FFCP PHASE1:Hg19::chr1:70033632..70033637,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18531|TSSclassifier=W|UniProt=|association_with_transcript=-443bp_to_ENST00000310961_5end|coexpression_cluster_id=C10|description=CAGE_peak_17_at_LRRC7_5end|id=chr1:70033632..70033637,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;6.05e-13;1!CL:0000164;6.05e-13;1!CL:0000502;6.05e-13;1!CL:0000172;6.05e-13;1!CL:0000173;6.05e-13;1!CL:0000540;1.12e-08;6!CL:0000404;1.12e-08;6|ontology_enrichment_celltype_v019_2=CL:0000167,7.68e-13,1;CL:0000164,7.68e-13,1;CL:0000502,7.68e-13,1;CL:0000172,7.68e-13,1;CL:0000173,7.68e-13,1;CL:0002351,7.68e-13,1;CL:0000540,9.27e-09,6;CL:0000031,9.27e-09,6;CL:0000404,9.27e-09,6;CL:0000047,8.85e-07,8|ontology_enrichment_development_v019=UBERON:0010122;6.67e-25;2!CL:0002351;6.05e-13;1!CL:0000031;1.12e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;6.05e-13;1|ontology_enrichment_disease_v019_2=DOID:4430,7.68e-13,1|ontology_enrichment_uberon=UBERON:0002780!7.62e-65!41;UBERON:0001890!7.62e-65!41;UBERON:0006240!7.62e-65!41;UBERON:0001893!1.56e-63!34;UBERON:0003080!3.82e-63!42;UBERON:0001869!5.30e-63!32;UBERON:0002791!1.16e-60!33;UBERON:0001049!4.75e-58!57;UBERON:0005068!4.75e-58!57;UBERON:0006241!4.75e-58!57;UBERON:0007135!4.75e-58!57;UBERON:0002020!2.34e-54!34;UBERON:0003528!2.34e-54!34;UBERON:0002619!4.95e-54!22;UBERON:0002616!2.49e-52!59;UBERON:0001017!9.67e-51!82;UBERON:0005743!5.66e-48!86;UBERON:0001950!8.69e-48!20;UBERON:0000956!3.69e-47!25;UBERON:0000203!3.69e-47!25;UBERON:0000955!1.12e-45!69;UBERON:0006238!1.12e-45!69;UBERON:0000073!5.89e-45!94;UBERON:0001016!5.89e-45!94;UBERON:0003056!2.88e-41!61;UBERON:0003075!2.39e-40!86;UBERON:0007284!2.39e-40!86;UBERON:0002346!3.70e-38!90;UBERON:0007023!1.22e-27!115;UBERON:0004121!1.15e-23!169;UBERON:0000033!1.18e-23!123;UBERON:0000924!6.86e-23!173;UBERON:0006601!6.86e-23!173;UBERON:0000153!3.71e-22!129;UBERON:0007811!3.71e-22!129;UBERON:0001871!3.09e-20!7;UBERON:0002420!3.84e-18!9;UBERON:0007245!3.84e-18!9;UBERON:0010009!3.84e-18!9;UBERON:0010011!3.84e-18!9;UBERON:0000454!3.84e-18!9;UBERON:0000349!1.59e-17!5;UBERON:0000025!3.58e-17!194;UBERON:0001872!8.39e-17!5;UBERON:0000369!1.52e-14!4;UBERON:0002435!1.52e-14!4;UBERON:0000204!1.52e-14!4;UBERON:0010082!1.52e-14!4;UBERON:0000200!1.06e-13!6;UBERON:0009663!3.33e-12!7;UBERON:0004111!5.96e-12!241;UBERON:0005383!1.92e-11!3;UBERON:0005382!1.92e-11!3;UBERON:0002021!5.56e-11!5;UBERON:0002771!9.66e-11!3;UBERON:0000477!4.45e-10!286;UBERON:0000483!5.03e-10!309;UBERON:0000119!7.86e-10!312;UBERON:0000064!1.35e-09!219;UBERON:0002308!2.10e-09!9;UBERON:0000125!2.10e-09!9;UBERON:0001873!2.34e-08!2;UBERON:0010122!2.34e-08!2;UBERON:0001876!3.94e-08!2;UBERON:0001954!5.54e-08!2;UBERON:0003022!5.54e-08!2;UBERON:0002421!5.54e-08!2;UBERON:0002600!5.54e-08!2;UBERON:0001897!6.13e-08!2|ontology_enrichment_uberon_v019=UBERON:0001869;5.62e-27;32!UBERON:0002791;8.74e-26;32!UBERON:0001873;6.67e-25;2!UBERON:0003528;1.43e-24;34!UBERON:0002020;1.43e-24;34!UBERON:0002619;1.85e-24;22!UBERON:0001876;4.22e-24;2!UBERON:0002780;3.71e-23;41!UBERON:0001890;3.71e-23;41!UBERON:0001893;1.02e-22;34!UBERON:0000956;1.40e-21;25!UBERON:0000203;1.40e-21;25!UBERON:0000349;1.96e-21;5!UBERON:0002420;3.46e-21;9!UBERON:0007245;3.46e-21;9!UBERON:0010009;3.46e-21;9!UBERON:0010011;3.46e-21;9!UBERON:0000454;3.46e-21;9!UBERON:0001950;6.52e-20;20!UBERON:0005383;5.97e-17;3!UBERON:0005382;5.97e-17;3!UBERON:0001871;1.07e-15;6!UBERON:0000073;9.94e-14;53!UBERON:0002616;9.94e-14;53!UBERON:0000369;5.89e-13;4!UBERON:0002435;5.89e-13;4!UBERON:0000204;5.89e-13;4!UBERON:0001872;1.86e-10;5!UBERON:0000955;3.84e-08;68!UBERON:0009663;8.78e-08;7!UBERON:0001016;2.42e-07;83!UBERON:0001897;4.17e-07;2!UBERON:0001954;4.17e-07;2!UBERON:0003022;4.17e-07;2!UBERON:0002421;4.17e-07;2!UBERON:0010225;4.17e-07;2!UBERON:0002600;4.17e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002791,6.40e-28,32;UBERON:0001869,6.40e-28,32;UBERON:0002780,7.87e-27,41;UBERON:0001890,7.87e-27,41;UBERON:0003080,7.87e-27,41;UBERON:0006240,7.87e-27,41;UBERON:0003528,2.86e-26,34;UBERON:0002020,2.86e-26,34;UBERON:0001893,2.86e-26,34;UBERON:0001873,6.29e-25,2;UBERON:0010122,6.29e-25,2;UBERON:0002619,1.72e-24,22;UBERON:0001876,3.76e-24,2;UBERON:0000956,1.32e-21,25;UBERON:0000203,1.32e-21,25;UBERON:0000349,1.96e-21,5;UBERON:0002420,3.21e-21,9;UBERON:0007245,3.21e-21,9;UBERON:0010009,3.21e-21,9;UBERON:0010011,3.21e-21,9;UBERON:0000454,3.21e-21,9;UBERON:0000073,1.32e-20,53;UBERON:0002616,1.32e-20,53;UBERON:0001950,5.91e-20,20;UBERON:0001049,1.85e-19,56;UBERON:0005068,1.85e-19,56;UBERON:0006241,1.85e-19,56;UBERON:0007135,1.85e-19,56;UBERON:0001017,7.21e-19,81;UBERON:0003056,8.60e-18,61;UBERON:0005383,5.75e-17,3;UBERON:0005382,5.75e-17,3;UBERON:0001016,7.18e-17,89;UBERON:0001871,1.07e-15,6;UBERON:0000955,1.28e-15,68;UBERON:0006238,1.28e-15,68;UBERON:0003075,5.65e-13,82;UBERON:0007284,5.65e-13,82;UBERON:0000369,5.72e-13,4;UBERON:0002435,5.72e-13,4;UBERON:0000204,5.72e-13,4;UBERON:0010082,5.72e-13,4;UBERON:0002346,2.55e-12,86;UBERON:0001872,1.69e-10,5;UBERON:0010371,5.51e-10,104;UBERON:0010314,2.94e-09,132;UBERON:0004121,3.82e-08,171;UBERON:0000924,3.82e-08,171;UBERON:0006601,3.82e-08,171;UBERON:0009663,8.64e-08,7;UBERON:0001897,3.48e-07,2;UBERON:0010225,3.48e-07,2;UBERON:0001954,4.42e-07,2;UBERON:0003022,4.42e-07,2;UBERON:0002421,4.42e-07,2;UBERON:0002600,4.42e-07,2;UBERON:0011216,5.12e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,3.54296554325536,2.77371808838438,0,0,0,0,0.10893846351899,0,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,3.0607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.500763722825999,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.834979926253974,0,0.319267718114302,0.41023272848151,3.78107544332577,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.472763092328763,1.56215619722769,0.620060389503552,0.253663240775627,4.37579847214576,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0.394636641377094,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0.301925687133347,0,0,0.940634592723046,0,1.17838273550813,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.620597975171371,0,0,0,0,1.00918676322552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p17@LRRC7}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=57554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18531 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-443bp_to_ENST00000310961_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_17_at_LRRC7_5end | |||
|id=chr1:70033632..70033637,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;6.05e-13;1!CL:0000164;6.05e-13;1!CL:0000502;6.05e-13;1!CL:0000172;6.05e-13;1!CL:0000173;6.05e-13;1!CL:0000540;1.12e-08;6!CL:0000404;1.12e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.68e-13,1;CL:0000164,7.68e-13,1;CL:0000502,7.68e-13,1;CL:0000172,7.68e-13,1;CL:0000173,7.68e-13,1;CL:0002351,7.68e-13,1;CL:0000540,9.27e-09,6;CL:0000031,9.27e-09,6;CL:0000404,9.27e-09,6;CL:0000047,8.85e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.67e-25;2!CL:0002351;6.05e-13;1!CL:0000031;1.12e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;6.05e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,7.68e-13,1 | |||
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|short_description=p17@LRRC7 | |||
}} |
Revision as of 06:38, 12 September 2013
Short description: | p17@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -443bp_to_ENST00000310961_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.68e-13 | 1 |
enteroendocrine cell | 7.68e-13 | 1 |
type D enteroendocrine cell | 7.68e-13 | 1 |
somatostatin secreting cell | 7.68e-13 | 1 |
pancreatic D cell | 7.68e-13 | 1 |
progenitor cell of endocrine pancreas | 7.68e-13 | 1 |
neuron | 9.27e-09 | 6 |
neuroblast | 9.27e-09 | 6 |
electrically signaling cell | 9.27e-09 | 6 |
neuronal stem cell | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.68e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.