FFCP PHASE1:Hg19::chr10:5541512..5541523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51806 | |EntrezGene=51806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18180 | |HGNC=18180 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZT1,Q53H37 | |UniProt=Q9NZT1,Q53H37 | ||
|association_with_transcript=9bp_to_ENST00000380332,NM_017422,uc001iic.2_5end | |association_with_transcript=9bp_to_ENST00000380332,NM_017422,uc001iic.2_5end | ||
|cluster_id=chr10:5541512..5541523,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_2_at_CALML5_5end | |description=CAGE_peak_2_at_CALML5_5end | ||
|id=chr10:5541512..5541523,- | |id=chr10:5541512..5541523,- | ||
|ontology_enrichment_celltype=CL:0000575!2.71e-08!2;CL:0002274!5.90e-07!5;CL:0000457!5.90e-07!5;CL:0002191!5.90e-07!5;CL:0000097!5.90e-07!5;CL:0000831!5.90e-07!5;CL:0002028!5.90e-07!5 | |ontology_enrichment_celltype=CL:0000575!2.71e-08!2;CL:0002274!5.90e-07!5;CL:0000457!5.90e-07!5;CL:0002191!5.90e-07!5;CL:0000097!5.90e-07!5;CL:0000831!5.90e-07!5;CL:0002028!5.90e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;7.97e-10;1!UBERON:0006298;8.67e-10;1!UBERON:0008425;1.03e-09;1!UBERON:0000358;2.88e-09;1!UBERON:0004874;2.88e-09;1 | |||
|ontology_enrichment_disease=DOID:5093!3.62e-16!4;DOID:1612!3.62e-16!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;9.82e-33;4!DOID:1612;9.82e-33;4!DOID:3151;1.21e-09;1!DOID:3149;1.21e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.43e-33,4;DOID:1612,9.43e-33,4;DOID:3151,1.21e-09,1;DOID:3149,1.21e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003408!1.89e-13!10;UBERON:0001004!3.56e-12!72;UBERON:0001044!4.70e-11!6;UBERON:0003293!4.70e-11!6;UBERON:0003294!4.70e-11!6;UBERON:0010047!4.70e-11!6;UBERON:0000167!4.70e-11!6;UBERON:0000915!1.23e-10!52;UBERON:0000166!1.66e-10!21;UBERON:0000072!2.26e-10!46;UBERON:0001041!4.26e-10!98;UBERON:0000078!8.73e-10!18;UBERON:0000310!1.48e-09!10;UBERON:0001829!3.24e-09!2;UBERON:0004921!3.89e-09!129;UBERON:0004185!3.89e-09!129;UBERON:0001042!4.74e-09!10;UBERON:0009145!4.74e-09!10;UBERON:0000161!9.64e-09!35;UBERON:0001443!1.19e-08!11;UBERON:0000065!1.23e-08!53;UBERON:0003126!3.03e-08!7;UBERON:0001005!3.03e-08!7;UBERON:0006562!3.39e-08!11;UBERON:0000077!3.58e-08!130;UBERON:0003127!3.76e-08!2;UBERON:0001007!1.55e-07!155;UBERON:0001555!1.55e-07!155;UBERON:0007026!1.55e-07!155;UBERON:0000165!1.56e-07!28;UBERON:0000930!1.56e-07!28;UBERON:0003102!3.00e-07!95;UBERON:0005178!6.39e-07!34;UBERON:0002224!6.39e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.58e-22;6!UBERON:0003293;1.58e-22;6!UBERON:0003294;1.58e-22;6!UBERON:0010047;1.58e-22;6!UBERON:0003408;1.58e-22;6!UBERON:0000167;1.58e-22;6!UBERON:0001829;7.07e-18;2!UBERON:0000165;2.04e-13;28!UBERON:0000310;3.00e-13;10!UBERON:0001443;4.62e-12;11!UBERON:0001723;2.13e-11;3!UBERON:0001033;2.13e-11;3!UBERON:0000161;1.08e-10;19!UBERON:0000166;1.08e-10;19!UBERON:0001831;7.97e-10;1!UBERON:0001567;7.97e-10;1!UBERON:0001736;8.67e-10;1!UBERON:0001041;9.29e-10;14!UBERON:0000997;1.12e-09;1!UBERON:0005056;1.12e-09;1!UBERON:0004176;1.12e-09;1!UBERON:0007029;1.56e-09;1!UBERON:0000989;2.88e-09;1!UBERON:0008811;2.88e-09;1!UBERON:0000014;3.54e-09;4!UBERON:0002372;4.50e-09;1!UBERON:0005795;4.50e-09;1!UBERON:0001961;4.50e-09;1!UBERON:0001744;4.50e-09;1!UBERON:0001042;4.50e-09;1!UBERON:0001735;4.50e-09;1!UBERON:0000033;6.54e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.58e-22,6;UBERON:0003293,1.58e-22,6;UBERON:0003294,1.58e-22,6;UBERON:0010047,1.58e-22,6;UBERON:0000167,1.58e-22,6;UBERON:0001829,7.07e-18,2;UBERON:0000166,2.67e-17,22;UBERON:0003408,1.33e-13,10;UBERON:0000310,2.95e-13,10;UBERON:0000165,6.11e-13,29;UBERON:0000930,6.11e-13,29;UBERON:0001443,4.55e-12,11;UBERON:0001723,2.08e-11,3;UBERON:0001033,2.08e-11,3;UBERON:0010056,2.08e-11,3;UBERON:0000161,2.85e-10,36;UBERON:0001831,7.98e-10,1;UBERON:0001567,7.98e-10,1;UBERON:0008801,7.98e-10,1;UBERON:0001736,8.68e-10,1;UBERON:0006298,8.68e-10,1;UBERON:0000997,1.12e-09,1;UBERON:0005056,1.12e-09,1;UBERON:0007029,1.56e-09,1;UBERON:0001444,1.78e-09,49;UBERON:0000989,2.55e-09,1;UBERON:0008811,2.55e-09,1;UBERON:0006258,2.55e-09,1;UBERON:0005876,2.55e-09,1;UBERON:0004874,2.55e-09,1;UBERON:0001004,2.84e-09,74;UBERON:0000014,3.54e-09,4;UBERON:0002372,4.15e-09,1;UBERON:0001961,4.15e-09,1;UBERON:0001744,4.15e-09,1;UBERON:0001735,4.15e-09,1;UBERON:0000033,3.70e-08,56;UBERON:0001041,1.19e-07,87;UBERON:0001042,1.39e-07,10;UBERON:0009145,1.39e-07,10;UBERON:0000153,2.89e-07,62;UBERON:0007811,2.89e-07,62;UBERON:0006562,6.18e-07,11;UBERON:0000915,8.31e-07,52 | |||
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| ||
|short_description=p2@CALML5 | |short_description=p2@CALML5 | ||
}} | }} |
Latest revision as of 13:15, 18 September 2015
Short description: | p2@CALML5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CALML5_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 9bp_to_ENST00000380332, NM_017422, uc001iic.2_5end |
EntrezGene: | CALML5 |
HGNC: | 18180 |
UniProt: | Q9NZT1Q53H37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.43e-33 | 4 |
breast cancer | 9.43e-33 | 4 |
skin squamous cell carcinoma | 1.21e-09 | 1 |
keratoacanthoma | 1.21e-09 | 1 |