FFCP PHASE1:Hg19::chr1:111415757..111415779,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=963|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1686|TSSclassifier=S|UniProt=P19397,B4DQB5|association_with_transcript=0bp_to_ENST00000271324,ENST00000429072,ENST00000468160,uc001dzy.2,uc010owa.1_5end|coexpression_cluster_id=C26|description=CAGE_peak_1_at_CD53_5end|id=chr1:111415757..111415779,+|ontology_enrichment_celltype=CL:0000037!1.27e-86!172;CL:0000566!1.27e-86!172;CL:0002032!3.51e-82!165;CL:0000837!3.51e-82!165;CL:0000988!1.18e-81!182;CL:0000738!6.19e-78!140;CL:0002031!1.71e-66!124;CL:0002087!4.31e-65!119;CL:0000763!2.08e-51!112;CL:0000049!2.08e-51!112;CL:0000766!1.90e-43!76;CL:0000557!1.38e-38!71;CL:0000839!1.13e-37!70;CL:0002009!1.75e-36!65;CL:0002194!1.59e-35!63;CL:0000576!1.59e-35!63;CL:0000040!1.59e-35!63;CL:0000559!1.59e-35!63;CL:0002057!1.02e-32!42;CL:0000860!1.05e-29!45;CL:0000542!1.38e-25!53;CL:0000051!1.38e-25!53;CL:0000838!3.25e-25!52;CL:0000084!7.37e-13!25;CL:0000827!7.37e-13!25;CL:0000134!2.59e-12!358;CL:0000945!3.91e-12!24;CL:0000826!3.91e-12!24;CL:0002320!4.49e-11!365;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0000236!2.01e-08!14;CL:0000219!1.43e-07!390;CL:0000625!1.93e-07!11;CL:0002393!2.83e-07!9;CL:0002397!2.83e-07!9;CL:0000094!4.88e-07!8|ontology_enrichment_celltype_v019=CL:0000860;2.17e-25;33!CL:0002057;2.17e-25;33!CL:0000473;2.39e-24;39!CL:0000234;2.39e-24;39!CL:0000576;6.62e-23;48!CL:0000766;3.93e-20;69!CL:0002087;5.29e-19;104!CL:0000738;1.22e-17;136!CL:0000763;3.09e-16;100!CL:0000542;1.39e-15;53!CL:0000988;1.10e-14;177!CL:0000084;2.46e-13;25!CL:0000945;1.44e-12;24!CL:0000791;4.47e-11;18!CL:0000789;4.47e-11;18!CL:0002419;4.47e-11;18!CL:0000236;3.05e-08;13!CL:0000625;1.10e-07;11!CL:0000094;2.88e-07;8!CL:0000219;5.16e-07;193|ontology_enrichment_celltype_v019_2=CL:0000037,9.27e-93,168;CL:0000988,1.43e-88,177;CL:0002032,3.99e-88,161;CL:0000837,3.99e-88,161;CL:0000738,5.62e-84,136;CL:0002031,5.20e-72,120;CL:0002087,1.30e-70,115;CL:0000763,5.14e-56,108;CL:0000049,5.14e-56,108;CL:0000766,2.69e-48,72;CL:0000557,4.16e-43,67;CL:0000839,3.92e-42,66;CL:0002009,5.09e-41,61;CL:0002194,4.87e-40,59;CL:0000576,4.87e-40,59;CL:0000040,4.87e-40,59;CL:0000559,4.87e-40,59;CL:0000473,8.50e-38,48;CL:0000234,8.50e-38,48;CL:0000860,5.14e-34,42;CL:0002057,5.14e-34,42;CL:0000542,1.38e-26,53;CL:0000051,1.38e-26,53;CL:0000838,3.38e-26,52;CL:0000134,1.76e-14,354;CL:0000084,2.51e-13,25;CL:0000827,2.51e-13,25;CL:0002320,3.51e-13,361;CL:0000945,1.43e-12,24;CL:0000826,1.43e-12,24;CL:0000791,4.47e-11,18;CL:0000789,4.47e-11,18;CL:0002420,4.47e-11,18;CL:0002419,4.47e-11,18;CL:0000790,4.47e-11,18;CL:0000219,6.79e-09,386;CL:0000236,1.04e-08,14;CL:0000625,1.10e-07,11;CL:0002393,1.64e-07,9;CL:0002397,1.64e-07,9;CL:0000094,2.89e-07,8|ontology_enrichment_development_v019=CL:0002057;1.53e-24;42!CL:0000051;1.39e-15;53!CL:0000049;1.84e-15;108!CL:0000790;4.47e-11;18|ontology_enrichment_disease=DOID:2531!4.94e-13!51;DOID:0060083!4.94e-13!51;DOID:1240!2.24e-10!39;DOID:8692!9.74e-08!31|ontology_enrichment_disease_v019=DOID:1240;1.57e-08;39!DOID:2531;4.03e-08;51!DOID:0060083;4.03e-08;51!DOID:8692;9.75e-08;31|ontology_enrichment_disease_v019_2=DOID:2531,4.62e-13,51;DOID:0060083,4.62e-13,51;DOID:1240,9.04e-11,39;DOID:8692,5.06e-08,31|ontology_enrichment_uberon=UBERON:0002390!4.40e-45!102;UBERON:0003061!4.40e-45!102;UBERON:0002193!1.78e-39!112;UBERON:0002371!6.23e-33!80;UBERON:0001474!3.02e-28!86;UBERON:0002405!5.22e-24!115;UBERON:0007023!1.40e-23!115;UBERON:0004765!2.02e-20!101;UBERON:0001434!2.02e-20!101;UBERON:0002384!4.94e-10!375;UBERON:0000178!2.00e-09!15;UBERON:0000179!2.00e-09!15;UBERON:0000463!2.00e-09!15;UBERON:0003081!2.93e-09!216|ontology_enrichment_uberon_v019=UBERON:0000178;9.47e-10;15!UBERON:0000179;9.47e-10;15!UBERON:0000463;9.47e-10;15!UBERON:0007023;7.98e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-49,98;UBERON:0003061,1.26e-49,98;UBERON:0002193,1.26e-43,108;UBERON:0002371,7.55e-37,76;UBERON:0002405,1.48e-34,93;UBERON:0001474,9.71e-32,82;UBERON:0004765,4.26e-26,90;UBERON:0007023,2.69e-24,114;UBERON:0001434,1.31e-21,100;UBERON:0003081,6.36e-12,203;UBERON:0002384,7.15e-12,371;UBERON:0000178,9.44e-10,15;UBERON:0000179,9.44e-10,15;UBERON:0000463,9.44e-10,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4295274896802,0,0,0,0,0,0,0,0,0,175.063112568556,149.505173388351,162.38034185012,468.496853727045,333.931576344575,208.227685860122,0,0,0,95.7494599172528,94.2582011391605,206.107508413063,306.91345632666,400.888350492813,240.231033882448,366.773546804996,382.842313234434,334.590662356808,701.982696827738,716.074913290294,623.683621313875,916.932550592926,858.518550189572,1006.23599903819,1920.05902635803,1622.00959374227,2149.15050522746,1002.17569390135,853.976236381402,961.528054819826,802.288851130581,966.63358350489,1083.39191850975,1347.38129421671,1391.54826140194,1232.00264141475,1399.88891799242,1387.26973875845,1365.19787595622,1467.58811974475,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=963 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1686 | |||
|TSSclassifier=S | |||
|UniProt=P19397,B4DQB5 | |||
|association_with_transcript=0bp_to_ENST00000271324,ENST00000429072,ENST00000468160,uc001dzy.2,uc010owa.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_CD53_5end | |||
|id=chr1:111415757..111415779,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.27e-86!172;CL:0000566!1.27e-86!172;CL:0002032!3.51e-82!165;CL:0000837!3.51e-82!165;CL:0000988!1.18e-81!182;CL:0000738!6.19e-78!140;CL:0002031!1.71e-66!124;CL:0002087!4.31e-65!119;CL:0000763!2.08e-51!112;CL:0000049!2.08e-51!112;CL:0000766!1.90e-43!76;CL:0000557!1.38e-38!71;CL:0000839!1.13e-37!70;CL:0002009!1.75e-36!65;CL:0002194!1.59e-35!63;CL:0000576!1.59e-35!63;CL:0000040!1.59e-35!63;CL:0000559!1.59e-35!63;CL:0002057!1.02e-32!42;CL:0000860!1.05e-29!45;CL:0000542!1.38e-25!53;CL:0000051!1.38e-25!53;CL:0000838!3.25e-25!52;CL:0000084!7.37e-13!25;CL:0000827!7.37e-13!25;CL:0000134!2.59e-12!358;CL:0000945!3.91e-12!24;CL:0000826!3.91e-12!24;CL:0002320!4.49e-11!365;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0000236!2.01e-08!14;CL:0000219!1.43e-07!390;CL:0000625!1.93e-07!11;CL:0002393!2.83e-07!9;CL:0002397!2.83e-07!9;CL:0000094!4.88e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-25;33!CL:0002057;2.17e-25;33!CL:0000473;2.39e-24;39!CL:0000234;2.39e-24;39!CL:0000576;6.62e-23;48!CL:0000766;3.93e-20;69!CL:0002087;5.29e-19;104!CL:0000738;1.22e-17;136!CL:0000763;3.09e-16;100!CL:0000542;1.39e-15;53!CL:0000988;1.10e-14;177!CL:0000084;2.46e-13;25!CL:0000945;1.44e-12;24!CL:0000791;4.47e-11;18!CL:0000789;4.47e-11;18!CL:0002419;4.47e-11;18!CL:0000236;3.05e-08;13!CL:0000625;1.10e-07;11!CL:0000094;2.88e-07;8!CL:0000219;5.16e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.27e-93,168;CL:0000988,1.43e-88,177;CL:0002032,3.99e-88,161;CL:0000837,3.99e-88,161;CL:0000738,5.62e-84,136;CL:0002031,5.20e-72,120;CL:0002087,1.30e-70,115;CL:0000763,5.14e-56,108;CL:0000049,5.14e-56,108;CL:0000766,2.69e-48,72;CL:0000557,4.16e-43,67;CL:0000839,3.92e-42,66;CL:0002009,5.09e-41,61;CL:0002194,4.87e-40,59;CL:0000576,4.87e-40,59;CL:0000040,4.87e-40,59;CL:0000559,4.87e-40,59;CL:0000473,8.50e-38,48;CL:0000234,8.50e-38,48;CL:0000860,5.14e-34,42;CL:0002057,5.14e-34,42;CL:0000542,1.38e-26,53;CL:0000051,1.38e-26,53;CL:0000838,3.38e-26,52;CL:0000134,1.76e-14,354;CL:0000084,2.51e-13,25;CL:0000827,2.51e-13,25;CL:0002320,3.51e-13,361;CL:0000945,1.43e-12,24;CL:0000826,1.43e-12,24;CL:0000791,4.47e-11,18;CL:0000789,4.47e-11,18;CL:0002420,4.47e-11,18;CL:0002419,4.47e-11,18;CL:0000790,4.47e-11,18;CL:0000219,6.79e-09,386;CL:0000236,1.04e-08,14;CL:0000625,1.10e-07,11;CL:0002393,1.64e-07,9;CL:0002397,1.64e-07,9;CL:0000094,2.89e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-24;42!CL:0000051;1.39e-15;53!CL:0000049;1.84e-15;108!CL:0000790;4.47e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!4.94e-13!51;DOID:0060083!4.94e-13!51;DOID:1240!2.24e-10!39;DOID:8692!9.74e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.57e-08;39!DOID:2531;4.03e-08;51!DOID:0060083;4.03e-08;51!DOID:8692;9.75e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.62e-13,51;DOID:0060083,4.62e-13,51;DOID:1240,9.04e-11,39;DOID:8692,5.06e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.40e-45!102;UBERON:0003061!4.40e-45!102;UBERON:0002193!1.78e-39!112;UBERON:0002371!6.23e-33!80;UBERON:0001474!3.02e-28!86;UBERON:0002405!5.22e-24!115;UBERON:0007023!1.40e-23!115;UBERON:0004765!2.02e-20!101;UBERON:0001434!2.02e-20!101;UBERON:0002384!4.94e-10!375;UBERON:0000178!2.00e-09!15;UBERON:0000179!2.00e-09!15;UBERON:0000463!2.00e-09!15;UBERON:0003081!2.93e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.47e-10;15!UBERON:0000179;9.47e-10;15!UBERON:0000463;9.47e-10;15!UBERON:0007023;7.98e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-49,98;UBERON:0003061,1.26e-49,98;UBERON:0002193,1.26e-43,108;UBERON:0002371,7.55e-37,76;UBERON:0002405,1.48e-34,93;UBERON:0001474,9.71e-32,82;UBERON:0004765,4.26e-26,90;UBERON:0007023,2.69e-24,114;UBERON:0001434,1.31e-21,100;UBERON:0003081,6.36e-12,203;UBERON:0002384,7.15e-12,371;UBERON:0000178,9.44e-10,15;UBERON:0000179,9.44e-10,15;UBERON:0000463,9.44e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4295274896802,0,0,0,0,0,0,0,0,0,175.063112568556,149.505173388351,162.38034185012,468.496853727045,333.931576344575,208.227685860122,0,0,0,95.7494599172528,94.2582011391605,206.107508413063,306.91345632666,400.888350492813,240.231033882448,366.773546804996,382.842313234434,334.590662356808,701.982696827738,716.074913290294,623.683621313875,916.932550592926,858.518550189572,1006.23599903819,1920.05902635803,1622.00959374227,2149.15050522746,1002.17569390135,853.976236381402,961.528054819826,802.288851130581,966.63358350489,1083.39191850975,1347.38129421671,1391.54826140194,1232.00264141475,1399.88891799242,1387.26973875845,1365.19787595622,1467.58811974475,1260.72996926371,1542.10788851304,1543.16930200692,1385.58011424248,1850.23176804289,1353.67328788821,1638.46720250868,1822.19042688461,733.055843502438,660.13635139146,733.17628334279,588.826684469927,633.295957112632,547.270622703558,707.116617222038,725.051288390683,695.950425843255,535.028583162421,478.417423465627,454.539228724276,463.429021707227,461.656573052522,410.947994567456,466.697680186113,417.875544486489,162.794909165302,169.711547728201,165.142034550099,145.388461436928,182.165282968999,129.058201539788,119.992959769438,160.741401964408,192.237401564541,610.230708175975,381.329051961301,414.740277823626,403.291327804376,666.123121716453,594.809327191696,612.098150734545,687.571010099375,562.192802275988,598.793236165679,358.803507845221,442.712728492929,482.811940834597,384.655344842385,374.824700153688,353.330070460822,527.228371571775,429.206952834152,461.148031837689,517.678289871903,440.89453342455,487.010423484601,475.226022224187,430.042540086119,408.405276193749,502.22152074043,471.423508819638,438.482350355839,181.244462159034,201.649907620765,136.279764053714,0,0,0,0,0,0,0,0,0,0,1.49319135678314,27.9640326187616,0,0,519.275829847493,524.130509270794,444.744377935604,259.000817995601,321.461139858432,228.817820819012,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,1429.81752918129,1764.40020187488,0,0,0,0,0,6.73869926176878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,1.07865046528132,0,0,0,0,0,0,2.53510069643662,24.5706804169407,20.0868568271677,61.3633708186364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,398.132898843321,467.540521748197,328.920762144956,0,0,0,0,0,0,217.757151150007,190.977053374687,90.3950583757766,88.0572915377634,84.4561879622482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,496.225025016057,466.596837940445,516.543151733428,0,0,0,0,0,0,135.959279664149,223.629912829187,221.880774530443,185.199001351677,0.508189248444927,0,0.773288812777695,10.553524716064,0,1276.307968806,1373.15109774647,1734.74333924324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,332.896522057849,374.911281022756,232.559348453705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.883010501737,16.4704334145687,0,0,0,111.28429257954,0,0,0,0,0,0,0,0,0,0,0,4.00565148855674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7027634220898,0,0,0,0,0,1.68886108238131,0,0,0,0,6.03272047982209,0,111.93697912359,0,0,0,0,509.98484727833,425.138287171161,526.9236481361,450.972750941595,603.057092344361,485.058036772153,446.605998595921,537.738869527515,0,0,0,116.498590803826,100.699910657559,14.0149431396376,69.3504286370377,99.7896857164083,222.52924009381,88.0562104131353,54.8611079063999,39.0308077577708,83.9903618842147,8.93075405906233,67.6713088143181,50.1103662292746,123.813405904952,100.496254181142,53.6566259489811,70.4185956749318,25.1937426732936,29.3015701339065,31.7013369252626,21.1019143034204,0,1.23087398947712,22.7182769919826,1.33228787199128,31.0171411193269,0,113.397330756446,0,270.807423794272,0,2.14870036263921,5.04839957415486,0.614321404198464,19.882952955326,24.3358090390187,0,50.9243971360687,0,23.3120146253752,165.217781487626,0,0,152.255904355343,0,0,0,74.1779936828964,35.8075562462069,361.619469443879,0,14.5399911914283,23.0064883441391,3.99227596002388,0,0,27.5499838665222,0,0,0,0.344743373241465,0,0,14.1718621730214,19.7778159345669,1.52581736317083,3.42795705786796,5.91095237907095,11.1886552548526,0,0,15.2361511837518,0,0.69169171316418,0.359030577639089,3.15077378573823,11.4840417503491,5.03786763710243,37.3124343213044,150.224148347733,80.5308715306477,55.0160667089518,12.6333569945621,9.99918925020472,15.9430507627051,7.40039557624322,73.9055092258761,0,0,0,0,13.9336670350991,37.7713800429258,25.6632660872123,76.2059300709198,132.089850733812,133.346829518467,23.8600010751597,11.236087062183,22.2551223439072,43.6066946225442,0,0,4.3404284313433,20.5684217282729,3.0607276163049,70.3266631265071,1.05226393590145,0,0,0,0,0,0,0.138674673013139,0,0,0,24.2870068856422,0,0.0967563312890851,0,0,21.2405946109639,0,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| |||
|short_description=p1@CD53 | |||
}} |
Revision as of 23:29, 11 September 2013
Short description: | p1@CD53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CD53_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000271324, ENST00000429072, ENST00000468160, uc001dzy.2, uc010owa.1_5end |
EntrezGene: | CD53 |
HGNC: | 1686 |
UniProt: | P19397B4DQB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.26e-49 | 98 |
blood island | 1.26e-49 | 98 |
hemolymphoid system | 1.26e-43 | 108 |
bone marrow | 7.55e-37 | 76 |
immune system | 1.48e-34 | 93 |
bone element | 9.71e-32 | 82 |
skeletal element | 4.26e-26 | 90 |
adult organism | 2.69e-24 | 114 |
skeletal system | 1.31e-21 | 100 |
lateral plate mesoderm | 6.36e-12 | 203 |
connective tissue | 7.15e-12 | 371 |
blood | 9.44e-10 | 15 |
haemolymphatic fluid | 9.44e-10 | 15 |
organism substance | 9.44e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.62e-13 | 51 |
immune system cancer | 4.62e-13 | 51 |
leukemia | 9.04e-11 | 39 |
myeloid leukemia | 5.06e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.