0.000103038610582531!GO:0022403;cell cycle phase;0.000117218284802075!GO:0016563;transcription activator activity;0.000126979560045949!GO:0006333;chromatin assembly or disassembly;0.000128541682707522!GO:0030133;transport vesicle;0.000136500175014181!GO:0016859;cis-trans isomerase activity;0.000144030127937378!GO:0016491;oxidoreductase activity;0.000146322327790319!GO:0044427;chromosomal part;0.000147655637827333!GO:0019222;regulation of metabolic process;0.000147655637827333!GO:0051427;hormone receptor binding;0.000162564855080064!GO:0005741;mitochondrial outer membrane;0.000164282121849784!GO:0045454;cell redox homeostasis;0.000174267652251049!GO:0033116;ER-Golgi intermediate compartment membrane;0.000175439315502144!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000185740306397473!GO:0015399;primary active transmembrane transporter activity;0.000185740306397473!GO:0042802;identical protein binding;0.000195866036741767!GO:0001726;ruffle;0.000203500660899365!GO:0065004;protein-DNA complex assembly;0.000206409335425397!GO:0043623;cellular protein complex assembly;0.000207396131594011!GO:0005905;coated pit;0.000229153419941801!GO:0009165;nucleotide biosynthetic process;0.00024218695429448!GO:0005885;Arp2/3 protein complex;0.000277643474929426!GO:0015980;energy derivation by oxidation of organic compounds;0.000300026521569608!GO:0035257;nuclear hormone receptor binding;0.000315636545736231!GO:0007265;Ras protein signal transduction;0.000315636545736231!GO:0030027;lamellipodium;0.00033152885612094!GO:0005048;signal sequence binding;0.000347833312423855!GO:0043021;ribonucleoprotein binding;0.000348330480950816!GO:0000785;chromatin;0.000401768881484999!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000415595566054849!GO:0008186;RNA-dependent ATPase activity;0.000422754142047602!GO:0005083;small GTPase regulator activity;0.000514893504282011!GO:0016197;endosome transport;0.000528586543943941!GO:0019843;rRNA binding;0.00054592206438811!GO:0065009;regulation of a molecular function;0.000560773285917137!GO:0008250;oligosaccharyl transferase complex;0.000596103527212547!GO:0005762;mitochondrial large ribosomal subunit;0.000654817345801608!GO:0000315;organellar large ribosomal subunit;0.000654817345801608!GO:0043492;ATPase activity, coupled to movement of substances;0.00071350039666622!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000721264764610653!GO:0048522;positive regulation of cellular process;0.000742373269873067!GO:0051789;response to protein stimulus;0.000782790920616647!GO:0006986;response to unfolded protein;0.000782790920616647!GO:0051087;chaperone binding;0.000786110331487347!GO:0045045;secretory pathway;0.000827141099272502!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000843993335286754!GO:0004576;oligosaccharyl transferase activity;0.000852693362893329!GO:0006091;generation of precursor metabolites and energy;0.000880746723100518!GO:0005774;vacuolar membrane;0.000936444939167917!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000956537249614619!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000990938248758467!GO:0051920;peroxiredoxin activity;0.00101253066465211!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0010625860368365!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00110487642329082!GO:0003729;mRNA binding;0.00111779866505525!GO:0004004;ATP-dependent RNA helicase activity;0.00122168640989249!GO:0030659;cytoplasmic vesicle membrane;0.00124209096252253!GO:0051168;nuclear export;0.00124209096252253!GO:0016363;nuclear matrix;0.00125444470589658!GO:0009967;positive regulation of signal transduction;0.00132838789133723!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00137174827780533!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00140799298969786!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00144796670883702!GO:0007242;intracellular signaling cascade;0.00146483245647755!GO:0015992;proton transport;0.00146923022256246!GO:0006818;hydrogen transport;0.00157159774366717!GO:0000059;protein import into nucleus, docking;0.00165824192075806!GO:0031324;negative regulation of cellular metabolic process;0.00167719231364818!GO:0031902;late endosome membrane;0.00175142032762544!GO:0016126;sterol biosynthetic process;0.00180268936977744!GO:0008139;nuclear localization sequence binding;0.00183369903826183!GO:0031072;heat shock protein binding;0.00197134364406713!GO:0006891;intra-Golgi vesicle-mediated transport;0.00204132911943848!GO:0005099;Ras GTPase activator activity;0.00204706499966589!GO:0005791;rough endoplasmic reticulum;0.00225533472608721!GO:0000314;organellar small ribosomal subunit;0.00226868711641145!GO:0005763;mitochondrial small ribosomal subunit;0.00226868711641145!GO:0030658;transport vesicle membrane;0.00236510030862607!GO:0000279;M phase;0.00237222230198768!GO:0008632;apoptotic program;0.00240028737447069!GO:0007040;lysosome organization and biogenesis;0.00250453445090771!GO:0044433;cytoplasmic vesicle part;0.00257136882197377!GO:0018196;peptidyl-asparagine modification;0.00260852195350482!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00260852195350482!GO:0048500;signal recognition particle;0.00261983393162317!GO:0044437;vacuolar part;0.00263639243874542!GO:0044262;cellular carbohydrate metabolic process;0.00268394015756364!GO:0043681;protein import into mitochondrion;0.00268394015756364!GO:0030663;COPI coated vesicle membrane;0.00269465795130894!GO:0030126;COPI vesicle coat;0.00269465795130894!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00276764683095517!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00276764683095517!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00276764683095517!GO:0030134;ER to Golgi transport vesicle;0.0028450166318188!GO:0006950;response to stress;0.00289533832057271!GO:0006383;transcription from RNA polymerase III promoter;0.00299940336200147!GO:0008361;regulation of cell size;0.00321395598863278!GO:0007006;mitochondrial membrane organization and biogenesis;0.00330727848987483!GO:0006509;membrane protein ectodomain proteolysis;0.0033824274000147!GO:0033619;membrane protein proteolysis;0.0033824274000147!GO:0012506;vesicle membrane;0.00338981816851804!GO:0006402;mRNA catabolic process;0.00342967914555926!GO:0006892;post-Golgi vesicle-mediated transport;0.00362842354227145!GO:0031901;early endosome membrane;0.00363057949821784!GO:0007034;vacuolar transport;0.0036361745963061!GO:0005765;lysosomal membrane;0.00366533163659839!GO:0003899;DNA-directed RNA polymerase activity;0.00369322105302541!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00375519333740516!GO:0004674;protein serine/threonine kinase activity;0.00379524751544015!GO:0030695;GTPase regulator activity;0.00388411408739356!GO:0004177;aminopeptidase activity;0.00451446977414766!GO:0022890;inorganic cation transmembrane transporter activity;0.00457865521871591!GO:0030521;androgen receptor signaling pathway;0.00457953853513148!GO:0033673;negative regulation of kinase activity;0.00458414153675604!GO:0006469;negative regulation of protein kinase activity;0.00458414153675604!GO:0030118;clathrin coat;0.00467384049493739!GO:0009892;negative regulation of metabolic process;0.00467384049493739!GO:0030127;COPII vesicle coat;0.00469768908662737!GO:0012507;ER to Golgi transport vesicle membrane;0.00469768908662737!GO:0016049;cell growth;0.00469949858464924!GO:0046489;phosphoinositide biosynthetic process;0.00471644710914661!GO:0009966;regulation of signal transduction;0.00478845576725643!GO:0051252;regulation of RNA metabolic process;0.00479387222138737!GO:0005819;spindle;0.00480207630172255!GO:0030137;COPI-coated vesicle;0.00491279912750025!GO:0007033;vacuole organization and biogenesis;0.00497311141566928!GO:0051329;interphase of mitotic cell cycle;0.00518673234658276!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00523027881259538!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00526016074129321!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0052654696958653!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00537630343313442!GO:0045047;protein targeting to ER;0.00537630343313442!GO:0006695;cholesterol biosynthetic process;0.00543412334772778!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00553082196870732!GO:0008234;cysteine-type peptidase activity;0.00571438702061188!GO:0007050;cell cycle arrest;0.0057934397908784!GO:0001558;regulation of cell growth;0.0057934397908784!GO:0003779;actin binding;0.00586632463333357!GO:0031625;ubiquitin protein ligase binding;0.00587530907971281!GO:0046474;glycerophospholipid biosynthetic process;0.00588154479195952!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00601238038312087!GO:0006839;mitochondrial transport;0.00633518291474248!GO:0017166;vinculin binding;0.00633518291474248!GO:0030660;Golgi-associated vesicle membrane;0.00635281439375328!GO:0030880;RNA polymerase complex;0.00656811661309014!GO:0003690;double-stranded DNA binding;0.0067776546332502!GO:0006626;protein targeting to mitochondrion;0.00687613547891351!GO:0032940;secretion by cell;0.00698255826565181!GO:0006352;transcription initiation;0.00703613160339563!GO:0051348;negative regulation of transferase activity;0.00722601067101051!GO:0008312;7S RNA binding;0.00806935960715437!GO:0022406;membrane docking;0.00807256966068853!GO:0048278;vesicle docking;0.00807256966068853!GO:0016301;kinase activity;0.00807256966068853!GO:0006414;translational elongation;0.008288018081163!GO:0006401;RNA catabolic process;0.0084456727699789!GO:0035258;steroid hormone receptor binding;0.0084456727699789!GO:0006650;glycerophospholipid metabolic process;0.0084456727699789!GO:0006289;nucleotide-excision repair;0.00847043907734456!GO:0046467;membrane lipid biosynthetic process;0.00892769665235178!GO:0048487;beta-tubulin binding;0.00894332420860935!GO:0016481;negative regulation of transcription;0.00914933523214272!GO:0031323;regulation of cellular metabolic process;0.00923357873818387!GO:0051325;interphase;0.00930708306252123!GO:0030032;lamellipodium biogenesis;0.00931827149900729!GO:0005637;nuclear inner membrane;0.00934146849448405!GO:0050790;regulation of catalytic activity;0.00939676226656729!GO:0007162;negative regulation of cell adhesion;0.00941307320705826!GO:0007266;Rho protein signal transduction;0.00957675128769045!GO:0043488;regulation of mRNA stability;0.00997551364277243!GO:0043487;regulation of RNA stability;0.00997551364277243!GO:0000209;protein polyubiquitination;0.0103537202688865!GO:0030833;regulation of actin filament polymerization;0.0107212440195153!GO:0030041;actin filament polymerization;0.0109316778483741!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0116864500854003!GO:0015002;heme-copper terminal oxidase activity;0.0116864500854003!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0116864500854003!GO:0004129;cytochrome-c oxidase activity;0.0116864500854003!GO:0005869;dynactin complex;0.0118161729632287!GO:0003684;damaged DNA binding;0.0119333733973082!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0121504015113758!GO:0001952;regulation of cell-matrix adhesion;0.012240349602165!GO:0030132;clathrin coat of coated pit;0.012359944455579!GO:0015631;tubulin binding;0.0123958212404685!GO:0007041;lysosomal transport;0.0124627600032796!GO:0005100;Rho GTPase activator activity;0.0125973617595022!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0126136631955139!GO:0000428;DNA-directed RNA polymerase complex;0.0126136631955139!GO:0005938;cell cortex;0.0127413790177977!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0135006213858054!GO:0006904;vesicle docking during exocytosis;0.0137497868852042!GO:0022408;negative regulation of cell-cell adhesion;0.0138344505657803!GO:0006740;NADPH regeneration;0.0139229315395653!GO:0006098;pentose-phosphate shunt;0.0139229315395653!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0141224567389759!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0141224567389759!GO:0030518;steroid hormone receptor signaling pathway;0.0143020188628961!GO:0051540;metal cluster binding;0.0151019912156825!GO:0051536;iron-sulfur cluster binding;0.0151019912156825!GO:0051128;regulation of cellular component organization and biogenesis;0.0151856757811146!GO:0006516;glycoprotein catabolic process;0.0154419785924052!GO:0006497;protein amino acid lipidation;0.0157965639054!GO:0051336;regulation of hydrolase activity;0.0158123231096727!GO:0030384;phosphoinositide metabolic process;0.0160913281112353!GO:0006611;protein export from nucleus;0.0166369772473121!GO:0051539;4 iron, 4 sulfur cluster binding;0.0167623937173!GO:0033093;Weibel-Palade body;0.0169584471783307!GO:0005832;chaperonin-containing T-complex;0.0171481340300963!GO:0016251;general RNA polymerase II transcription factor activity;0.0179255553243894!GO:0000287;magnesium ion binding;0.0179255553243894!GO:0015036;disulfide oxidoreductase activity;0.0180853531819856!GO:0008180;signalosome;0.0180853531819856!GO:0005684;U2-dependent spliceosome;0.0184787219245076!GO:0030119;AP-type membrane coat adaptor complex;0.0184823630942595!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0185758891108979!GO:0003756;protein disulfide isomerase activity;0.0185758891108979!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0185758891108979!GO:0016408;C-acyltransferase activity;0.0187569926533174!GO:0043022;ribosome binding;0.019083283095735!GO:0033130;acetylcholine receptor binding;0.0190996104675186!GO:0006310;DNA recombination;0.0191955803666563!GO:0006350;transcription;0.0195080188966016!GO:0051270;regulation of cell motility;0.0197765757087703!GO:0006334;nucleosome assembly;0.0199026843642509!GO:0035035;histone acetyltransferase binding;0.0199657262388546!GO:0006261;DNA-dependent DNA replication;0.0201375343301073!GO:0000339;RNA cap binding;0.0203637662732338!GO:0006302;double-strand break repair;0.0204638478567453!GO:0044452;nucleolar part;0.0210293674954164!GO:0001953;negative regulation of cell-matrix adhesion;0.0211238654205254!GO:0008154;actin polymerization and/or depolymerization;0.0211764857737978!GO:0006643;membrane lipid metabolic process;0.0212178612300475!GO:0051101;regulation of DNA binding;0.0213630788819354!GO:0043087;regulation of GTPase activity;0.0214547773746705!GO:0040011;locomotion;0.0216105982427702!GO:0000118;histone deacetylase complex;0.021796316626003!GO:0003711;transcription elongation regulator activity;0.0218682499801835!GO:0004197;cysteine-type endopeptidase activity;0.0219804982686579!GO:0007030;Golgi organization and biogenesis;0.0222492788599847!GO:0022415;viral reproductive process;0.0224984819349693!GO:0008610;lipid biosynthetic process;0.0231330714959827!GO:0051287;NAD binding;0.0235342013420267!GO:0006979;response to oxidative stress;0.023576133995573!GO:0031497;chromatin assembly;0.0237959368734195!GO:0045893;positive regulation of transcription, DNA-dependent;0.0238915851994392!GO:0042158;lipoprotein biosynthetic process;0.0238915851994392!GO:0032984;macromolecular complex disassembly;0.0254606422542889!GO:0007021;tubulin folding;0.0255612927850245!GO:0050662;coenzyme binding;0.0258707003580608!GO:0008033;tRNA processing;0.0264183856554662!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0268716595680115!GO:0008022;protein C-terminus binding;0.0273044874973292!GO:0050681;androgen receptor binding;0.0273677030195544!GO:0006595;polyamine metabolic process;0.0275074974670096!GO:0030131;clathrin adaptor complex;0.0275131631571553!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0277985925086742!GO:0047485;protein N-terminus binding;0.0280540686567466!GO:0019904;protein domain specific binding;0.0288852828656526!GO:0040012;regulation of locomotion;0.0293854984607095!GO:0051098;regulation of binding;0.029524493545118!GO:0016601;Rac protein signal transduction;0.0302811335095794!GO:0043433;negative regulation of transcription factor activity;0.0304107497684646!GO:0030031;cell projection biogenesis;0.0308189359273984!GO:0006376;mRNA splice site selection;0.0308426432701978!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0308426432701978!GO:0003678;DNA helicase activity;0.0308803786046267!GO:0033367;protein localization in mast cell secretory granule;0.0308803786046267!GO:0033365;protein localization in organelle;0.0308803786046267!GO:0033371;T cell secretory granule organization and biogenesis;0.0308803786046267!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0308803786046267!GO:0033375;protease localization in T cell secretory granule;0.0308803786046267!GO:0042629;mast cell granule;0.0308803786046267!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0308803786046267!GO:0033364;mast cell secretory granule organization and biogenesis;0.0308803786046267!GO:0033380;granzyme B localization in T cell secretory granule;0.0308803786046267!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0308803786046267!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0308803786046267!GO:0033368;protease localization in mast cell secretory granule;0.0308803786046267!GO:0033366;protein localization in secretory granule;0.0308803786046267!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0308803786046267!GO:0033374;protein localization in T cell secretory granule;0.0308803786046267!GO:0000049;tRNA binding;0.0309413799088575!GO:0048660;regulation of smooth muscle cell proliferation;0.0316372787026846!GO:0043284;biopolymer biosynthetic process;0.031924064155568!GO:0050811;GABA receptor binding;0.0320287228585718!GO:0051059;NF-kappaB binding;0.0322008714907105!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0333390452468613!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0334078230360565!GO:0004563;beta-N-acetylhexosaminidase activity;0.0334078230360565!GO:0043086;negative regulation of catalytic activity;0.0342821432300653!GO:0019902;phosphatase binding;0.0343600837020762!GO:0030125;clathrin vesicle coat;0.0348549938373108!GO:0030665;clathrin coated vesicle membrane;0.0348549938373108!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.035118422982153!GO:0006338;chromatin remodeling;0.0351842851820238!GO:0016272;prefoldin complex;0.0352625002719485!GO:0031529;ruffle organization and biogenesis;0.0354486329494485!GO:0046483;heterocycle metabolic process;0.0357753193564201!GO:0006405;RNA export from nucleus;0.035999383765179!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0366609803644291!GO:0045941;positive regulation of transcription;0.036783608644574!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0370284325832802!GO:0006919;caspase activation;0.0370284325832802!GO:0031418;L-ascorbic acid binding;0.0372563577363774!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0373803973179276!GO:0033043;regulation of organelle organization and biogenesis;0.0373803973179276!GO:0005784;translocon complex;0.0380816697793065!GO:0030984;kininogen binding;0.0381655760418675!GO:0004213;cathepsin B activity;0.0381655760418675!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0383702922675558!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0383869079503767!GO:0003682;chromatin binding;0.0385700156592793!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0388039451075211!GO:0033559;unsaturated fatty acid metabolic process;0.0392165335195929!GO:0006636;unsaturated fatty acid biosynthetic process;0.0392165335195929!GO:0048518;positive regulation of biological process;0.0394652633128272!GO:0031124;mRNA 3'-end processing;0.0394652633128272!GO:0007044;cell-substrate junction assembly;0.0394652633128272!GO:0043624;cellular protein complex disassembly;0.0395392155600091!GO:0030176;integral to endoplasmic reticulum membrane;0.0400353150959811!GO:0000082;G1/S transition of mitotic cell cycle;0.0403713189791128!GO:0010468;regulation of gene expression;0.0412788293881391!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0413600659208994!GO:0016860;intramolecular oxidoreductase activity;0.0413635830822751!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0417763244735083!GO:0006778;porphyrin metabolic process;0.0423240624842984!GO:0033013;tetrapyrrole metabolic process;0.0423240624842984!GO:0001568;blood vessel development;0.0430133218341883!GO:0006644;phospholipid metabolic process;0.0432260431108534!GO:0000776;kinetochore;0.0433851151183648!GO:0016125;sterol metabolic process;0.0435862149555533!GO:0001944;vasculature development;0.0439811990661824!GO:0006672;ceramide metabolic process;0.0439811990661824!GO:0042168;heme metabolic process;0.0439836181220964!GO:0042585;germinal vesicle;0.0440845850516778!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0450801494440228!GO:0010257;NADH dehydrogenase complex assembly;0.0450801494440228!GO:0033108;mitochondrial respiratory chain complex assembly;0.0450801494440228!GO:0043241;protein complex disassembly;0.0450801494440228!GO:0006378;mRNA polyadenylation;0.0456005061761069!GO:0000075;cell cycle checkpoint;0.0467951331433287!GO:0008538;proteasome activator activity;0.0468140562010932!GO:0046966;thyroid hormone receptor binding;0.0468140562010932!GO:0008637;apoptotic mitochondrial changes;0.0469744779435369!GO:0022407;regulation of cell-cell adhesion;0.0469886545742242!GO:0008097;5S rRNA binding;0.0474695850833267!GO:0009116;nucleoside metabolic process;0.0478130182440839!GO:0043495;protein anchor;0.0483964487431591!GO:0006739;NADP metabolic process;0.0483964487431591!GO:0030742;GTP-dependent protein binding;0.0485873807128145!GO:0030522;intracellular receptor-mediated signaling pathway;0.0494898703737574!GO:0005874;microtubule;0.0495726006804874!GO:0031272;regulation of pseudopodium formation;0.0499937312989117!GO:0031269;pseudopodium formation;0.0499937312989117!GO:0031344;regulation of cell projection organization and biogenesis;0.0499937312989117!GO:0031268;pseudopodium organization and biogenesis;0.0499937312989117!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0499937312989117!GO:0031274;positive regulation of pseudopodium formation;0.0499937312989117
|sample_id=11317
|sample_note=
|sample_sex=unknown
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=lymph node
|top_motifs=FOX{I1,J2}:1.93744873705;PAX6:1.66442804053;SREBF1,2:1.57459360664;NFATC1..3:1.54313411048;SOX5:1.43174097548;SOX{8,9,10}:1.41230232396;RXR{A,B,G}:1.38946555438;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.34184006581;TEF:1.25379597279;SOX2:1.24828556886;IKZF2:1.19195023897;PAX1,9:1.08405217384;SPZ1:1.06750160641;TLX1..3_NFIC{dimer}:1.06664180906;HBP1_HMGB_SSRP1_UBTF:1.00814118395;POU3F1..4:0.991538347194;ARID5B:0.956571114249;bHLH_family:0.909329225415;ADNP_IRX_SIX_ZHX:0.872897511774;ZFP161:0.822762687176;FOXQ1:0.800504763483;ELF1,2,4:0.798280895116;STAT1,3:0.787763597281;LEF1_TCF7_TCF7L1,2:0.714811397888;ETS1,2:0.696055363655;AR:0.649366678018;TFAP4:0.636718621275;NR3C1:0.619331855853;STAT2,4,6:0.602025277537;HOXA9_MEIS1:0.601674445755;LHX3,4:0.562989191997;TFAP2{A,C}:0.551315988615;TEAD1:0.540365659452;GATA6:0.528109398241;SPIB:0.523075804857;XCPE1{core}:0.522081315234;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.522018104446;RBPJ:0.520429602596;ALX1:0.520407661679;FOX{D1,D2}:0.506976081673;SOX17:0.505340519934;TAL1_TCF{3,4,12}:0.494842012876;FOXD3:0.491150281024;NRF1:0.491081294285;PAX5:0.460346506516;TP53:0.454735228677;EVI1:0.453435301591;GZF1:0.442172894143;SP1:0.432752267388;PDX1:0.414703991348;EN1,2:0.363012579678;EGR1..3:0.334262835468;GFI1B:0.323601283115;TGIF1:0.301314750964;PRDM1:0.30077437801;FOX{F1,F2,J1}:0.296111893259;IKZF1:0.291905625449;TFDP1:0.287896238435;IRF1,2:0.285647999534;FOXN1:0.282070647324;NKX2-3_NKX2-5:0.279890097858;HAND1,2:0.27706262874;HMGA1,2:0.240537411042;GCM1,2:0.233595288768;PAX2:0.216206747211;CDC5L:0.215879849261;ZBTB16:0.215242421539;MED-1{core}:0.185485430175;NANOG:0.165905588841;NFE2:0.151736111945;ZNF143:0.131339575716;SPI1:0.11457475117;DMAP1_NCOR{1,2}_SMARC:0.107973039148;CRX:0.106471200915;HIC1:0.103599931761;FOXP1:0.0910975840871;ZBTB6:0.0768704000109;MAZ:0.0728173282116;MYOD1:0.0717624973138;MTE{core}:0.0637298363842;YY1:0.0595484149187;ONECUT1,2:0.0588687907268;TFAP2B:0.0500677696759;BPTF:0.0498531360962;BACH2:0.0370155061906;ATF2:0.0357394946626;NANOG{mouse}:0.0348978739488;PITX1..3:0.0331975376275;FOSL2:0.0307922306315;HNF4A_NR2F1,2:0.0161043239077;POU1F1:-0.0142560325969;NFIX:-0.0191974665413;NFY{A,B,C}:-0.0230438376767;NR5A1,2:-0.0260277795136;FOXA2:-0.0599544552969;CREB1:-0.0623061903468;SMAD1..7,9:-0.0688297403686;EP300:-0.0751581671031;AIRE:-0.0805890407964;NHLH1,2:-0.0831044718533;FOS_FOS{B,L1}_JUN{B,D}:-0.0837881315877;NFKB1_REL_RELA:-0.0941154706385;TLX2:-0.113405775251;GFI1:-0.123707044474;GTF2I:-0.133234037995;SRF:-0.137528489342;LMO2:-0.138685561187;POU6F1:-0.139085142183;REST:-0.142353486102;CUX2:-0.14483027097;NFE2L2:-0.148940117125;NKX2-2,8:-0.160520594491;HNF1A:-0.160906589075;MEF2{A,B,C,D}:-0.162439121166;PAX3,7:-0.16319269344;MZF1:-0.165711011045;FOXL1:-0.186970719276;IRF7:-0.204053065578;PBX1:-0.20596383934;GATA4:-0.226102862209;MYB:-0.227088311576;UFEwm:-0.230656731766;PATZ1:-0.242495961768;HSF1,2:-0.247168703429;ZIC1..3:-0.261938876275;PRRX1,2:-0.263772998726;FOXO1,3,4:-0.264519723203;GTF2A1,2:-0.27046623034;CDX1,2,4:-0.279944721894;MYFfamily:-0.293096870878;PAX8:-0.295659988457;RFX1:-0.307027416763;HIF1A:-0.309253702522;AHR_ARNT_ARNT2:-0.338826094409;NR1H4:-0.340481477707;NKX6-1,2:-0.36655697235;STAT5{A,B}:-0.399031075887;E2F1..5:-0.404412910854;ATF6:-0.426146832351;HLF:-0.426551763295;ELK1,4_GABP{A,B1}:-0.427499323902;RORA:-0.444079779814;PPARG:-0.467025465459;NFE2L1:-0.471997825618;ZNF238:-0.475493973801;ZNF148:-0.515689044768;MTF1:-0.539348532403;ESRRA:-0.547175026887;OCT4_SOX2{dimer}:-0.565536910191;XBP1:-0.579104370626;CEBPA,B_DDIT3:-0.580716065423;HMX1:-0.582532213774;ATF4:-0.591051575591;MYBL2:-0.592586548021;RREB1:-0.597207769397;JUN:-0.600090183009;TOPORS:-0.601941183499;HOX{A5,B5}:-0.614971419112;NKX2-1,4:-0.618636289804;HES1:-0.621540339953;TBP:-0.631403502823;GLI1..3:-0.643247025878;RUNX1..3:-0.64698808969;TFCP2:-0.654262127332;SNAI1..3:-0.67419792344;ALX4:-0.69599452105;EBF1:-0.720804723022;PAX4:-0.729343108071;FOXP3:-0.72981091294;ATF5_CREB3:-0.739288011905;NKX3-2:-0.793040307533;ZNF423:-0.804213337931;VSX1,2:-0.807277835438;ESR1:-0.81414705334;NKX3-1:-0.824071276708;POU5F1:-0.833528366695;MAFB:-0.836362170084;BREu{core}:-0.852302682113;T:-0.85376832776;HOX{A4,D4}:-0.865965621893;KLF4:-0.888845697393;ZEB1:-0.889280198739;FOXM1:-0.9259636315;ZNF384:-0.931418863196;TBX4,5:-0.937105537063;NR6A1:-0.954052551081;NFIL3:-1.00306747642;RFX2..5_RFXANK_RFXAP:-1.05999752659;DBP:-1.12183365326;HOX{A6,A7,B6,B7}:-1.17732599926;RXRA_VDR{dimer}:-1.18226987381;POU2F1..3:-1.46704328031
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11317-117D3;search_select_hide=table117:FF:11317-117D3
}}
}}

Latest revision as of 16:33, 3 June 2020

Name:Endothelial Cells - Lymphatic, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11901
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuelymph node
dev stagefetus
sexunknown
agefetal
cell typeendothelial cell, lymphatic
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2714
catalog numberSC2015
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005386
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11901 CAGE DRX008224 DRR009096
Accession ID Hg19

Library idBAMCTSS
CNhs11901 DRZ000521 DRZ001906
Accession ID Hg38

Library idBAMCTSS
CNhs11901 DRZ011871 DRZ013256
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005386
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10004.AGTCAA sRNA-Seq DRX037043 DRR041409
Accession ID Hg19

Library idBAMCTSS
SRhi10004.AGTCAA DRZ007051


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.106
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0905
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen1.054
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.315
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.035
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.174
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0447
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.119
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.452
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.035
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.213
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.459
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.132
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11901

Jaspar motifP-value
MA0002.20.00749
MA0003.10.203
MA0004.10.121
MA0006.10.483
MA0007.10.85
MA0009.10.123
MA0014.10.969
MA0017.10.109
MA0018.28.3477e-4
MA0019.10.147
MA0024.10.148
MA0025.10.108
MA0027.10.92
MA0028.10.945
MA0029.10.677
MA0030.10.105
MA0031.10.079
MA0035.20.406
MA0038.10.933
MA0039.20.609
MA0040.10.359
MA0041.10.0302
MA0042.10.0676
MA0043.19.95606e-5
MA0046.10.392
MA0047.20.0137
MA0048.10.392
MA0050.10.0183
MA0051.17.23659e-4
MA0052.10.86
MA0055.10.465
MA0057.10.462
MA0058.10.00929
MA0059.10.448
MA0060.10.944
MA0061.10.0285
MA0062.20.824
MA0065.20.00241
MA0066.10.216
MA0067.10.479
MA0068.10.515
MA0069.10.107
MA0070.10.295
MA0071.10.133
MA0072.10.637
MA0073.10.311
MA0074.10.917
MA0076.10.58
MA0077.16.20162e-6
MA0078.10.123
MA0079.20.366
MA0080.27.64063e-4
MA0081.10.109
MA0083.10.344
MA0084.10.0187
MA0087.10.0531
MA0088.10.924
MA0090.10.183
MA0091.10.389
MA0092.10.13
MA0093.10.0774
MA0099.20.0141
MA0100.10.786
MA0101.10.382
MA0102.20.0504
MA0103.10.00534
MA0104.20.281
MA0105.10.00348
MA0106.10.00515
MA0107.10.507
MA0108.20.00349
MA0111.10.78
MA0112.20.00145
MA0113.10.854
MA0114.10.0219
MA0115.10.0336
MA0116.12.06051e-5
MA0117.10.12
MA0119.10.16
MA0122.10.368
MA0124.10.538
MA0125.10.695
MA0131.10.162
MA0135.10.169
MA0136.10.0546
MA0137.20.332
MA0138.20.202
MA0139.10.746
MA0140.10.101
MA0141.10.398
MA0142.10.0935
MA0143.10.422
MA0144.10.414
MA0145.10.891
MA0146.10.0533
MA0147.10.19
MA0148.10.00385
MA0149.10.231
MA0150.10.549
MA0152.10.872
MA0153.10.859
MA0154.10.00438
MA0155.10.944
MA0156.10.00371
MA0157.10.228
MA0159.10.874
MA0160.10.439
MA0162.10.668
MA0163.17.38857e-4
MA0164.10.396
MA0258.10.0622
MA0259.10.573



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11901

Novel motifP-value
10.246
100.12
1000.787
1010.664
1020.556
1030.349
1040.407
1050.248
1060.0166
1070.559
1080.808
1090.171
110.263
1100.66
1110.827
1120.335
1130.4
1140.558
1150.0526
1160.00774
1170.723
1180.628
1190.447
120.485
1200.939
1210.748
1220.848
1230.445
1240.111
1250.953
1260.346
1270.0593
1280.227
1290.633
130.719
1300.595
1310.593
1320.279
1330.565
1340.625
1350.154
1360.293
1370.432
1380.162
1390.607
140.691
1400.0876
1410.719
1420.0152
1430.515
1440.202
1450.536
1460.91
1470.461
1480.218
1490.362
150.42
1500.82
1510.518
1520.371
1530.146
1540.556
1550.159
1560.0798
1570.33
1580.316
1590.157
160.148
1600.774
1610.0378
1620.262
1630.771
1640.813
1650.939
1660.677
1670.289
1680.902
1690.791
170.384
180.0257
190.221
20.349
200.229
210.906
220.499
230.703
240.348
250.213
260.0351
270.473
280.5
290.339
30.475
300.421
310.257
320.027
330.744
340.902
350.321
360.199
370.715
380.848
390.0952
40.0204
400.695
410.437
420.712
430.098
440.074
450.739
460.116
470.25
480.52
490.08
50.885
500.813
510.564
520.296
530.464
540.615
550.911
560.489
570.966
580.0411
590.145
60.294
600.0605
610.761
620.0102
630.278
640.0422
650.292
660.752
670.595
680.939
690.356
70.474
700.0327
710.117
720.546
730.251
740.487
750.707
760.861
770.164
780.571
790.631
80.315
800.434
810.226
820.291
830.512
840.745
850.0723
860.948
870.819
880.179
890.241
90.338
900.269
910.397
920.144
930.193
940.233
950.8
960.799
970.264
980.509
990.881



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11901


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0002138 (endothelial cell of lymphatic vessel)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000055 (vessel)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002049 (vasculature)
0007798 (vascular system)
0001473 (lymphatic vessel)
0002465 (lymphoid system)
0004535 (cardiovascular system)
0004536 (lymph vasculature)
0006558 (lymphatic part of lymphoid system)
0002193 (hemolymphoid system)
0002405 (immune system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000001 (sample)
0000049 (human lymphatic endothelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)
CL:0005022 (vascular lymphangioblast)

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