FF:10063-101H9: Difference between revisions

Revision as of 19:19, 29 June 2012

Name:	temporal lobe, fetal, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	temporal lobe
dev stage	22 weeks fetus
sex	female
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Biochain
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	A702181
catalog number	Cat:RtHFN: Brain temporal lobe
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.968
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0213
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.157
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.363
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.1
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.157
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.157
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.157
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.152
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.152
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.257
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	1.007
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0114
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.178
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.272
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.272
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-7.859471e-4
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.272
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.558
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.0961
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.904
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.902
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.363
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.157
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.363
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

No results for this sample

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11772

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	8.35727e-4
MA0003.1	MA0003.1	0.174
MA0004.1	MA0004.1	0.458
MA0006.1	MA0006.1	0.263
MA0007.1	MA0007.1	0.157
MA0009.1	MA0009.1	0.105
MA0014.1	MA0014.1	0.581
MA0017.1	MA0017.1	0.00353
MA0018.2	MA0018.2	0.142
MA0019.1	MA0019.1	0.261
MA0024.1	MA0024.1	0.19
MA0025.1	MA0025.1	0.103
MA0027.1	MA0027.1	0.383
MA0028.1	MA0028.1	0.345
MA0029.1	MA0029.1	0.153
MA0030.1	MA0030.1	0.572
MA0031.1	MA0031.1	0.0842
MA0035.2	MA0035.2	0.0457
MA0038.1	MA0038.1	0.15
MA0039.2	MA0039.2	0.127
MA0040.1	MA0040.1	0.615
MA0041.1	MA0041.1	0.476
MA0042.1	MA0042.1	0.614
MA0043.1	MA0043.1	0.781
MA0046.1	MA0046.1	0.0675
MA0047.2	MA0047.2	0.00659
MA0048.1	MA0048.1	0.638
MA0050.1	MA0050.1	2.80604e-5
MA0051.1	MA0051.1	0.00454
MA0052.1	MA0052.1	0.342
MA0055.1	MA0055.1	0.072
MA0057.1	MA0057.1	0.298
MA0058.1	MA0058.1	0.32
MA0059.1	MA0059.1	0.196
MA0060.1	MA0060.1	0.0813
MA0061.1	MA0061.1	0.0153
MA0062.2	MA0062.2	0.0421
MA0065.2	MA0065.2	2.81935e-4
MA0066.1	MA0066.1	0.0148
MA0067.1	MA0067.1	0.877
MA0068.1	MA0068.1	0.167
MA0069.1	MA0069.1	0.338
MA0070.1	MA0070.1	0.396
MA0071.1	MA0071.1	0.0604
MA0072.1	MA0072.1	0.292
MA0073.1	MA0073.1	0.181
MA0074.1	MA0074.1	0.14
MA0076.1	MA0076.1	0.587
MA0077.1	MA0077.1	0.144
MA0078.1	MA0078.1	0.654
MA0079.2	MA0079.2	0.951
MA0080.2	MA0080.2	8.1854e-11
MA0081.1	MA0081.1	0.0532
MA0083.1	MA0083.1	0.00781
MA0084.1	MA0084.1	0.978
MA0087.1	MA0087.1	0.598
MA0088.1	MA0088.1	0.155
MA0090.1	MA0090.1	0.289
MA0091.1	MA0091.1	0.388
MA0092.1	MA0092.1	0.375
MA0093.1	MA0093.1	0.457
MA0099.2	MA0099.2	3.36291e-20
MA0100.1	MA0100.1	0.955
MA0101.1	MA0101.1	0.0058
MA0102.2	MA0102.2	0.0238
MA0103.1	MA0103.1	0.235
MA0104.2	MA0104.2	0.708
MA0105.1	MA0105.1	0.00846
MA0106.1	MA0106.1	0.044
MA0107.1	MA0107.1	0.00713
MA0108.2	MA0108.2	0.574
MA0111.1	MA0111.1	0.625
MA0112.2	MA0112.2	1.77974e-4
MA0113.1	MA0113.1	0.0369
MA0114.1	MA0114.1	0.00528
MA0115.1	MA0115.1	0.318
MA0116.1	MA0116.1	0.0141
MA0117.1	MA0117.1	0.817
MA0119.1	MA0119.1	0.154
MA0122.1	MA0122.1	0.2
MA0124.1	MA0124.1	0.706
MA0125.1	MA0125.1	0.312
MA0131.1	MA0131.1	0.603
MA0135.1	MA0135.1	0.812
MA0136.1	MA0136.1	7.10682e-14
MA0137.2	MA0137.2	0.179
MA0138.2	MA0138.2	0.555
MA0139.1	MA0139.1	0.229
MA0140.1	MA0140.1	0.00253
MA0141.1	MA0141.1	0.00464
MA0142.1	MA0142.1	0.598
MA0143.1	MA0143.1	0.485
MA0144.1	MA0144.1	0.0912
MA0145.1	MA0145.1	0.105
MA0146.1	MA0146.1	0.0162
MA0147.1	MA0147.1	0.605
MA0148.1	MA0148.1	0.0445
MA0149.1	MA0149.1	0.00999
MA0150.1	MA0150.1	3.22729e-5
MA0152.1	MA0152.1	0.366
MA0153.1	MA0153.1	0.184
MA0154.1	MA0154.1	0.0252
MA0155.1	MA0155.1	0.532
MA0156.1	MA0156.1	1.21398e-7
MA0157.1	MA0157.1	0.0493
MA0159.1	MA0159.1	0.00178
MA0160.1	MA0160.1	0.00676
MA0162.1	MA0162.1	0.204
MA0163.1	MA0163.1	1.24466e-4
MA0164.1	MA0164.1	0.881
MA0258.1	MA0258.1	0.00616
MA0259.1	MA0259.1	0.985

library id: CNhs12996This sample isn't target for the analysis

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11772

Novel motif	Logo	P-value
1	1	0.0726
10	10	0.0945
100	100	0.53
101	101	0.819
102	102	0.869
103	103	0.0508
104	104	0.105
105	105	0.188
106	106	0.0383
107	107	0.129
108	108	0.999
109	109	4.6965e-4
11	11	0.025
110	110	0.163
111	111	0.318
112	112	0.254
113	113	0.283
114	114	0.0553
115	115	0.765
116	116	0.403
117	117	0.0261
118	118	0.254
119	119	0.267
12	12	0.563
120	120	0.296
121	121	0.324
122	122	0.577
123	123	0.0924
124	124	0.347
125	125	0.381
126	126	0.0222
127	127	0.216
128	128	0.17
129	129	0.403
13	13	0.0054
130	130	0.0672
131	131	0.644
132	132	0.727
133	133	0.356
134	134	0.814
135	135	0.719
136	136	0.00994
137	137	0.423
138	138	0.676
139	139	0.105
14	14	0.66
140	140	0.73
141	141	0.425
142	142	0.842
143	143	0.00585
144	144	0.754
145	145	0.305
146	146	0.48
147	147	0.956
148	148	0.0435
149	149	0.105
15	15	0.0668
150	150	0.247
151	151	0.437
152	152	0.0454
153	153	0.817
154	154	0.466
155	155	0.636
156	156	0.527
157	157	0.383
158	158	0.816
159	159	0.293
16	16	0.0367
160	160	0.247
161	161	0.15
162	162	0.583
163	163	0.393
164	164	0.0925
165	165	0.207
166	166	0.995
167	167	0.635
168	168	0.0478
169	169	0.0109
17	17	0.0817
18	18	0.216
19	19	0.131
2	2	0.567
20	20	0.538
21	21	0.202
22	22	0.0937
23	23	0.155
24	24	0.0309
25	25	0.387
26	26	0.0276
27	27	0.38
28	28	0.696
29	29	0.0544
3	3	0.0489
30	30	0.677
31	31	0.715
32	32	0.052
33	33	0.116
34	34	0.488
35	35	0.545
36	36	0.164
37	37	0.0149
38	38	0.267
39	39	0.26
4	4	0.988
40	40	0.0403
41	41	0.246
42	42	0.213
43	43	0.116
44	44	0.198
45	45	0.533
46	46	0.221
47	47	0.0701
48	48	0.0838
49	49	0.197
5	5	0.274
50	50	0.322
51	51	0.388
52	52	0.344
53	53	0.948
54	54	0.308
55	55	0.749
56	56	0.386
57	57	0.574
58	58	0.259
59	59	0.0359
6	6	0.973
60	60	0.0416
61	61	0.0463
62	62	0.157
63	63	0.145
64	64	0.44
65	65	0.217
66	66	0.289
67	67	0.548
68	68	0.164
69	69	0.447
7	7	0.0435
70	70	0.0233
71	71	0.0185
72	72	0.146
73	73	0.0151
74	74	0.901
75	75	0.0413
76	76	0.584
77	77	0.124
78	78	0.00884
79	79	0.293
8	8	0.105
80	80	0.139
81	81	0.668
82	82	0.348
83	83	0.00247
84	84	0.838
85	85	0.0824
86	86	0.216
87	87	8.98971e-4
88	88	0.704
89	89	0.182
9	9	0.246
90	90	0.505
91	91	0.853
92	92	0.266
93	93	0.514
94	94	0.142
95	95	0.00576
96	96	0.385
97	97	0.796
98	98	0.263
99	99	0.563

library id: CNhs12996

Novel motif	Logo	P-value
1	1	0.25
10	10	0.181
100	100	0.556
101	101	0.769
102	102	0.359
103	103	0.7
104	104	0.624
105	105	0.119
106	106	0.521
107	107	0.0738
108	108	0.333
109	109	0.0774
11	11	0.576
110	110	0.298
111	111	0.43
112	112	0.0648
113	113	0.0118
114	114	0.837
115	115	0.111
116	116	0.368
117	117	0.00875
118	118	0.668
119	119	0.266
12	12	0.365
120	120	0.64
121	121	0.277
122	122	0.173
123	123	0.285
124	124	0.476
125	125	0.744
126	126	0.628
127	127	0.205
128	128	0.136
129	129	0.501
13	13	0.106
130	130	0.162
131	131	0.758
132	132	0.0133
133	133	0.49
134	134	0.974
135	135	0.0981
136	136	0.499
137	137	0.262
138	138	0.853
139	139	0.858
14	14	0.543
140	140	0.921
141	141	0.987
142	142	0.727
143	143	0.16
144	144	0.773
145	145	0.499
146	146	0.647
147	147	0.297
148	148	0.0911
149	149	0.153
15	15	0.191
150	150	0.429
151	151	0.489
152	152	0.636
153	153	0.847
154	154	0.656
155	155	0.539
156	156	0.67
157	157	0.574
158	158	0.836
159	159	0.126
16	16	0.791
160	160	0.62
161	161	0.688
162	162	0.635
163	163	0.388
164	164	0.561
165	165	0.517
166	166	0.264
167	167	0.579
168	168	0.568
169	169	0.801
17	17	0.957
18	18	0.0296
19	19	0.0251
2	2	0.00333
20	20	0.0105
21	21	0.469
22	22	0.716
23	23	0.197
24	24	0.539
25	25	0.592
26	26	0.726
27	27	0.087
28	28	0.573
29	29	0.0383
3	3	0.389
30	30	0.0791
31	31	0.489
32	32	3.21252e-6
33	33	0.362
34	34	0.535
35	35	0.999
36	36	0.0222
37	37	0.0818
38	38	0.715
39	39	0.689
4	4	0.477
40	40	0.0971
41	41	0.0118
42	42	0.259
43	43	0.914
44	44	0.313
45	45	0.684
46	46	0.902
47	47	0.563
48	48	0.633
49	49	0.615
5	5	0.736
50	50	0.982
51	51	0.644
52	52	0.235
53	53	0.854
54	54	0.762
55	55	0.822
56	56	0.784
57	57	0.234
58	58	0.85
59	59	0.158
6	6	0.872
60	60	0.384
61	61	0.246
62	62	0.909
63	63	0.711
64	64	0.915
65	65	0.654
66	66	0.00314
67	67	0.134
68	68	0.471
69	69	0.801
7	7	0.938
70	70	0.495
71	71	0.42
72	72	0.78
73	73	0.0187
74	74	0.21
75	75	0.0129
76	76	0.0166
77	77	0.252
78	78	0.582
79	79	0.166
8	8	0.862
80	80	0.284
81	81	0.501
82	82	0.501
83	83	0.979
84	84	0.742
85	85	0.109
86	86	0.177
87	87	0.00787
88	88	0.747
89	89	0.491
9	9	0.808
90	90	0.0592
91	91	0.0548
92	92	0.189
93	93	0.235
94	94	0.0266
95	95	0.00667
96	96	0.912
97	97	0.433
98	98	0.333
99	99	0.186

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11772
library id: CNhs12996

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010063 human duodenum - fetal sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002108 (small intestine)
0000160 (intestine)
0000479 (tissue)
0001007 (digestive system)
0000062 (organ)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0004921 (subdivision of digestive tract)
0005423 (developing anatomical structure)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0000925 (endoderm)
0006598 (presumptive structure)
0004185 (endodermal part of digestive tract)
0002532 (epiblast (generic))
0001555 (digestive tract)
0002114 (duodenum)
0005409 (gastrointestinal system)
0007026 (primitive gut)
0006595 (presumptive endoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr20:43935474..43935490,+!p1@RBPJL!2.40!249.17!RBPJL;;chr6:134210243..134210257,+!p1@TCF21!2.08!118.50!TCF21;;chr1:201979743..201979762,+!p1@ELF3!2.04!108.98!ELF3;;chr1:27240455..27240474,-!p1@NR0B2!1.93!84.64!NR0B2;;chr4:174451370..174451387,-!p1@HAND2!1.89!76.71!HAND2;;chr1:201979703..201979721,+!p2@ELF3!1.87!72.48!ELF3;;chr16:85932760..85932775,+!p1@IRF8!1.86!71.95!IRF8;;chr5:149546334..149546364,+!p1@CDX1!1.81!63.48!CDX1;;chr8:76319876..76319926,+!p1@HNF4G!1.81!62.95!HNF4G;;chr19:4153613..4153652,+!p1@CREB3L3!1.79!61.37!CREB3L3;;chr13:28494130..28494168,+!p1@PDX1!1.75!55.02!PDX1;;chr1:214161272..214161322,+!p1@PROX1!1.65!60.31!PROX1;;chr20:62680984..62680999,-!p1@SOX18!1.65!57.66!SOX18;;chr11:34642612..34642646,+!p1@EHF!1.65!43.91!EHF;;chr16:86544113..86544145,+!p1@FOXF1!1.62!50.26!FOXF1;;chr13:72441315..72441454,-!p1@DACH1!1.61!76.71!DACH1;;chr6:34524093..34524135,-!p1@SPDEF!1.60!39.15!SPDEF;;chr2:182545234..182545252,-!p1@NEUROD1!1.59!38.09!NEUROD1;;chr20:42984330..42984364,+!p2@HNF4A!1.59!37.56!HNF4A;;chr1:40105299..40105326,-!p1@HEYL!1.57!35.97!HEYL;;chr8:11561684..11561751,+!p1@GATA4!1.54!33.33!GATA4;;chr16:79634595..79634620,-!p2@MAF!1.52!58.19!MAF;;chr6:1312325..1312340,+!p1@FOXQ1!1.49!48.14!FOXQ1;;chr1:209979467..209979494,-!p1@IRF6!1.49!33.86!IRF6;;chr21:39870339..39870443,-!p1@ERG!1.49!30.15!ERG;;chr19:46801639..46801699,+!p1@HIF3A!1.49!29.63!HIF3A;;chr18:19749386..19749404,+!p2@GATA6!1.45!38.09!GATA6;;chr15:53082521..53082549,-!p1@ONECUT1!1.43!25.92!ONECUT1;;chr11:16419037..16419064,-!p3@SOX6!1.43!25.92!SOX6;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.42!25.39!ZBED1;;chr2:145277882..145277967,-!p3@ZEB2!1.41!41.79!ZEB2;;chr18:55102628..55102646,+!p2@ONECUT2!1.41!24.86!ONECUT2;;chr19:50922187..50922204,+!p1@SPIB!1.40!24.34!SPIB;;chr20:43029862..43029900,+!p1@HNF4A!1.40!24.34!HNF4A;;chr8:76452097..76452126,+!p2@HNF4G!1.40!24.34!HNF4G;;chr10:23481233..23481249,+!p1@PTF1A!1.39!23.81!PTF1A;;chr12:100897130..100897149,+!p3@NR1H4!1.38!22.75!NR1H4;;chr7:15726296..15726315,-!p1@MEOX2!1.37!22.22!MEOX2;;chr19:46800289..46800327,+!p2@HIF3A!1.36!21.69!HIF3A;;chr1:151804244..151804310,-!p1@RORC!1.35!21.16!RORC;;chr18:55102598..55102623,+!p1@ONECUT2!1.35!21.16!ONECUT2;;chr16:79634624..79634642,-!p1@MAF!1.34!80.94!MAF;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.32!20.10!PEG3;;chr20:20348740..20348757,+!p1@INSM1!1.31!19.57!INSM1;;chr18:19749541..19749557,+!p1@GATA6!1.30!58.19!GATA6;;chr1:42801540..42801562,-!p4@FOXJ3!1.29!18.52!FOXJ3;;chr13:28543431..28543487,-!p1@CDX2!1.29!18.52!CDX2;;chr3:71355163..71355209,-!p5@FOXP1!1.27!24.34!FOXP1;;chr3:169381420..169381535,-!p1@MECOM!1.27!20.63!MECOM;;chr2:166326200..166326216,+!p1@CSRNP3!1.26!24.86!CSRNP3;;chr11:61520075..61520136,+!p1@C11orf9!1.25!34.92!C11orf9;;chr13:28543285..28543314,-!p2@CDX2!1.25!16.93!CDX2;;chr17:36105042..36105060,-!p1@HNF1B!1.25!16.93!HNF1B;;chrX:25034067..25034088,-!p1@ARX!1.24!16.40!ARX;;chr15:57511609..57511651,+!p2@TCF12!1.23!26.45!TCF12;;chr20:50159198..50159299,-!p1@NFATC2!1.23!23.28!NFATC2;;chr1:2985760..2985774,+!p1@PRDM16!1.23!15.87!PRDM16;;chr22:38380543..38380569,-!p1@SOX10!1.23!15.87!SOX10;;chr12:52445218..52445237,+!p1@NR4A1!1.22!194.15!NR4A1;;chr19:33793430..33793447,-!p1@CEBPA!1.20!61.37!CEBPA;;chr3:119500941..119500961,+!p1@NR1I2!1.20!14.81!NR1I2;;chr7:156803329..156803362,-!p1@MNX1!1.20!14.81!MNX1;;chr7:73038839..73038862,-!p1@MLXIPL!1.20!14.81!MLXIPL;;chr7:15726243..15726293,-!p2@MEOX2!1.18!14.28!MEOX2;;chr10:101292684..101292706,+!p1@NKX2-3!1.18!14.28!NKX2-3;;chr2:68592406..68592424,+!p1@PLEK!1.17!13.75!PLEK;;chr1:200011711..200011752,+!p3@NR5A2!1.17!13.75!NR5A2;;chr6:1389789..1389821,+!p1@FOXF2!1.16!18.52!FOXF2;;chr13:73633131..73633149,+!p1@KLF5!1.15!139.13!KLF5;;chr12:96588368..96588394,+!p3@ELK3!1.15!35.44!ELK3;;chr5:50679228..50679288,+!p1@ISL1!1.15!13.23!ISL1;;chr16:79634581..79634592,-!p4@MAF!1.15!13.23!MAF;;chr20:51588873..51588953,+!p1@TSHZ2!1.14!16.93!TSHZ2;;chr19:46367576..46367592,+!p1@FOXA3!1.14!12.70!FOXA3;;chr6:391743..391759,+!p1@IRF4!1.14!12.70!IRF4;;chr5:88178983..88179012,-!p1@MEF2C!1.13!95.75!MEF2C;;chr8:25902876..25902936,-!p1@EBF2!1.12!12.17!EBF2;;chr20:22564895..22564910,-!p1@FOXA2!1.12!12.17!FOXA2;;chr11:47400078..47400106,-!p1@SPI1!1.12!12.17!SPI1;;chr4:109087445..109087463,-!p1@LEF1!1.12!12.17!LEF1;;chr11:113930425..113930471,+!p1@ZBTB16!1.10!16.93!ZBTB16;;chr3:12330560..12330579,+!p1@PPARG!1.10!13.23!PPARG;;chr1:199996733..199996781,+!p1@NR5A2!1.10!11.64!NR5A2;;chr7:113726357..113726443,+!p1@FOXP2!1.09!19.57!FOXP2;;chr3:114819124..114819200,-!p3@ZBTB20!1.08!25.92!ZBTB20;;chr3:27763807..27763822,-!p1@EOMES!1.06!10.58!EOMES;;chr7:115608319..115608352,-!p4@TFEC!1.06!10.58!TFEC;;chr8:102504651..102504683,+!p1@GRHL2!1.06!10.58!GRHL2;;chr13:28494109..28494122,+!p2@PDX1!1.06!10.58!PDX1;;chr2:19558373..19558392,-!p1@OSR1!1.05!28.04!OSR1;;chr5:158526917..158526932,-!p1@EBF1!1.04!25.39!EBF1;;chr12:52437488..52437507,+!p2@NR4A1!1.04!10.05!NR4A1;;chrX:85403445..85403479,+!p2@DACH2!1.04!10.05!DACH2;;chr20:30433396..30433414,-!p1@FOXS1!1.04!10.05!FOXS1;;chr17:41739283..41739297,-!p1@MEOX1!1.04!10.05!MEOX1;;chr8:60031619..60031676,-!p1@TOX!1.03!21.16!TOX;;chr1:164528410..164528428,+!p1@PBX1!1.02!72.48!PBX1;;chr10:48355030..48355090,+!p1@ZNF488!1.02!12.17!ZNF488;;chr13:28543388..28543406,-!p3@CDX2!1.02!9.52!CDX2;;chr17:46671108..46671147,-!p1@HOXB5!1.02!9.52!HOXB5;;chr3:128212033..128212051,-!p1@GATA2!1.02!9.52!GATA2;;chr4:149363494..149363543,-!p1@NR3C2!1.00!8.99!NR3C2;;chr11:125034605..125034636,+!p2@PKNOX2!1.00!8.99!PKNOX2;;chr1:199996831..199996843,+!p4@NR5A2!1.00!8.99!NR5A2;;chr5:71803177..71803255,-!p1@ZNF366!1.00!8.99!ZNF366;;chr6:144289132..144289134,-!p3@PLAGL1!0.99!20.63!PLAGL1;;chr17:1959369..1959388,+!p2@HIC1!0.98!23.28!HIC1;;chr18:19749517..19749531,+!p3@GATA6!0.98!15.34!GATA6;;chr11:125034640..125034655,+!p1@PKNOX2!0.98!8.46!PKNOX2;;chr5:133451294..133451310,+!p2@TCF7!0.98!8.46!TCF7;;chr19:46806868..46806883,+!p3@HIF3A!0.98!8.46!HIF3A;;chr1:199996702..199996732,+!p5@NR5A2!0.98!8.46!NR5A2;;chr2:66662249..66662267,+!p2@MEIS1!0.97!32.80!MEIS1;;chr8:71316428..71316459,-!p2@NCOA2!0.97!14.28!NCOA2;;chr3:18486354..18486377,-!p2@SATB1!0.97!10.58!SATB1;;chr11:47279248..47279264,+!p3@NR1H3!0.97!9.52!NR1H3;;chr5:134369905..134369972,-!p1@PITX1!0.96!12.70!PITX1;;chr5:153857778..153857794,-!p1@HAND1!0.95!7.94!HAND1;;chr7:27170359..27170381,-!p1@HOXA4!0.95!7.94!HOXA4;;chr8:76452129..76452159,+!p5@HNF4G!0.95!7.94!HNF4G;;chr11:65554528..65554546,+!p1@OVOL1!0.95!7.94!OVOL1;;chr4:174451350..174451363,-!p3@HAND2!0.95!7.94!HAND2;;chr1:10754477..10754517,-!p1@CASZ1!0.93!12.70!CASZ1;;chr3:24536253..24536328,-!p1@THRB!0.92!14.28!THRB;;chr6:117198400..117198441,+!p1@RFX6!0.92!7.41!RFX6;;chr8:55370487..55370503,+!p1@SOX17!0.92!7.41!SOX17;;chr6:19837592..19837621,+!p1@ID4!0.91!46.03!ID4;;chr2:60780753..60780800,-!p1@BCL11A!0.91!37.03!BCL11A;;chr6:91006518..91006570,-!p1@BACH2!0.91!16.93!BACH2;;chr5:178368186..178368238,+!p1@ZNF454!0.90!12.70!ZNF454;;chr15:37392576..37392589,-!p12@MEIS2!0.90!8.46!MEIS2;;chr10:8096631..8096660,+!p1@GATA3!0.90!8.46!GATA3;;chr17:53342311..53342400,+!p1@HLF!0.90!7.94!HLF;;chr4:94749897..94749909,+!p1@ATOH1!0.90!6.88!ATOH1;;chr7:27183291..27183324,-!p1@HOXA5!0.90!6.88!HOXA5;;chr8:10588010..10588030,-!p1@SOX7!0.90!6.88!SOX7;;chr8:41508327..41508355,-!p1@NKX6-3!0.90!6.88!NKX6-3;;chr20:22565370..22565388,-!p2@FOXA2!0.90!6.88!FOXA2;;chr20:61051039..61051057,-!p1@GATA5!0.90!6.88!GATA5;;chr10:131762504..131762555,-!p1@EBF3!0.90!6.88!EBF3;;chr11:31839488..31839515,-!p3@PAX6!0.90!6.88!PAX6;;chr11:66188503..66188511,+!p1@NPAS4!0.90!6.88!NPAS4;;chr13:72441074..72441172,-!p2@DACH1!0.90!6.88!DACH1;;chr2:100759037..100759058,-!p2@AFF3!0.90!6.88!AFF3;;chr2:70142232..70142251,+!p1@MXD1!0.89!40.21!MXD1;;chr18:22932080..22932170,-!p1@ZNF521!0.89!30.15!ZNF521;;chr2:66662281..66662308,+!p1@MEIS1!0.89!24.34!MEIS1;;chr2:192015701..192015743,-!p1@STAT4!0.89!9.52!STAT4;;chr17:70117153..70117174,+!p1@SOX9!0.88!71.42!SOX9;;chr11:46299199..46299233,+!p1@CREB3L1!0.88!35.97!CREB3L1;;chr2:25475120..25475176,-!p2@DNMT3A!0.88!8.99!DNMT3A;;chr9:14314131..14314147,-!p2@NFIB!0.87!38.09!NFIB;;chr9:102584262..102584276,+!p1@NR4A3!0.87!14.81!NR4A3;;chr20:50179368..50179392,-!p2@NFATC2!0.87!8.46!NFATC2;;chr19:54041669..54041697,+!p2@ZNF331!0.87!6.35!ZNF331;;chr1:63788229..63788250,+!p1@FOXD3!0.87!6.35!FOXD3;;chr11:34645791..34645836,+!p3@EHF!0.87!6.35!EHF;;chr13:28543253..28543276,-!p5@CDX2!0.87!6.35!CDX2;;chr2:122042770..122042785,-!p1@TFCP2L1!0.87!6.35!TFCP2L1;;chr2:16080659..16080685,+!p1@MYCN!0.87!6.35!MYCN;;chr7:27183263..27183284,-!p2@HOXA5!0.87!6.35!HOXA5;;chr18:53089538..53089578,-!p14@TCF4!0.87!6.35!TCF4;;chr19:58220517..58220583,-!p1@ZNF154!0.86!20.63!ZNF154;;chr11:47279504..47279563,+!p1@NR1H3!0.86!14.81!NR1H3;;chr20:39317868..39317884,-!p1@MAFB!0.85!76.71!MAFB;;chr15:37392616..37392638,-!p2@MEIS2!0.85!20.10!MEIS2;;chrX:84498989..84499003,+!p1@ZNF711!0.85!8.46!ZNF711;;chr2:60780607..60780624,-!p2@BCL11A!0.84!19.04!BCL11A;;chr18:77155922..77155939,+!p1@NFATC1!0.84!16.93!NFATC1;;chr9:117150254..117150271,-!p1@AKNA!0.84!16.93!AKNA;;chr13:73636516..73636532,+!p3@KLF5!0.84!6.88!KLF5;;chr6:144329384..144329405,-!p1@PLAGL1!0.83!71.95!PLAGL1;;chr15:96873984..96873999,+!p3@NR2F2!0.83!45.50!NR2F2;;chr1:221052840..221052875,+!p4@HLX!0.83!6.88!HLX;;chr1:25291475..25291511,-!p2@RUNX3!0.83!5.82!RUNX3;;chr17:6926362..6926377,+!p1@BCL6B!0.83!5.82!BCL6B;;chr11:125034586..125034604,+!p3@PKNOX2!0.83!5.82!PKNOX2;;chr11:16629261..16629284,-!p1@SOX6!0.83!5.82!SOX6;;chr11:34535297..34535317,-!p1@ELF5!0.83!5.82!ELF5;;chr11:71955210..71955227,-!p1@PHOX2A!0.83!5.82!PHOX2A;;chr14:38064429..38064486,-!p1@FOXA1!0.83!5.82!FOXA1;;chr3:114819101..114819121,-!p7@ZBTB20!0.83!5.82!ZBTB20;;chr3:141043050..141043063,+!p22@ZBTB38!0.83!5.82!ZBTB38;;chr7:27170274..27170308,-!p3@HOXA4!0.83!5.82!HOXA4;;chr7:50343634..50343717,+!p2@IKZF1!0.83!5.82!IKZF1;;chr7:50344289..50344323,+!p1@IKZF1!0.83!5.82!IKZF1;;chr10:35484053..35484076,+!p1@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FF:10063-101H9: Difference between revisions

From FANTOM5_SSTAR

Revision as of 19:19, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0