FFCP PHASE1:Hg19::chr1:59844019..59844033,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C99|description=CAGE_peak_at_chr1:59844019..59844033,+|id=chr1:59844019..59844033,+|ontology_enrichment_celltype=CL:0000453!4.38e-11!5;CL:0002057!6.11e-09!42;CL:0000860!4.57e-08!45|ontology_enrichment_celltype_v019=CL:0000453;7.44e-14;5!CL:0000860;8.15e-13;33!CL:0002057;8.15e-13;33!CL:0000473;1.11e-08;39!CL:0000234;1.11e-08;39!CL:0000990;6.38e-08;8|ontology_enrichment_celltype_v019_2=CL:0000453,4.00e-14,5;CL:0000860,3.11e-10,42;CL:0002057,3.11e-10,42;CL:0000473,8.09e-09,48;CL:0000234,8.09e-09,48;CL:0000990,4.55e-08,8;CL:0000988,1.06e-07,177;CL:0000738,7.50e-07,136;CL:0002194,7.74e-07,59;CL:0000576,7.74e-07,59;CL:0000040,7.74e-07,59;CL:0000559,7.74e-07,59|ontology_enrichment_development_v019=UBERON:0010115;1.32e-08;1!CL:0002057;4.84e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;4.70e-09;1!DOID:0060061;4.70e-09;1!DOID:8691;4.70e-09;1|ontology_enrichment_disease_v019_2=DOID:0060060,4.52e-09,1;DOID:0060061,4.52e-09,1;DOID:8691,4.52e-09,1|ontology_enrichment_uberon=UBERON:0002390!3.63e-07!102;UBERON:0003061!3.63e-07!102;UBERON:0001474!4.13e-07!86|ontology_enrichment_uberon_v019=UBERON:0002363;1.32e-08;1!UBERON:0002331;3.17e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002363,9.74e-09,1;UBERON:0007645,9.74e-09,1;UBERON:0007647,9.74e-09,1;UBERON:0010115,9.74e-09,1;UBERON:0002390,1.35e-08,98;UBERON:0003061,1.35e-08,98;UBERON:0002193,1.29e-07,108;UBERON:0002331,3.57e-07,10;UBERON:0000358,3.57e-07,10;UBERON:0000307,3.57e-07,10;UBERON:0000091,3.57e-07,10;UBERON:0000087,3.57e-07,10;UBERON:0007010,3.57e-07,10;UBERON:0007806,3.57e-07,10;UBERON:0008780,3.57e-07,10;UBERON:0005728,3.57e-07,10|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23350366406548,0.619412741790207,0,0,0,2.41321976515633,2.5819387343353,0,0,0.545812300115692,0.674170453335254,1.53041946185451,2.88836124368484,2.55734850319616,0,0,0,0.870627715885752,1.13477044938228,0.622822248995575,0,0,0.217188844705117,0.605399502633369,4.78760926783834,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20378439891088,11.3703752027992,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.386682873168488,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,1.84296421259539,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,4.15129580152871,1.35920332841153,1.25306339406546,0,0,0,0,0,0,0,0,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,3.17845648891671,0,0,0,0,97.2683210833464,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.221858103073705,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,1.50940741051545,0,0,0,0.15543720058278,0,0.159296767163702,0.899606224327209,0,0,0,0,0.901545653983311,1.52322084867518,0.406870733204662,0,0.107410557042488,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,2.79016164658062,1.96278473107013,0,0,0,3.59977312538874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,5.89392132762208,0.955538938977433,0,0.196300467230486,0,0,0,1.1598144313382,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:59844019..59844033,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_at_chr1:59844019..59844033,+ | |||
|id=chr1:59844019..59844033,+ | |||
|ontology_enrichment_celltype=CL:0000453!4.38e-11!5;CL:0002057!6.11e-09!42;CL:0000860!4.57e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000453;7.44e-14;5!CL:0000860;8.15e-13;33!CL:0002057;8.15e-13;33!CL:0000473;1.11e-08;39!CL:0000234;1.11e-08;39!CL:0000990;6.38e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.00e-14,5;CL:0000860,3.11e-10,42;CL:0002057,3.11e-10,42;CL:0000473,8.09e-09,48;CL:0000234,8.09e-09,48;CL:0000990,4.55e-08,8;CL:0000988,1.06e-07,177;CL:0000738,7.50e-07,136;CL:0002194,7.74e-07,59;CL:0000576,7.74e-07,59;CL:0000040,7.74e-07,59;CL:0000559,7.74e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.32e-08;1!CL:0002057;4.84e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.70e-09;1!DOID:0060061;4.70e-09;1!DOID:8691;4.70e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.52e-09,1;DOID:0060061,4.52e-09,1;DOID:8691,4.52e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.63e-07!102;UBERON:0003061!3.63e-07!102;UBERON:0001474!4.13e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.32e-08;1!UBERON:0002331;3.17e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,9.74e-09,1;UBERON:0007645,9.74e-09,1;UBERON:0007647,9.74e-09,1;UBERON:0010115,9.74e-09,1;UBERON:0002390,1.35e-08,98;UBERON:0003061,1.35e-08,98;UBERON:0002193,1.29e-07,108;UBERON:0002331,3.57e-07,10;UBERON:0000358,3.57e-07,10;UBERON:0000307,3.57e-07,10;UBERON:0000091,3.57e-07,10;UBERON:0000087,3.57e-07,10;UBERON:0007010,3.57e-07,10;UBERON:0007806,3.57e-07,10;UBERON:0008780,3.57e-07,10;UBERON:0005728,3.57e-07,10 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23350366406548,0.619412741790207,0,0,0,2.41321976515633,2.5819387343353,0,0,0.545812300115692,0.674170453335254,1.53041946185451,2.88836124368484,2.55734850319616,0,0,0,0.870627715885752,1.13477044938228,0.622822248995575,0,0,0.217188844705117,0.605399502633369,4.78760926783834,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20378439891088,11.3703752027992,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.386682873168488,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,1.84296421259539,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,4.15129580152871,1.35920332841153,1.25306339406546,0,0,0,0,0,0,0,0,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,3.17845648891671,0,0,0,0,97.2683210833464,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.221858103073705,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,1.50940741051545,0,0,0,0.15543720058278,0,0.159296767163702,0.899606224327209,0,0,0,0,0.901545653983311,1.52322084867518,0.406870733204662,0,0.107410557042488,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,2.79016164658062,1.96278473107013,0,0,0,3.59977312538874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,5.89392132762208,0.955538938977433,0,0.196300467230486,0,0,0,1.1598144313382,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:59844019..59844033,+ | |||
}} |
Revision as of 06:17, 12 September 2013
Short description: | p@chr1:59844019..59844033, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:59844019..59844033, + |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.00e-14 | 5 |
classical monocyte | 3.11e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.11e-10 | 42 |
defensive cell | 8.09e-09 | 48 |
phagocyte | 8.09e-09 | 48 |
conventional dendritic cell | 4.55e-08 | 8 |
hematopoietic cell | 1.06e-07 | 177 |
leukocyte | 7.50e-07 | 136 |
monopoietic cell | 7.74e-07 | 59 |
monocyte | 7.74e-07 | 59 |
monoblast | 7.74e-07 | 59 |
promonocyte | 7.74e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
dura mater | 9.74e-09 | 1 |
future meninx | 9.74e-09 | 1 |
ectomeninx | 9.74e-09 | 1 |
future dura mater | 9.74e-09 | 1 |
hematopoietic system | 1.35e-08 | 98 |
blood island | 1.35e-08 | 98 |
hemolymphoid system | 1.29e-07 | 108 |
umbilical cord | 3.57e-07 | 10 |
blastocyst | 3.57e-07 | 10 |
blastula | 3.57e-07 | 10 |
bilaminar disc | 3.57e-07 | 10 |
inner cell mass | 3.57e-07 | 10 |
cleaving embryo | 3.57e-07 | 10 |
connecting stalk | 3.57e-07 | 10 |
inner cell mass derived epiblast | 3.57e-07 | 10 |
extraembryonic mesoderm | 3.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.52e-09 | 1 |
cutaneous T cell lymphoma | 4.52e-09 | 1 |
mycosis fungoides | 4.52e-09 | 1 |
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