FF:10069-101I6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005626 | ||
|accession_numbers=CAGE;DRX008642;DRR009514;DRZ000939;DRZ002324;DRZ012289;DRZ013674 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0001134,UBERON:0002100,UBERON:0000479,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002426,UBERON:0003831,UBERON:0003898,UBERON:0004830,UBERON:0002036,UBERON:0002385,UBERON:0005090,UBERON:0001630,UBERON:0005177,UBERON:0003830,UBERON:0005175,UBERON:0001774,UBERON:0005181,UBERON:0010317,UBERON:0001015,UBERON:0001103,UBERON:0001004,UBERON:0002204,UBERON:0001443,UBERON:0000383,UBERON:0000915 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010069 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/diaphragm%252c%2520fetal%252c%2520donor1.CNhs11779.10069-101I6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/diaphragm%252c%2520fetal%252c%2520donor1.CNhs11779.10069-101I6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/diaphragm%252c%2520fetal%252c%2520donor1.CNhs11779.10069-101I6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/diaphragm%252c%2520fetal%252c%2520donor1.CNhs11779.10069-101I6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/diaphragm%252c%2520fetal%252c%2520donor1.CNhs11779.10069-101I6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10069-101I6 | |id=FF:10069-101I6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010069 | ||
|is_obsolete= | |||
|library_id=CNhs11779 | |||
|library_id_phase_based=2:CNhs11779 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10069 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10069 | |||
|name=diaphragm, fetal, donor1 | |name=diaphragm, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11779,LSID820,release009,COMPLETED | |profile_hcage=CNhs11779,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,1.33978957892095,0,0.0955759512479895,0,0.840399819340344,0.230882104788498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761717780683654,0,0,0,0.266232776262519,0,0.317875720648325,0,0,0.28287702713752,0,0,0,0,0,0,0,0,0,0,0,0,0.556524831050255,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.115466508621447,0,0.723737258222308,0,0,0.158550354121279,0,0,0,0,0,0,0,0,0.415833616916382,0,0,0,0,0,0,0,0,0.0888450202374134,0,0,0,0,0,0.123524263458608,0.257630322584971,0.266232776262519,0.255893981334376,0.166877681465973,0.0774112651017618,0.138846608316518,0,0.415833616916382,0,0,0.157858630096669,0.479804417389752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0315733967447268,0,0,0,0.584121778694443,0.453878892135117,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0.700088022024775,0,0,0.157858630096669,0,0,0,0,0,0.532465552525037,0,0.415833616916382,0.415833616916382,0,0,0.285286677239473,0,0.290498293546457,-0.143515142523472,0.127946990667188,0,0.0079410438334135,0,0.532465552525037,0,0,0,0.255893981334376,0,0,0,0.127774114381811,0,1.16041342688484,0,0,0.255893981334376,0,0.0545220850758365,0.752707322820366,0,-0.046311070482322,0.464121291447669,0,0.124474775189016,0,0,-0.062323860876133,0,0.294954133122642,-0.0827201683234173,0.659968734718359,0.273302881122413,0.200181484553194,0,0,0,0.0163891245594527,-0.762484932058513,0,0,0.272399915177833,0.459883037471969,0,0,1.6695249376113,0,0.213861033928707,0.0675072487703175,0,0.247954847591855,0,0,0,0,0,0,0,0,0,0,0,0.766305310578296,0.0888450202374134,0,0,0.255893981334376,0.059715093335567,0.356558472507083,0,0.0139671962915228,0.391298356341898,0.123524263458608,0.0064065506447457,-0.299881046284232,0,0.230075825515124,0.226330457328459,0.482673840520724,0.0774112651017618,0.108492131963237,0.225851897366535,0,0.355767889695546,0.424553349360144,0.0923758438384997,0.0547049908108104,0.137375621251159,0.207688218386544,0.110378237684895,0,0,0.347352723225268,0.423683423866781,0.0277852920346326,0,0.134199419885794,0.0487853962645698,0.17479490661973,0.503643590465126,0.0193593192444464,-0.409350153596465,0.625904675517561,0.166877681465973,0.138006415499917,0.67542277695859,0.0856863525911604,0.255893981334376,0.165789809372383,-0.0197637466469731,0.0845281543786456,0.0842618488460958,0,0.574202091907792,0.347489355839014,0.127946990667188,0.156749943955609,0.352969536589884,0,0,0.121310791153363,0,0.302038401349999,-0.00883205743426363,0,0.624314134362568,-0.0429902765678976,0.225092369268299,-0.232855561555545,0,-0.024084560440813,0,0.085006175796646,0.0544223601075936,0.214234880320647,0.273567747474186,-0.072846300774436,0.229499796316093,0.028107525842592,-0.0381098186379379,0.1240677505168,0.174964015686743,0.277693216633037,-0.0584468268118252,0.296099396955149,0.406852465796108,-0.00184792677390511,0.399887346313984,0.0892570033548175,0.327706784441095,0.255893981334376,0.257630322584971,0.43573498592491,0.188259014650573,0.262055036245869,0.255893981334376,0.0727897712779957,1.05817955371877,0.393652520443136,0,0.285688251403078,0.517745802245533,0.587281956150194,-0.028594927811832,0,0.344237533012154,1.32919863185703,0.132282948118579,0.143449243744402,0.214741727242297,0,0.265466533581743,0.294784829414691,0.520685839297031,0.0689273517789963,0,0.297562400025235,0,0,0.260521519622187,0.0204179435699869,0,0.132896638687716,0.0908851078113787,0.536959031908056,-0.115971073434934,0.255893981334376,0,0.11888417430574,0,0.700088022024775,0.625835874065055,0.255893981334376,0.20094629550628,-0.253326341486756,0.0675770142141615,1.14999121327882,0,0,0.0783662153692,0.255893981334376,0.0429549186792324,0,0,-0.121934305931636,-0.116628112990133,0,0,0,0.0314462965946427,0,0,0,0,0,0,0.00975295323312094,0.59111658829456,-0.354833330216448,0.415833616916382,-0.0779442369691411,0,0,0,0.415833616916382,0,0,0.0374109803556681,0.624314134362568,0.0384430895794103,0.223927934256444,-0.12301741567642,0,0,0,0,0.200110214362908,0.329228990430313,0,0.124031274836744,0,0.312157067181284,0,0,-0.0861409897892114,0,0,0,0,0.198163524280712,0.101103596173874,0,0,0,0.543775217863123,0,0,0,0.0863643919723296,-0.0158260609526633,0,0,0,0.00245034620876045,0.112424527290268,-0.0815818795468414,0,-0.293892265123224,-0.556011766161008,0.0301692382724887,0,0.255893981334376,0.694137442048574,0,0,0.0516982367816445,0,0.415833616916382,0.0805868182563875,0.255893981334376,0,0.255893981334376,0,0.0683643949916225,0,0.201519104516627,0,0,0.0462955931367057,0,0,0.624314134362568,0,0,0,0,0,0.0902861041842997,0.163669924675865,0.255893981334376,0,0,0,0,0,0,0.231787958255472,0.339768129767993,0,0,0,0,0,0.415833616916382,0,0,0.228662082361533,0,0,0,0,0,0.723737258222308,0,0,0,0,0.461764209576997,0,0,0.83787098535292,0,0,0,0,0,0,0,0.0700666082097403,0,0,0,0,0,-0.123319086035448,1.002145705069,0,0,0,0,0,0,0,0.840399819340344,0,0,0,0,0.301949243207405,0,0,0,0.151097596545219,0,0.0955759512479895,1.33978957892095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0950291290617138,0,0.459512866430102,0.155016590396948,0,0,-0.0247115441748505,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0348580438050884,0,0,0,0,0,0,0,0.317875720648325,0,0,0.220124257380758,0,0,0,0,0,0,0.147243290086275,0.306988664784276,0.0782594699457143,0,0,1.94289254618609,0.201508408851921,0,0,0.110617997828369,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761717780683654,0,0,0,0,0,0,0,0,0,0,0,0,0.127946990667188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939356273917715,0.255893981334376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175875513065737,0,0,0,0.551498282641421,0,0,0,0,0,0,0,0,0.415833616916382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550055706888067,0,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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:RtHFN: Diaphragm | |rna_catalog_number=Cat:RtHFN: Diaphragm | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=A? | |sample_ethnicity=A? | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.07770891126956e-217!GO:0005737;cytoplasm;6.13775536693216e-189!GO:0043226;organelle;4.34625868067058e-140!GO:0043229;intracellular organelle;7.54123830764153e-140!GO:0044444;cytoplasmic part;1.83292410975576e-131!GO:0043231;intracellular membrane-bound organelle;2.06383883245416e-115!GO:0043227;membrane-bound organelle;2.20926103039722e-115!GO:0005515;protein binding;2.3648588974796e-94!GO:0044422;organelle part;3.85121935532132e-91!GO:0044446;intracellular organelle part;6.71143547717369e-90!GO:0032991;macromolecular complex;5.28555180528782e-76!GO:0005739;mitochondrion;1.48739134400835e-66!GO:0030529;ribonucleoprotein complex;7.75531660884978e-53!GO:0044238;primary metabolic process;1.03385579733847e-49!GO:0044237;cellular metabolic process;2.62948325627904e-49!GO:0044429;mitochondrial part;3.7376958551008e-47!GO:0043170;macromolecule metabolic process;4.04885073090623e-47!GO:0043233;organelle lumen;9.46004849224138e-47!GO:0031974;membrane-enclosed lumen;9.46004849224138e-47!GO:0019538;protein metabolic process;1.71319364785618e-43!GO:0003723;RNA binding;2.10303056407504e-43!GO:0043234;protein complex;4.20372461177618e-43!GO:0016043;cellular component organization and biogenesis;9.75544569566587e-40!GO:0031967;organelle envelope;1.44786161703579e-39!GO:0031975;envelope;1.9849914360972e-39!GO:0005840;ribosome;1.36926801881306e-38!GO:0044260;cellular macromolecule metabolic process;3.21064081391958e-38!GO:0044267;cellular protein metabolic process;2.92364559484475e-36!GO:0031090;organelle membrane;2.05901217411507e-34!GO:0006412;translation;4.19106106757092e-34!GO:0003735;structural constituent of ribosome;6.47205835516743e-34!GO:0044428;nuclear part;8.12747468652519e-34!GO:0005634;nucleus;1.27636050291769e-33!GO:0043228;non-membrane-bound organelle;4.86128232035344e-31!GO:0043232;intracellular non-membrane-bound organelle;4.86128232035344e-31!GO:0005740;mitochondrial envelope;1.38996285859419e-30!GO:0031966;mitochondrial membrane;2.36792016662776e-30!GO:0033279;ribosomal subunit;1.29094671491014e-29!GO:0019866;organelle inner membrane;4.00845589038087e-29!GO:0005829;cytosol;1.36772524996194e-28!GO:0005743;mitochondrial inner membrane;8.31493257985209e-28!GO:0033036;macromolecule localization;2.69935035877107e-26!GO:0015031;protein transport;5.51135933619215e-26!GO:0044249;cellular biosynthetic process;6.57403746896567e-26!GO:0009059;macromolecule biosynthetic process;1.47135887721284e-25!GO:0046907;intracellular transport;1.39704905175046e-24!GO:0008104;protein localization;2.84198186876046e-24!GO:0045184;establishment of protein localization;3.75811941964977e-24!GO:0022607;cellular component assembly;6.54347235318671e-24!GO:0009058;biosynthetic process;6.87089212130924e-24!GO:0065003;macromolecular complex assembly;8.89649951462849e-24!GO:0006119;oxidative phosphorylation;3.53993210887293e-23!GO:0016071;mRNA metabolic process;3.53993210887293e-23!GO:0008092;cytoskeletal protein binding;5.64110960791646e-23!GO:0044455;mitochondrial membrane part;9.54269958978106e-23!GO:0008380;RNA splicing;6.86398751206676e-22!GO:0005746;mitochondrial respiratory chain;8.38894607942665e-22!GO:0031980;mitochondrial lumen;3.05519542810353e-21!GO:0005759;mitochondrial matrix;3.05519542810353e-21!GO:0006396;RNA processing;7.59226192104339e-21!GO:0006886;intracellular protein transport;1.03373259419395e-20!GO:0043283;biopolymer metabolic process;1.08649840479564e-20!GO:0031981;nuclear lumen;7.23531104565498e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.71212888175846e-19!GO:0015629;actin cytoskeleton;2.69175675380094e-19!GO:0010467;gene expression;2.9739470177815e-19!GO:0050136;NADH dehydrogenase (quinone) activity;1.13399182065937e-18!GO:0003954;NADH dehydrogenase activity;1.13399182065937e-18!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.13399182065937e-18!GO:0006397;mRNA processing;1.26833675871998e-18!GO:0044449;contractile fiber part;2.1456702057957e-18!GO:0006996;organelle organization and biogenesis;6.41054977998684e-18!GO:0043292;contractile fiber;9.34297060033285e-18!GO:0044445;cytosolic part;2.01773014588472e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.13042403380312e-17!GO:0042775;organelle ATP synthesis coupled electron transport;2.17918221261353e-16!GO:0042773;ATP synthesis coupled electron transport;2.17918221261353e-16!GO:0030964;NADH dehydrogenase complex (quinone);2.71428199642538e-16!GO:0045271;respiratory chain complex I;2.71428199642538e-16!GO:0005747;mitochondrial respiratory chain complex I;2.71428199642538e-16!GO:0015935;small ribosomal subunit;3.46292083198564e-16!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.89864312879404e-16!GO:0003779;actin binding;3.32974942304726e-15!GO:0000166;nucleotide binding;4.21523459950126e-15!GO:0008134;transcription factor binding;5.54510618523618e-15!GO:0030016;myofibril;6.53218373403824e-15!GO:0008307;structural constituent of muscle;1.19383834151673e-14!GO:0015934;large ribosomal subunit;1.41063148274415e-14!GO:0007517;muscle development;2.30034121330105e-14!GO:0051641;cellular localization;2.30034121330105e-14!GO:0051649;establishment of cellular localization;3.59294183459916e-14!GO:0005681;spliceosome;7.27832166379532e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.52968463984672e-14!GO:0006512;ubiquitin cycle;8.1032049616718e-14!GO:0005761;mitochondrial ribosome;1.03413145360918e-13!GO:0000313;organellar ribosome;1.03413145360918e-13!GO:0005783;endoplasmic reticulum;1.03599397140819e-13!GO:0048770;pigment granule;1.37603152140164e-13!GO:0042470;melanosome;1.37603152140164e-13!GO:0005654;nucleoplasm;2.69839540727685e-13!GO:0008135;translation factor activity, nucleic acid binding;2.70510575882811e-13!GO:0030017;sarcomere;3.77065165546688e-13!GO:0022618;protein-RNA complex assembly;4.63345816803374e-13!GO:0043412;biopolymer modification;6.86632943076373e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.90718378148193e-13!GO:0051186;cofactor metabolic process;9.28718862297948e-13!GO:0016192;vesicle-mediated transport;9.53186457513594e-13!GO:0043687;post-translational protein modification;1.09879413197392e-12!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.93355490275473e-12!GO:0006464;protein modification process;3.89561067653875e-12!GO:0006605;protein targeting;4.49895845201753e-12!GO:0005794;Golgi apparatus;5.8357491697824e-12!GO:0006457;protein folding;7.9594782388913e-12!GO:0048523;negative regulation of cellular process;1.24865779798573e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;1.3364957302996e-11!GO:0048193;Golgi vesicle transport;1.45571213965484e-11!GO:0044451;nucleoplasm part;1.68474485942211e-11!GO:0030029;actin filament-based process;1.82716025428332e-11!GO:0030036;actin cytoskeleton organization and biogenesis;2.11410188623866e-11!GO:0019941;modification-dependent protein catabolic process;2.4948165318674e-11!GO:0043632;modification-dependent macromolecule catabolic process;2.4948165318674e-11!GO:0009055;electron carrier activity;2.79053664274276e-11!GO:0006511;ubiquitin-dependent protein catabolic process;2.79053664274276e-11!GO:0015980;energy derivation by oxidation of organic compounds;3.22370084390244e-11!GO:0044257;cellular protein catabolic process;4.10939542097799e-11!GO:0045333;cellular respiration;7.93061905890466e-11!GO:0044265;cellular macromolecule catabolic process;9.25475756839478e-11!GO:0006461;protein complex assembly;1.01192047829612e-10!GO:0016874;ligase activity;1.25835651513883e-10!GO:0006793;phosphorus metabolic process;2.35200566600261e-10!GO:0006796;phosphate metabolic process;2.35200566600261e-10!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.78000761202363e-10!GO:0017076;purine nucleotide binding;3.17125948883122e-10!GO:0017111;nucleoside-triphosphatase activity;3.3275734593566e-10!GO:0016817;hydrolase activity, acting on acid anhydrides;3.52806942166148e-10!GO:0016462;pyrophosphatase activity;3.60780320486441e-10!GO:0012505;endomembrane system;3.60780320486441e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.16961322538235e-10!GO:0009060;aerobic respiration;4.37782817113583e-10!GO:0032553;ribonucleotide binding;4.45555989073838e-10!GO:0032555;purine ribonucleotide binding;4.45555989073838e-10!GO:0048519;negative regulation of biological process;4.78643674504872e-10!GO:0000502;proteasome complex (sensu Eukaryota);6.35530258032798e-10!GO:0005635;nuclear envelope;9.69910028041601e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.1824411048579e-09!GO:0006913;nucleocytoplasmic transport;1.21274978344844e-09!GO:0008565;protein transporter activity;1.28344672447941e-09!GO:0051082;unfolded protein binding;1.31217720926793e-09!GO:0006413;translational initiation;2.48796379089294e-09!GO:0006732;coenzyme metabolic process;2.50978693844033e-09!GO:0051169;nuclear transport;2.74958097312558e-09!GO:0006446;regulation of translational initiation;3.5534272546938e-09!GO:0003743;translation initiation factor activity;4.82571580917281e-09!GO:0044248;cellular catabolic process;5.57921602982796e-09!GO:0050789;regulation of biological process;6.31714163807511e-09!GO:0031965;nuclear membrane;7.39729580590875e-09!GO:0003712;transcription cofactor activity;7.39729580590875e-09!GO:0043285;biopolymer catabolic process;7.52553285261577e-09!GO:0005856;cytoskeleton;8.25119411614803e-09!GO:0006091;generation of precursor metabolites and energy;9.30272616702667e-09!GO:0017038;protein import;9.73798835973768e-09!GO:0030163;protein catabolic process;1.03606828071892e-08!GO:0006099;tricarboxylic acid cycle;1.81444572838739e-08!GO:0046356;acetyl-CoA catabolic process;1.81444572838739e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.98017089620634e-08!GO:0006084;acetyl-CoA metabolic process;2.39616874756572e-08!GO:0016310;phosphorylation;2.74261889378528e-08!GO:0006366;transcription from RNA polymerase II promoter;3.2784522023101e-08!GO:0009057;macromolecule catabolic process;3.77569457036323e-08!GO:0003012;muscle system process;4.62513744015327e-08!GO:0006936;muscle contraction;4.62513744015327e-08!GO:0008639;small protein conjugating enzyme activity;5.19358494531315e-08!GO:0009109;coenzyme catabolic process;5.9808134482679e-08!GO:0044432;endoplasmic reticulum part;7.33426886120343e-08!GO:0019829;cation-transporting ATPase activity;8.22041680985744e-08!GO:0005793;ER-Golgi intermediate compartment;9.13834168122017e-08!GO:0004842;ubiquitin-protein ligase activity;9.46597838906534e-08!GO:0005788;endoplasmic reticulum lumen;9.81043514548894e-08!GO:0012501;programmed cell death;9.87918623542052e-08!GO:0050794;regulation of cellular process;1.13273458094123e-07!GO:0031252;leading edge;1.13433686793546e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.353178399908e-07!GO:0000375;RNA splicing, via transesterification reactions;1.353178399908e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.353178399908e-07!GO:0007010;cytoskeleton organization and biogenesis;1.353178399908e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.60258430091575e-07!GO:0006915;apoptosis;1.76697616102331e-07!GO:0019787;small conjugating protein ligase activity;2.30525723741016e-07!GO:0030554;adenyl nucleotide binding;2.66469649718836e-07!GO:0051187;cofactor catabolic process;2.94285941745624e-07!GO:0008219;cell death;3.02193982408944e-07!GO:0016265;death;3.02193982408944e-07!GO:0032559;adenyl ribonucleotide binding;3.12466197632195e-07!GO:0005524;ATP binding;3.170712216447e-07!GO:0016564;transcription repressor activity;3.53119560061717e-07!GO:0003676;nucleic acid binding;3.53119560061717e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.6128302919261e-07!GO:0006606;protein import into nucleus;5.50724543182113e-07!GO:0016604;nuclear body;5.51668615507669e-07!GO:0006163;purine nucleotide metabolic process;6.13522988148481e-07!GO:0045259;proton-transporting ATP synthase complex;6.84699995884623e-07!GO:0006941;striated muscle contraction;7.83856870799288e-07!GO:0016529;sarcoplasmic reticulum;8.26325604446755e-07!GO:0016528;sarcoplasm;8.26325604446755e-07!GO:0051170;nuclear import;9.61583600507442e-07!GO:0006259;DNA metabolic process;9.72748931985123e-07!GO:0051246;regulation of protein metabolic process;1.03532204316549e-06!GO:0030120;vesicle coat;1.16100201797751e-06!GO:0030662;coated vesicle membrane;1.16100201797751e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.41470156301155e-06!GO:0015986;ATP synthesis coupled proton transport;1.71540392761789e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.71540392761789e-06!GO:0005730;nucleolus;1.78945703503344e-06!GO:0016607;nuclear speck;1.97954748710696e-06!GO:0009150;purine ribonucleotide metabolic process;2.15565809025641e-06!GO:0065007;biological regulation;2.57620191371148e-06!GO:0016044;membrane organization and biogenesis;2.5821850639545e-06!GO:0031982;vesicle;2.815585263439e-06!GO:0031988;membrane-bound vesicle;3.18377226969836e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.37974460252674e-06!GO:0007264;small GTPase mediated signal transduction;3.81876854987688e-06!GO:0016070;RNA metabolic process;3.8943944743062e-06!GO:0014706;striated muscle development;4.27855402978973e-06!GO:0045786;negative regulation of progression through cell cycle;4.36780099056449e-06!GO:0046034;ATP metabolic process;4.40038296760157e-06!GO:0031410;cytoplasmic vesicle;4.40038296760157e-06!GO:0016023;cytoplasmic membrane-bound vesicle;4.74469625272078e-06!GO:0005768;endosome;4.77879050759803e-06!GO:0044420;extracellular matrix part;5.28549768242098e-06!GO:0051188;cofactor biosynthetic process;5.71255502307458e-06!GO:0031674;I band;5.81802662497761e-06!GO:0009259;ribonucleotide metabolic process;6.55427832543416e-06!GO:0019899;enzyme binding;7.26669590512414e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.73883668336134e-06!GO:0044453;nuclear membrane part;7.7889868463575e-06!GO:0006888;ER to Golgi vesicle-mediated transport;7.97716068074948e-06!GO:0006164;purine nucleotide biosynthetic process;8.37484405355975e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.53145692918565e-06!GO:0009144;purine nucleoside triphosphate metabolic process;8.53145692918565e-06!GO:0003714;transcription corepressor activity;8.90293772352012e-06!GO:0016881;acid-amino acid ligase activity;1.10516162821576e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.13050579573081e-05!GO:0048475;coated membrane;1.13985474573315e-05!GO:0030117;membrane coat;1.13985474573315e-05!GO:0009141;nucleoside triphosphate metabolic process;1.51224241628176e-05!GO:0016887;ATPase activity;1.64452627251883e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.6469098167485e-05!GO:0005798;Golgi-associated vesicle;1.67779805133772e-05!GO:0007265;Ras protein signal transduction;1.78067666853588e-05!GO:0009152;purine ribonucleotide biosynthetic process;3.02757451923171e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.08415943313864e-05!GO:0005762;mitochondrial large ribosomal subunit;3.2550958904729e-05!GO:0000315;organellar large ribosomal subunit;3.2550958904729e-05!GO:0003924;GTPase activity;3.40480614427706e-05!GO:0005865;striated muscle thin filament;3.48633997963916e-05!GO:0006897;endocytosis;3.66926487344668e-05!GO:0010324;membrane invagination;3.66926487344668e-05!GO:0051128;regulation of cellular component organization and biogenesis;3.69080708807177e-05!GO:0006754;ATP biosynthetic process;3.69080708807177e-05!GO:0006753;nucleoside phosphate metabolic process;3.69080708807177e-05!GO:0006916;anti-apoptosis;3.80786669121326e-05!GO:0007519;skeletal muscle development;4.37908377121167e-05!GO:0043069;negative regulation of programmed cell death;4.54576367752108e-05!GO:0005523;tropomyosin binding;4.6842281503033e-05!GO:0009056;catabolic process;4.83249000649274e-05!GO:0009966;regulation of signal transduction;5.41751342495837e-05!GO:0051789;response to protein stimulus;5.43875238612498e-05!GO:0006986;response to unfolded protein;5.43875238612498e-05!GO:0043066;negative regulation of apoptosis;5.51209675989691e-05!GO:0000314;organellar small ribosomal subunit;5.73099994794784e-05!GO:0005763;mitochondrial small ribosomal subunit;5.73099994794784e-05!GO:0008361;regulation of cell size;6.52524610463862e-05!GO:0016049;cell growth;7.62118451893382e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.6550898127573e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.6550898127573e-05!GO:0065002;intracellular protein transport across a membrane;7.74045414143718e-05!GO:0042623;ATPase activity, coupled;7.75048972289057e-05!GO:0005859;muscle myosin complex;7.91550105487068e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;8.34624607224525e-05!GO:0005643;nuclear pore;9.067334188851e-05!GO:0009142;nucleoside triphosphate biosynthetic process;0.000101040548732751!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000101040548732751!GO:0031324;negative regulation of cellular metabolic process;0.000112135266184985!GO:0005581;collagen;0.000112135266184985!GO:0000151;ubiquitin ligase complex;0.000112135266184985!GO:0051427;hormone receptor binding;0.000112619994031972!GO:0031589;cell-substrate adhesion;0.000113595515555067!GO:0009260;ribonucleotide biosynthetic process;0.000116470641506832!GO:0007049;cell cycle;0.000124783336376684!GO:0030532;small nuclear ribonucleoprotein complex;0.000138034948211427!GO:0042802;identical protein binding;0.000138497135611746!GO:0005525;GTP binding;0.000155534727192922!GO:0005583;fibrillar collagen;0.000160838470144381!GO:0032446;protein modification by small protein conjugation;0.000161700540677302!GO:0001726;ruffle;0.000162370948377628!GO:0007266;Rho protein signal transduction;0.000165647993750364!GO:0016460;myosin II complex;0.000167204848852928!GO:0009117;nucleotide metabolic process;0.000167204848852928!GO:0005083;small GTPase regulator activity;0.00016799756929126!GO:0009892;negative regulation of metabolic process;0.000176327706401823!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000178960113137519!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000179608249753167!GO:0004812;aminoacyl-tRNA ligase activity;0.000179608249753167!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000179608249753167!GO:0044431;Golgi apparatus part;0.000188619583150829!GO:0030695;GTPase regulator activity;0.000192247318641901!GO:0006323;DNA packaging;0.00019683557742597!GO:0016481;negative regulation of transcription;0.000202104117925122!GO:0035257;nuclear hormone receptor binding;0.000206910821716493!GO:0030018;Z disc;0.000213748807414093!GO:0043284;biopolymer biosynthetic process;0.000215529331694802!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000215529331694802!GO:0030027;lamellipodium;0.000219033445518779!GO:0042981;regulation of apoptosis;0.000220081952991867!GO:0051726;regulation of cell cycle;0.000223588436501033!GO:0016491;oxidoreductase activity;0.000235129171016066!GO:0000074;regulation of progression through cell cycle;0.000245928525991789!GO:0005839;proteasome core complex (sensu Eukaryota);0.000246562816901431!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000246562816901431!GO:0015002;heme-copper terminal oxidase activity;0.000246562816901431!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000246562816901431!GO:0004129;cytochrome-c oxidase activity;0.000246562816901431!GO:0007160;cell-matrix adhesion;0.000253943267290078!GO:0016567;protein ubiquitination;0.000259414113497375!GO:0006613;cotranslational protein targeting to membrane;0.0002772876859188!GO:0005741;mitochondrial outer membrane;0.0002772876859188!GO:0019867;outer membrane;0.000285313612867259!GO:0043067;regulation of programmed cell death;0.000290933544718658!GO:0003746;translation elongation factor activity;0.000294417410513727!GO:0000245;spliceosome assembly;0.000303887654161361!GO:0043623;cellular protein complex assembly;0.000321651752990033!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000336408286011076!GO:0003713;transcription coactivator activity;0.000341533700669374!GO:0031968;organelle outer membrane;0.000342915758824162!GO:0005791;rough endoplasmic reticulum;0.00037402347733834!GO:0043038;amino acid activation;0.000376459697725472!GO:0006418;tRNA aminoacylation for protein translation;0.000376459697725472!GO:0043039;tRNA aminoacylation;0.000376459697725472!GO:0050657;nucleic acid transport;0.000389120507175394!GO:0051236;establishment of RNA localization;0.000389120507175394!GO:0050658;RNA transport;0.000389120507175394!GO:0001558;regulation of cell growth;0.000395262963666057!GO:0005770;late endosome;0.000395400995103338!GO:0009108;coenzyme biosynthetic process;0.000406130607903196!GO:0006403;RNA localization;0.000414921618252257!GO:0048471;perinuclear region of cytoplasm;0.000425205430351084!GO:0019843;rRNA binding;0.000528668762925421!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000533210755347671!GO:0005789;endoplasmic reticulum membrane;0.000558570623645998!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000564357574870501!GO:0007005;mitochondrion organization and biogenesis;0.000564357574870501!GO:0005773;vacuole;0.000579660113098499!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000582590468692896!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000582590468692896!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000582590468692896!GO:0032561;guanyl ribonucleotide binding;0.000629610968756917!GO:0019001;guanyl nucleotide binding;0.000629610968756917!GO:0005905;coated pit;0.000653463579922447!GO:0030133;transport vesicle;0.000663641386863105!GO:0006414;translational elongation;0.000668263226711446!GO:0046930;pore complex;0.000676842511818115!GO:0016563;transcription activator activity;0.000687050206337052!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000722187344522669!GO:0016197;endosome transport;0.000725308529826339!GO:0005912;adherens junction;0.000727890959528252!GO:0033673;negative regulation of kinase activity;0.000770302692899551!GO:0006469;negative regulation of protein kinase activity;0.000770302692899551!GO:0004298;threonine endopeptidase activity;0.000800108471415299!GO:0043566;structure-specific DNA binding;0.000851287071178185!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00089658604046271!GO:0030867;rough endoplasmic reticulum membrane;0.000896837376130788!GO:0016568;chromatin modification;0.000946608296918291!GO:0005667;transcription factor complex;0.000946608296918291!GO:0051287;NAD binding;0.000958655488950748!GO:0044262;cellular carbohydrate metabolic process;0.00100171681916495!GO:0003697;single-stranded DNA binding;0.00106032697975441!GO:0051540;metal cluster binding;0.00106899344667075!GO:0051536;iron-sulfur cluster binding;0.00106899344667075!GO:0035258;steroid hormone receptor binding;0.00107464301378005!GO:0000323;lytic vacuole;0.00108253906748982!GO:0005764;lysosome;0.00108253906748982!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00111885721356803!GO:0005769;early endosome;0.00114930784674156!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00127804652853263!GO:0051920;peroxiredoxin activity;0.00144726913850919!GO:0007243;protein kinase cascade;0.00149179397385048!GO:0022890;inorganic cation transmembrane transporter activity;0.00165727892031577!GO:0044440;endosomal part;0.00176559220571566!GO:0010008;endosome membrane;0.00176559220571566!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00181760943547547!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00181760943547547!GO:0006635;fatty acid beta-oxidation;0.00187773042817711!GO:0001725;stress fiber;0.00192201035189907!GO:0032432;actin filament bundle;0.00192201035189907!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00199564755934559!GO:0006752;group transfer coenzyme metabolic process;0.00201233510758642!GO:0051348;negative regulation of transferase activity;0.00213553674221853!GO:0016853;isomerase activity;0.00221621714963432!GO:0006950;response to stress;0.00222516951568076!GO:0016791;phosphoric monoester hydrolase activity;0.00232104059363837!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00249837586917998!GO:0051276;chromosome organization and biogenesis;0.0025498377217637!GO:0006402;mRNA catabolic process;0.00257667430637147!GO:0016859;cis-trans isomerase activity;0.00257667430637147!GO:0048522;positive regulation of cellular process;0.0026125283216832!GO:0005977;glycogen metabolic process;0.00263300420429454!GO:0051087;chaperone binding;0.00271439760473737!GO:0008286;insulin receptor signaling pathway;0.00277769993880191!GO:0008250;oligosaccharyl transferase complex;0.00277769993880191!GO:0006937;regulation of muscle contraction;0.00277769993880191!GO:0005813;centrosome;0.00283692305932902!GO:0030663;COPI coated vesicle membrane;0.00291746019973997!GO:0030126;COPI vesicle coat;0.00291746019973997!GO:0031032;actomyosin structure organization and biogenesis;0.00302175303974633!GO:0008047;enzyme activator activity;0.00307425677323228!GO:0051028;mRNA transport;0.00321305670708733!GO:0030132;clathrin coat of coated pit;0.0032556716622684!GO:0005100;Rho GTPase activator activity;0.0032639075676901!GO:0051539;4 iron, 4 sulfur cluster binding;0.0033133918514558!GO:0019904;protein domain specific binding;0.00338430608249126!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00342267207557427!GO:0015399;primary active transmembrane transporter activity;0.00342267207557427!GO:0005048;signal sequence binding;0.00343434171859725!GO:0043488;regulation of mRNA stability;0.00347907632676314!GO:0043487;regulation of RNA stability;0.00347907632676314!GO:0043021;ribonucleoprotein binding;0.00349529444120093!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00379244059947222!GO:0040008;regulation of growth;0.00379244059947222!GO:0006942;regulation of striated muscle contraction;0.00380205529433896!GO:0008154;actin polymerization and/or depolymerization;0.003840892687167!GO:0046314;phosphocreatine biosynthetic process;0.00385802105401635!GO:0006603;phosphocreatine metabolic process;0.00385802105401635!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00391442727310354!GO:0045892;negative regulation of transcription, DNA-dependent;0.00402193549123532!GO:0033017;sarcoplasmic reticulum membrane;0.0040822256754011!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00417699377166229!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00442369735674357!GO:0006818;hydrogen transport;0.00449006020607165!GO:0007242;intracellular signaling cascade;0.00463162033231774!GO:0030031;cell projection biogenesis;0.00473716040963388!GO:0004386;helicase activity;0.00484306290420474!GO:0015992;proton transport;0.00485203188331863!GO:0004576;oligosaccharyl transferase activity;0.00490945855812663!GO:0045893;positive regulation of transcription, DNA-dependent;0.00517994818687185!GO:0015631;tubulin binding;0.0052192453007127!GO:0005924;cell-substrate adherens junction;0.00556666336886359!GO:0006979;response to oxidative stress;0.00559166124748646!GO:0045941;positive regulation of transcription;0.00563746640037151!GO:0030055;cell-matrix junction;0.00563746640037151!GO:0048518;positive regulation of biological process;0.00580103559197139!GO:0005885;Arp2/3 protein complex;0.00588733494941301!GO:0022402;cell cycle process;0.00599826640783816!GO:0005096;GTPase activator activity;0.00616990504417156!GO:0005790;smooth endoplasmic reticulum;0.00619468121899858!GO:0065004;protein-DNA complex assembly;0.00622539662198867!GO:0006974;response to DNA damage stimulus;0.00627444000851203!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00655906415230769!GO:0008139;nuclear localization sequence binding;0.00655997966659011!GO:0008287;protein serine/threonine phosphatase complex;0.00665589374670375!GO:0007167;enzyme linked receptor protein signaling pathway;0.00666711931855138!GO:0016311;dephosphorylation;0.00688118344120439!GO:0006073;glucan metabolic process;0.0069396138656042!GO:0004721;phosphoprotein phosphatase activity;0.00696637189085079!GO:0030518;steroid hormone receptor signaling pathway;0.00701930619323865!GO:0030137;COPI-coated vesicle;0.00701930619323865!GO:0030041;actin filament polymerization;0.00703423237290389!GO:0009719;response to endogenous stimulus;0.00707479596671805!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00708623375513544!GO:0033043;regulation of organelle organization and biogenesis;0.00708623375513544!GO:0045445;myoblast differentiation;0.0072746404959947!GO:0006892;post-Golgi vesicle-mediated transport;0.0072746404959947!GO:0048741;skeletal muscle fiber development;0.00742614807463452!GO:0048747;muscle fiber development;0.00742614807463452!GO:0051252;regulation of RNA metabolic process;0.00742614807463452!GO:0030658;transport vesicle membrane;0.00751255715995214!GO:0043681;protein import into mitochondrion;0.00751255715995214!GO:0033116;ER-Golgi intermediate compartment membrane;0.0078005410459904!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00798886985235653!GO:0030134;ER to Golgi transport vesicle;0.00819628193230804!GO:0006612;protein targeting to membrane;0.00866177509378079!GO:0000139;Golgi membrane;0.00900454917952577!GO:0006891;intra-Golgi vesicle-mediated transport;0.00922976260813351!GO:0042254;ribosome biogenesis and assembly;0.00938951615907933!GO:0003724;RNA helicase activity;0.00939719263885354!GO:0001944;vasculature development;0.00946754881011629!GO:0030118;clathrin coat;0.00950761811577371!GO:0001666;response to hypoxia;0.00956673929799885!GO:0005815;microtubule organizing center;0.00964475577577745!GO:0042805;actinin binding;0.00986339016782933!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.00991008526801694!GO:0015630;microtubule cytoskeleton;0.00999072012960166!GO:0005862;muscle thin filament tropomyosin;0.0100474169243729!GO:0006333;chromatin assembly or disassembly;0.0100514053151013!GO:0019395;fatty acid oxidation;0.0100556833403921!GO:0008026;ATP-dependent helicase activity;0.010236191428143!GO:0007050;cell cycle arrest;0.0104739691747505!GO:0031072;heat shock protein binding;0.0109218466782629!GO:0016459;myosin complex;0.0111714667327415!GO:0017166;vinculin binding;0.0112501664290606!GO:0048041;focal adhesion formation;0.0119513297801678!GO:0006607;NLS-bearing substrate import into nucleus;0.0119678165014375!GO:0043492;ATPase activity, coupled to movement of substances;0.0123392222920553!GO:0003729;mRNA binding;0.0124171807556924!GO:0005518;collagen binding;0.0132003414421823!GO:0004674;protein serine/threonine kinase activity;0.0133518302262713!GO:0008654;phospholipid biosynthetic process;0.013990090742711!GO:0033018;sarcoplasmic reticulum lumen;0.0142276175600318!GO:0005586;collagen type III;0.0144108433488258!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0145040979269665!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0145286958128197!GO:0030127;COPII vesicle coat;0.0145286958128197!GO:0012507;ER to Golgi transport vesicle membrane;0.0145286958128197!GO:0045947;negative regulation of translational initiation;0.0146625332551548!GO:0048500;signal recognition particle;0.0148356360904936!GO:0048468;cell development;0.0154553963632268!GO:0006779;porphyrin biosynthetic process;0.0155779114581042!GO:0033014;tetrapyrrole biosynthetic process;0.0155779114581042!GO:0001516;prostaglandin biosynthetic process;0.0157441083261399!GO:0046457;prostanoid biosynthetic process;0.0157441083261399!GO:0001527;microfibril;0.0157441083261399!GO:0003702;RNA polymerase II transcription factor activity;0.0159820318295384!GO:0051270;regulation of cell motility;0.0162926456458104!GO:0001568;blood vessel development;0.0162926456458104!GO:0005516;calmodulin binding;0.0163762928079943!GO:0005604;basement membrane;0.0167938405551965!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0167938405551965!GO:0032981;mitochondrial respiratory chain complex I assembly;0.017051787300606!GO:0010257;NADH dehydrogenase complex assembly;0.017051787300606!GO:0033108;mitochondrial respiratory chain complex assembly;0.017051787300606!GO:0005913;cell-cell adherens junction;0.0171997237465561!GO:0017022;myosin binding;0.0172278478732683!GO:0030521;androgen receptor signaling pathway;0.0174415397721391!GO:0005869;dynactin complex;0.0177085752483786!GO:0050811;GABA receptor binding;0.0178703751619743!GO:0042692;muscle cell differentiation;0.0181130010170191!GO:0015036;disulfide oxidoreductase activity;0.0181130010170191!GO:0006118;electron transport;0.0182921763945641!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0182921763945641!GO:0009165;nucleotide biosynthetic process;0.0184068287002767!GO:0048487;beta-tubulin binding;0.0185197007185575!GO:0000902;cell morphogenesis;0.0185911472579366!GO:0032989;cellular structure morphogenesis;0.0185911472579366!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0186424516768478!GO:0018196;peptidyl-asparagine modification;0.019049418286751!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.019049418286751!GO:0031625;ubiquitin protein ligase binding;0.0195867223228351!GO:0009081;branched chain family amino acid metabolic process;0.0197005804220052!GO:0000059;protein import into nucleus, docking;0.0197005804220052!GO:0006470;protein amino acid dephosphorylation;0.0197005804220052!GO:0035023;regulation of Rho protein signal transduction;0.0197005804220052!GO:0045454;cell redox homeostasis;0.0198694604339664!GO:0055001;muscle cell development;0.0199732129939078!GO:0030239;myofibril assembly;0.0199732129939078!GO:0055002;striated muscle cell development;0.0199732129939078!GO:0005605;basal lamina;0.0204460741614476!GO:0016740;transferase activity;0.0211447632878246!GO:0030522;intracellular receptor-mediated signaling pathway;0.0215927444069157!GO:0030660;Golgi-associated vesicle membrane;0.0215927444069157!GO:0005861;troponin complex;0.0222940049422414!GO:0004722;protein serine/threonine phosphatase activity;0.0225404636322686!GO:0007006;mitochondrial membrane organization and biogenesis;0.0225664932829067!GO:0030100;regulation of endocytosis;0.022684401667794!GO:0046983;protein dimerization activity;0.0227890231494465!GO:0003690;double-stranded DNA binding;0.0232873767596682!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0233563724632343!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0233811072002205!GO:0006778;porphyrin metabolic process;0.0238932575218722!GO:0033013;tetrapyrrole metabolic process;0.0238932575218722!GO:0051168;nuclear export;0.0242287799347775!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0242799016759553!GO:0019902;phosphatase binding;0.0242954697252471!GO:0005578;proteinaceous extracellular matrix;0.0243073641780865!GO:0031143;pseudopodium;0.0250172667588716!GO:0051056;regulation of small GTPase mediated signal transduction;0.0251609978784207!GO:0046578;regulation of Ras protein signal transduction;0.0255329798405809!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.026085451380257!GO:0006112;energy reserve metabolic process;0.027247218536094!GO:0008147;structural constituent of bone;0.0278506030557322!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0285454209824919!GO:0045047;protein targeting to ER;0.0285454209824919!GO:0045098;type III intermediate filament;0.0290331324804221!GO:0016011;dystroglycan complex;0.0290922409973723!GO:0035035;histone acetyltransferase binding;0.029312080075561!GO:0051101;regulation of DNA binding;0.0295849707028043!GO:0030832;regulation of actin filament length;0.0301078984241808!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.030394796185494!GO:0016301;kinase activity;0.0309042651803884!GO:0050681;androgen receptor binding;0.031343727995327!GO:0019752;carboxylic acid metabolic process;0.0318099625737996!GO:0031901;early endosome membrane;0.0321424304746662!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.032177142281677!GO:0003711;transcription elongation regulator activity;0.0324223682473199!GO:0048659;smooth muscle cell proliferation;0.0324401609139784!GO:0043034;costamere;0.0326336878259159!GO:0004111;creatine kinase activity;0.0328459806354664!GO:0006082;organic acid metabolic process;0.0333388621705797!GO:0050662;coenzyme binding;0.033540634940402!GO:0030140;trans-Golgi network transport vesicle;0.0336033099895317!GO:0016405;CoA-ligase activity;0.033634455892651!GO:0051098;regulation of binding;0.0338969780395895!GO:0006399;tRNA metabolic process;0.0340946324052818!GO:0006839;mitochondrial transport;0.034383865731934!GO:0032535;regulation of cellular component size;0.0348543811763943!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0353628046682098!GO:0005925;focal adhesion;0.0356746697161181!GO:0040012;regulation of locomotion;0.0356746697161181!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0358139782389475!GO:0006595;polyamine metabolic process;0.0363391520904131!GO:0031970;organelle envelope lumen;0.0365233166652984!GO:0040011;locomotion;0.0365233166652984!GO:0051393;alpha-actinin binding;0.0370933447325573!GO:0016584;nucleosome positioning;0.038305095857017!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0386082174947595!GO:0051370;ZASP binding;0.0393023000422521!GO:0051374;FATZ 1 binding;0.0393023000422521!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0396683171651751!GO:0004448;isocitrate dehydrogenase activity;0.039863305144541!GO:0043407;negative regulation of MAP kinase activity;0.0401200658931811!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0401200658931811!GO:0006650;glycerophospholipid metabolic process;0.0402494730978648!GO:0051049;regulation of transport;0.0403759148385715!GO:0000785;chromatin;0.0418299290168256!GO:0030125;clathrin vesicle coat;0.0427050586711217!GO:0030665;clathrin coated vesicle membrane;0.0427050586711217!GO:0042396;phosphagen biosynthetic process;0.0430140221495513!GO:0006599;phosphagen metabolic process;0.0430140221495513!GO:0019208;phosphatase regulator activity;0.0440768141613922!GO:0005637;nuclear inner membrane;0.0465618428198002!GO:0019222;regulation of metabolic process;0.0467493962623767!GO:0005938;cell cortex;0.0475379668086852!GO:0048660;regulation of smooth muscle cell proliferation;0.0475735181825571!GO:0004300;enoyl-CoA hydratase activity;0.0482933079611896!GO:0008017;microtubule binding;0.048758073829538!GO:0006334;nucleosome assembly;0.0488616746453962!GO:0008312;7S RNA binding;0.0489616876351221!GO:0000060;protein import into nucleus, translocation;0.0490196537820617!GO:0000159;protein phosphatase type 2A complex;0.0492036706826475!GO:0030911;TPR domain binding;0.0492399106151427 | |||
|sample_id=10069 | |sample_id=10069 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=diaphragm | |sample_tissue=diaphragm | ||
|top_motifs=MEF2{A,B,C,D}:6.20431999248;NR1H4:4.51449731561;FOXL1:3.73293352504;TAL1_TCF{3,4,12}:3.68545634184;IKZF2:3.57578959382;SOX5:3.40472679666;NR5A1,2:3.36043991811;ESR1:3.28954075946;NR6A1:3.27502461839;HOX{A4,D4}:3.0038738266;SMAD1..7,9:2.89565982482;SPZ1:2.83125764952;SRF:2.60227227693;ZNF384:2.58342389552;NFE2L1:2.53320788184;GCM1,2:2.49356183782;MYBL2:2.45474000104;GLI1..3:2.30996233198;MAFB:2.20421851982;NKX2-2,8:2.18365651657;TBP:2.15176692038;FOXP3:2.12671194158;AR:2.03332867695;PDX1:1.93397193215;TFAP2{A,C}:1.88548263071;TFAP4:1.86544450228;TLX2:1.85495390667;PAX5:1.83061187502;ALX1:1.72175896499;TOPORS:1.71619505732;GATA4:1.71291875308;ATF2:1.67506916237;TGIF1:1.61480945446;RORA:1.612022436;HIC1:1.60193468607;PATZ1:1.59883984216;ESRRA:1.57982678519;MAZ:1.55955335729;NANOG{mouse}:1.54397455041;FOXM1:1.52181672296;NKX3-1:1.51568675368;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.49903024276;UFEwm:1.48965890529;IKZF1:1.48295555108;NFATC1..3:1.46927876976;POU1F1:1.43303064483;RXR{A,B,G}:1.42914958675;HOX{A6,A7,B6,B7}:1.4250568207;HMGA1,2:1.41642815434;EVI1:1.40747776993;KLF4:1.40342566236;NHLH1,2:1.38167217708;FOXP1:1.35204661901;XBP1:1.30618499179;NFIX:1.28124385792;EGR1..3:1.18817908945;RREB1:1.17590295285;ZBTB16:1.17423168966;ZNF423:1.1658551324;MYOD1:1.16430090355;HES1:1.16248508762;MTE{core}:1.15802918104;NKX2-1,4:1.15749469192;GFI1B:1.10134732319;TFAP2B:1.10086959285;GTF2A1,2:1.08595055854;HSF1,2:1.05637604662;MED-1{core}:1.05290719867;MZF1:1.04283607204;POU3F1..4:1.04204330644;LHX3,4:1.02705586706;TLX1..3_NFIC{dimer}:1.0207301289;TEAD1:0.973131910637;YY1:0.967447832494;EP300:0.927942906838;ZIC1..3:0.907616723624;BPTF:0.907354785303;NKX6-1,2:0.877974856517;TFCP2:0.876821706571;FOXQ1:0.87335830542;TBX4,5:0.860212054943;HAND1,2:0.819688010447;MTF1:0.817665486516;GTF2I:0.815506072422;RBPJ:0.796801770853;PRDM1:0.749824793886;FOXO1,3,4:0.728837091473;RXRA_VDR{dimer}:0.703899725214;STAT5{A,B}:0.678494682844;PBX1:0.677316604147;SP1:0.648610456663;SOX{8,9,10}:0.640235376914;LMO2:0.622240295135;PAX6:0.607282711053;CDX1,2,4:0.580624076013;HOX{A5,B5}:0.569983706359;PAX3,7:0.565452145056;POU6F1:0.553686777636;MYFfamily:0.551347414392;ATF6:0.53440004617;ZFP161:0.517264362773;PAX1,9:0.469765492902;NR3C1:0.453729583755;ZNF148:0.444501103383;LEF1_TCF7_TCF7L1,2:0.439474074823;IRF7:0.424403829155;ZNF238:0.402127026901;ARID5B:0.39753697501;AIRE:0.392803689357;BREu{core}:0.389721454564;NKX2-3_NKX2-5:0.365852738835;NKX3-2:0.343408642408;HOXA9_MEIS1:0.334170171693;STAT2,4,6:0.31563026156;CUX2:0.27752746599;HMX1:0.273068000674;SOX17:0.235950636003;REST:0.2194778563;JUN:0.2104578428;CREB1:0.187422388472;GZF1:0.104216687388;FOXA2:0.0988130909681;FOX{F1,F2,J1}:-0.0119007800841;ALX4:-0.0422194978551;SOX2:-0.0510147820771;POU5F1:-0.063793675955;EN1,2:-0.0897422998529;GFI1:-0.129024513457;SNAI1..3:-0.140887629501;ETS1,2:-0.146350108879;FOX{D1,D2}:-0.147474536538;PITX1..3:-0.154374706267;PAX2:-0.160425435884;SPI1:-0.188352477462;ATF4:-0.190036374567;DMAP1_NCOR{1,2}_SMARC:-0.194082904248;GATA6:-0.214169388144;STAT1,3:-0.219895146193;TP53:-0.240946614476;ONECUT1,2:-0.248728628151;SREBF1,2:-0.248814562864;IRF1,2:-0.259654715474;T:-0.259750284534;XCPE1{core}:-0.264837328814;ZNF143:-0.2895633842;HNF4A_NR2F1,2:-0.296396348241;RFX2..5_RFXANK_RFXAP:-0.353372309214;ZBTB6:-0.364514735941;NANOG:-0.419226901886;FOX{I1,J2}:-0.432144483933;SPIB:-0.467286790361;HBP1_HMGB_SSRP1_UBTF:-0.503472794372;FOSL2:-0.50501981333;PPARG:-0.544275571944;HNF1A:-0.574685988342;HLF:-0.599841325009;NFKB1_REL_RELA:-0.60102243285;DBP:-0.606951397759;PAX4:-0.621181433029;E2F1..5:-0.683137940518;NRF1:-0.686696593479;CDC5L:-0.691525625351;ELF1,2,4:-0.755284726655;FOXN1:-0.7556840131;CEBPA,B_DDIT3:-0.76031910521;ZEB1:-0.764563072054;AHR_ARNT_ARNT2:-0.828000128646;ATF5_CREB3:-0.839420466236;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.843566440145;RFX1:-0.854314711121;FOS_FOS{B,L1}_JUN{B,D}:-0.884356399199;VSX1,2:-0.899966956696;NFE2:-0.926768560501;TEF:-0.932308713956;RUNX1..3:-0.951791959845;NFIL3:-0.989996626028;NFY{A,B,C}:-1.01758415021;FOXD3:-1.01971823109;BACH2:-1.02532736365;NFE2L2:-1.05560419757;EBF1:-1.09760588894;ADNP_IRX_SIX_ZHX:-1.23844507176;PAX8:-1.24413558269;CRX:-1.34410130667;OCT4_SOX2{dimer}:-1.40533768076;bHLH_family:-1.4196924695;PRRX1,2:-1.45863059703;HIF1A:-1.47581487769;TFDP1:-1.47865591231;POU2F1..3:-1.87648666219;MYB:-1.90566371241;ELK1,4_GABP{A,B1}:-2.11824610611 | |top_motifs=MEF2{A,B,C,D}:6.20431999248;NR1H4:4.51449731561;FOXL1:3.73293352504;TAL1_TCF{3,4,12}:3.68545634184;IKZF2:3.57578959382;SOX5:3.40472679666;NR5A1,2:3.36043991811;ESR1:3.28954075946;NR6A1:3.27502461839;HOX{A4,D4}:3.0038738266;SMAD1..7,9:2.89565982482;SPZ1:2.83125764952;SRF:2.60227227693;ZNF384:2.58342389552;NFE2L1:2.53320788184;GCM1,2:2.49356183782;MYBL2:2.45474000104;GLI1..3:2.30996233198;MAFB:2.20421851982;NKX2-2,8:2.18365651657;TBP:2.15176692038;FOXP3:2.12671194158;AR:2.03332867695;PDX1:1.93397193215;TFAP2{A,C}:1.88548263071;TFAP4:1.86544450228;TLX2:1.85495390667;PAX5:1.83061187502;ALX1:1.72175896499;TOPORS:1.71619505732;GATA4:1.71291875308;ATF2:1.67506916237;TGIF1:1.61480945446;RORA:1.612022436;HIC1:1.60193468607;PATZ1:1.59883984216;ESRRA:1.57982678519;MAZ:1.55955335729;NANOG{mouse}:1.54397455041;FOXM1:1.52181672296;NKX3-1:1.51568675368;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.49903024276;UFEwm:1.48965890529;IKZF1:1.48295555108;NFATC1..3:1.46927876976;POU1F1:1.43303064483;RXR{A,B,G}:1.42914958675;HOX{A6,A7,B6,B7}:1.4250568207;HMGA1,2:1.41642815434;EVI1:1.40747776993;KLF4:1.40342566236;NHLH1,2:1.38167217708;FOXP1:1.35204661901;XBP1:1.30618499179;NFIX:1.28124385792;EGR1..3:1.18817908945;RREB1:1.17590295285;ZBTB16:1.17423168966;ZNF423:1.1658551324;MYOD1:1.16430090355;HES1:1.16248508762;MTE{core}:1.15802918104;NKX2-1,4:1.15749469192;GFI1B:1.10134732319;TFAP2B:1.10086959285;GTF2A1,2:1.08595055854;HSF1,2:1.05637604662;MED-1{core}:1.05290719867;MZF1:1.04283607204;POU3F1..4:1.04204330644;LHX3,4:1.02705586706;TLX1..3_NFIC{dimer}:1.0207301289;TEAD1:0.973131910637;YY1:0.967447832494;EP300:0.927942906838;ZIC1..3:0.907616723624;BPTF:0.907354785303;NKX6-1,2:0.877974856517;TFCP2:0.876821706571;FOXQ1:0.87335830542;TBX4,5:0.860212054943;HAND1,2:0.819688010447;MTF1:0.817665486516;GTF2I:0.815506072422;RBPJ:0.796801770853;PRDM1:0.749824793886;FOXO1,3,4:0.728837091473;RXRA_VDR{dimer}:0.703899725214;STAT5{A,B}:0.678494682844;PBX1:0.677316604147;SP1:0.648610456663;SOX{8,9,10}:0.640235376914;LMO2:0.622240295135;PAX6:0.607282711053;CDX1,2,4:0.580624076013;HOX{A5,B5}:0.569983706359;PAX3,7:0.565452145056;POU6F1:0.553686777636;MYFfamily:0.551347414392;ATF6:0.53440004617;ZFP161:0.517264362773;PAX1,9:0.469765492902;NR3C1:0.453729583755;ZNF148:0.444501103383;LEF1_TCF7_TCF7L1,2:0.439474074823;IRF7:0.424403829155;ZNF238:0.402127026901;ARID5B:0.39753697501;AIRE:0.392803689357;BREu{core}:0.389721454564;NKX2-3_NKX2-5:0.365852738835;NKX3-2:0.343408642408;HOXA9_MEIS1:0.334170171693;STAT2,4,6:0.31563026156;CUX2:0.27752746599;HMX1:0.273068000674;SOX17:0.235950636003;REST:0.2194778563;JUN:0.2104578428;CREB1:0.187422388472;GZF1:0.104216687388;FOXA2:0.0988130909681;FOX{F1,F2,J1}:-0.0119007800841;ALX4:-0.0422194978551;SOX2:-0.0510147820771;POU5F1:-0.063793675955;EN1,2:-0.0897422998529;GFI1:-0.129024513457;SNAI1..3:-0.140887629501;ETS1,2:-0.146350108879;FOX{D1,D2}:-0.147474536538;PITX1..3:-0.154374706267;PAX2:-0.160425435884;SPI1:-0.188352477462;ATF4:-0.190036374567;DMAP1_NCOR{1,2}_SMARC:-0.194082904248;GATA6:-0.214169388144;STAT1,3:-0.219895146193;TP53:-0.240946614476;ONECUT1,2:-0.248728628151;SREBF1,2:-0.248814562864;IRF1,2:-0.259654715474;T:-0.259750284534;XCPE1{core}:-0.264837328814;ZNF143:-0.2895633842;HNF4A_NR2F1,2:-0.296396348241;RFX2..5_RFXANK_RFXAP:-0.353372309214;ZBTB6:-0.364514735941;NANOG:-0.419226901886;FOX{I1,J2}:-0.432144483933;SPIB:-0.467286790361;HBP1_HMGB_SSRP1_UBTF:-0.503472794372;FOSL2:-0.50501981333;PPARG:-0.544275571944;HNF1A:-0.574685988342;HLF:-0.599841325009;NFKB1_REL_RELA:-0.60102243285;DBP:-0.606951397759;PAX4:-0.621181433029;E2F1..5:-0.683137940518;NRF1:-0.686696593479;CDC5L:-0.691525625351;ELF1,2,4:-0.755284726655;FOXN1:-0.7556840131;CEBPA,B_DDIT3:-0.76031910521;ZEB1:-0.764563072054;AHR_ARNT_ARNT2:-0.828000128646;ATF5_CREB3:-0.839420466236;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.843566440145;RFX1:-0.854314711121;FOS_FOS{B,L1}_JUN{B,D}:-0.884356399199;VSX1,2:-0.899966956696;NFE2:-0.926768560501;TEF:-0.932308713956;RUNX1..3:-0.951791959845;NFIL3:-0.989996626028;NFY{A,B,C}:-1.01758415021;FOXD3:-1.01971823109;BACH2:-1.02532736365;NFE2L2:-1.05560419757;EBF1:-1.09760588894;ADNP_IRX_SIX_ZHX:-1.23844507176;PAX8:-1.24413558269;CRX:-1.34410130667;OCT4_SOX2{dimer}:-1.40533768076;bHLH_family:-1.4196924695;PRRX1,2:-1.45863059703;HIF1A:-1.47581487769;TFDP1:-1.47865591231;POU2F1..3:-1.87648666219;MYB:-1.90566371241;ELK1,4_GABP{A,B1}:-2.11824610611 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10069-101I6;search_select_hide=table117:FF:10069-101I6 | |||
}} | }} | ||
Latest revision as of 12:19, 3 June 2020
| Name: | diaphragm, fetal, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11779 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11779
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11779
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.667 |
| 10 | 10 | 0.2 |
| 100 | 100 | 0.845 |
| 101 | 101 | 0.276 |
| 102 | 102 | 0.491 |
| 103 | 103 | 0.48 |
| 104 | 104 | 0.735 |
| 105 | 105 | 0.808 |
| 106 | 106 | 0.667 |
| 107 | 107 | 0.0998 |
| 108 | 108 | 0.106 |
| 109 | 109 | 0.00657 |
| 11 | 11 | 0.721 |
| 110 | 110 | 0.637 |
| 111 | 111 | 0.959 |
| 112 | 112 | 0.728 |
| 113 | 113 | 0.00192 |
| 114 | 114 | 0.306 |
| 115 | 115 | 0.087 |
| 116 | 116 | 0.0621 |
| 117 | 117 | 0.0222 |
| 118 | 118 | 0.0194 |
| 119 | 119 | 0.232 |
| 12 | 12 | 0.729 |
| 120 | 120 | 0.291 |
| 121 | 121 | 0.85 |
| 122 | 122 | 0.00187 |
| 123 | 123 | 0.354 |
| 124 | 124 | 0.323 |
| 125 | 125 | 0.867 |
| 126 | 126 | 0.603 |
| 127 | 127 | 0.543 |
| 128 | 128 | 0.358 |
| 129 | 129 | 0.719 |
| 13 | 13 | 0.432 |
| 130 | 130 | 0.464 |
| 131 | 131 | 0.274 |
| 132 | 132 | 0.0224 |
| 133 | 133 | 0.0374 |
| 134 | 134 | 0.841 |
| 135 | 135 | 0.0837 |
| 136 | 136 | 0.0799 |
| 137 | 137 | 0.698 |
| 138 | 138 | 0.951 |
| 139 | 139 | 0.135 |
| 14 | 14 | 0.934 |
| 140 | 140 | 0.511 |
| 141 | 141 | 0.699 |
| 142 | 142 | 0.387 |
| 143 | 143 | 0.0501 |
| 144 | 144 | 0.504 |
| 145 | 145 | 0.946 |
| 146 | 146 | 0.587 |
| 147 | 147 | 0.0115 |
| 148 | 148 | 0.23 |
| 149 | 149 | 0.196 |
| 15 | 15 | 0.233 |
| 150 | 150 | 0.665 |
| 151 | 151 | 0.539 |
| 152 | 152 | 0.797 |
| 153 | 153 | 0.372 |
| 154 | 154 | 0.66 |
| 155 | 155 | 0.401 |
| 156 | 156 | 0.798 |
| 157 | 157 | 0.902 |
| 158 | 158 | 0.53 |
| 159 | 159 | 0.968 |
| 16 | 16 | 0.595 |
| 160 | 160 | 0.437 |
| 161 | 161 | 0.141 |
| 162 | 162 | 0.559 |
| 163 | 163 | 0.184 |
| 164 | 164 | 0.317 |
| 165 | 165 | 0.0351 |
| 166 | 166 | 0.0253 |
| 167 | 167 | 0.333 |
| 168 | 168 | 0.379 |
| 169 | 169 | 0.848 |
| 17 | 17 | 0.62 |
| 18 | 18 | 0.32 |
| 19 | 19 | 0.0261 |
| 2 | 2 | 0.0637 |
| 20 | 20 | 0.0247 |
| 21 | 21 | 0.489 |
| 22 | 22 | 0.982 |
| 23 | 23 | 0.353 |
| 24 | 24 | 0.0114 |
| 25 | 25 | 0.567 |
| 26 | 26 | 0.241 |
| 27 | 27 | 0.482 |
| 28 | 28 | 0.398 |
| 29 | 29 | 0.026 |
| 3 | 3 | 0.647 |
| 30 | 30 | 0.189 |
| 31 | 31 | 0.256 |
| 32 | 32 | 5.7549e-8 |
| 33 | 33 | 0.179 |
| 34 | 34 | 0.246 |
| 35 | 35 | 0.864 |
| 36 | 36 | 0.149 |
| 37 | 37 | 0.21 |
| 38 | 38 | 0.838 |
| 39 | 39 | 0.101 |
| 4 | 4 | 0.708 |
| 40 | 40 | 0.162 |
| 41 | 41 | 0.34 |
| 42 | 42 | 0.216 |
| 43 | 43 | 0.657 |
| 44 | 44 | 0.0799 |
| 45 | 45 | 0.463 |
| 46 | 46 | 0.762 |
| 47 | 47 | 0.207 |
| 48 | 48 | 0.204 |
| 49 | 49 | 0.953 |
| 5 | 5 | 0.696 |
| 50 | 50 | 0.826 |
| 51 | 51 | 0.912 |
| 52 | 52 | 0.222 |
| 53 | 53 | 0.644 |
| 54 | 54 | 0.854 |
| 55 | 55 | 0.255 |
| 56 | 56 | 0.345 |
| 57 | 57 | 0.866 |
| 58 | 58 | 0.623 |
| 59 | 59 | 0.79 |
| 6 | 6 | 0.629 |
| 60 | 60 | 0.223 |
| 61 | 61 | 0.33 |
| 62 | 62 | 0.965 |
| 63 | 63 | 0.547 |
| 64 | 64 | 0.424 |
| 65 | 65 | 0.689 |
| 66 | 66 | 0.00464 |
| 67 | 67 | 0.482 |
| 68 | 68 | 0.36 |
| 69 | 69 | 0.514 |
| 7 | 7 | 0.954 |
| 70 | 70 | 0.719 |
| 71 | 71 | 0.147 |
| 72 | 72 | 0.366 |
| 73 | 73 | 0.185 |
| 74 | 74 | 0.406 |
| 75 | 75 | 0.0525 |
| 76 | 76 | 0.251 |
| 77 | 77 | 0.433 |
| 78 | 78 | 0.641 |
| 79 | 79 | 0.132 |
| 8 | 8 | 0.993 |
| 80 | 80 | 0.151 |
| 81 | 81 | 0.727 |
| 82 | 82 | 0.592 |
| 83 | 83 | 0.687 |
| 84 | 84 | 0.903 |
| 85 | 85 | 0.00377 |
| 86 | 86 | 0.87 |
| 87 | 87 | 0.00286 |
| 88 | 88 | 0.928 |
| 89 | 89 | 0.36 |
| 9 | 9 | 0.767 |
| 90 | 90 | 0.699 |
| 91 | 91 | 0.0534 |
| 92 | 92 | 0.234 |
| 93 | 93 | 0.896 |
| 94 | 94 | 0.0921 |
| 95 | 95 | 0.00116 |
| 96 | 96 | 0.884 |
| 97 | 97 | 0.944 |
| 98 | 98 | 0.806 |
| 99 | 99 | 0.0609 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11779
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001134 (skeletal muscle tissue)
0002100 (trunk)
0000479 (tissue)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002426 (chest muscle)
0003831 (respiratory system muscle)
0003898 (skeletal muscle of trunk)
0004830 (respiratory system skeletal muscle)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0005090 (muscle structure)
0001630 (muscle organ)
0005177 (trunk region element)
0003830 (thoracic segment muscle)
0005175 (chest organ)
0001774 (muscle of trunk)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0001103 (diaphragm)
0001004 (respiratory system)
0002204 (musculoskeletal system)
0001443 (chest)
0000383 (musculature of body)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010069 (human diaphragm - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
