FFCP PHASE1:Hg19::chr11:109995554..109995558,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr11:109995554..109995558,+|id=chr11:109995554..109995558,+|ontology_enrichment_celltype=CL:0002057!1.79e-20!42;CL:0000860!3.32e-20!45;CL:0002009!6.26e-20!65;CL:0002194!8.34e-20!63;CL:0000576!8.34e-20!63;CL:0000040!8.34e-20!63;CL:0000559!8.34e-20!63;CL:0000557!8.65e-18!71;CL:0000839!3.80e-17!70;CL:0000766!2.61e-16!76;CL:0000763!2.29e-15!112;CL:0000049!2.29e-15!112;CL:0002087!4.91e-10!119;CL:0000037!1.10e-09!172;CL:0000566!1.10e-09!172;CL:0000738!1.33e-09!140;CL:0002032!1.78e-09!165;CL:0000837!1.78e-09!165;CL:0002031!3.58e-09!124;CL:0000988!1.41e-08!182|ontology_enrichment_celltype_v019=CL:0000860;9.59e-73;33!CL:0002057;9.59e-73;33!CL:0000473;1.34e-56;39!CL:0000234;1.34e-56;39!CL:0000576;2.51e-42;48!CL:0000766;3.60e-29;69!CL:0002087;2.73e-13;104!CL:0000763;7.13e-13;100!CL:0000738;2.94e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,2.24e-74,42;CL:0002057,2.24e-74,42;CL:0000473,3.36e-71,48;CL:0000234,3.36e-71,48;CL:0002194,1.46e-61,59;CL:0000576,1.46e-61,59;CL:0000040,1.46e-61,59;CL:0000559,1.46e-61,59;CL:0002009,1.87e-59,61;CL:0000839,9.84e-55,66;CL:0000557,7.14e-54,67;CL:0000766,6.39e-50,72;CL:0000763,3.75e-32,108;CL:0000049,3.75e-32,108;CL:0002087,5.65e-30,115;CL:0002031,1.42e-28,120;CL:0000738,9.00e-25,136;CL:0002032,2.49e-20,161;CL:0000837,2.49e-20,161;CL:0000037,2.54e-19,168;CL:0000988,3.86e-18,177;CL:0000134,5.14e-07,354;CL:0002320,8.50e-07,361|ontology_enrichment_development_v019=CL:0002057;1.08e-56;42!UBERON:0005425;1.32e-08;1!CL:0000049;9.08e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.44e-15!80;UBERON:0001474!8.33e-15!86;UBERON:0004765!1.29e-13!101;UBERON:0001434!1.29e-13!101;UBERON:0002390!3.33e-10!102;UBERON:0003061!3.33e-10!102;UBERON:0002405!5.00e-10!115;UBERON:0002193!1.50e-08!112;UBERON:0002204!5.95e-08!167|ontology_enrichment_uberon_v019=UBERON:0000941;1.32e-08;1!UBERON:0001785;1.32e-08;1!UBERON:0002464;1.32e-08;1!UBERON:0004904;1.32e-08;1!UBERON:0001021;1.32e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-47,76;UBERON:0001474,1.92e-43,82;UBERON:0004765,2.77e-39,90;UBERON:0002405,6.61e-38,93;UBERON:0002390,8.54e-36,98;UBERON:0003061,8.54e-36,98;UBERON:0001434,5.22e-35,100;UBERON:0002193,3.75e-32,108;UBERON:0002204,1.85e-19,167;UBERON:0003081,2.62e-15,203;UBERON:0000926,2.00e-09,315;UBERON:0004120,2.00e-09,315;UBERON:0006603,2.00e-09,315;UBERON:0000941,1.22e-08,1;UBERON:0001785,1.22e-08,1;UBERON:0002464,1.22e-08,1;UBERON:0004904,1.22e-08,1;UBERON:0001021,1.22e-08,1;UBERON:0003902,1.22e-08,1;UBERON:0005425,1.22e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0.305653622991805,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0.142169232487422,0,2.21598163412751,1.40381113229099,0.868043482863407,1.11957737119962,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,3.0215774797739,4.11167888021826,2.47765096716083,1.1507695692886,1.5369642391746,0.709446689665756,6.20542225325913,1.93645405075148,4.06279459783025,1.69418105588344,1.09162460023138,0.898893937780338,2.75475503133812,0.320929027076094,4.47535988059329,0,0.199463657621632,0,5.22376629531451,1.13477044938228,1.86846674698672,0.75374599577023,0.521482918420201,1.08594422352558,1.81619850790011,1.47311054395026,2.84816148696796,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0.443458794925128,0,0,0,0,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.485618833104395,0.702254033511242,0.204154171254893,0.245668634623536,0,0,0,0,0,0.673344455816265,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2060820232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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:109995554..109995558,+ | |||
|id=chr11:109995554..109995558,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.79e-20!42;CL:0000860!3.32e-20!45;CL:0002009!6.26e-20!65;CL:0002194!8.34e-20!63;CL:0000576!8.34e-20!63;CL:0000040!8.34e-20!63;CL:0000559!8.34e-20!63;CL:0000557!8.65e-18!71;CL:0000839!3.80e-17!70;CL:0000766!2.61e-16!76;CL:0000763!2.29e-15!112;CL:0000049!2.29e-15!112;CL:0002087!4.91e-10!119;CL:0000037!1.10e-09!172;CL:0000566!1.10e-09!172;CL:0000738!1.33e-09!140;CL:0002032!1.78e-09!165;CL:0000837!1.78e-09!165;CL:0002031!3.58e-09!124;CL:0000988!1.41e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.59e-73;33!CL:0002057;9.59e-73;33!CL:0000473;1.34e-56;39!CL:0000234;1.34e-56;39!CL:0000576;2.51e-42;48!CL:0000766;3.60e-29;69!CL:0002087;2.73e-13;104!CL:0000763;7.13e-13;100!CL:0000738;2.94e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.24e-74,42;CL:0002057,2.24e-74,42;CL:0000473,3.36e-71,48;CL:0000234,3.36e-71,48;CL:0002194,1.46e-61,59;CL:0000576,1.46e-61,59;CL:0000040,1.46e-61,59;CL:0000559,1.46e-61,59;CL:0002009,1.87e-59,61;CL:0000839,9.84e-55,66;CL:0000557,7.14e-54,67;CL:0000766,6.39e-50,72;CL:0000763,3.75e-32,108;CL:0000049,3.75e-32,108;CL:0002087,5.65e-30,115;CL:0002031,1.42e-28,120;CL:0000738,9.00e-25,136;CL:0002032,2.49e-20,161;CL:0000837,2.49e-20,161;CL:0000037,2.54e-19,168;CL:0000988,3.86e-18,177;CL:0000134,5.14e-07,354;CL:0002320,8.50e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-56;42!UBERON:0005425;1.32e-08;1!CL:0000049;9.08e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.44e-15!80;UBERON:0001474!8.33e-15!86;UBERON:0004765!1.29e-13!101;UBERON:0001434!1.29e-13!101;UBERON:0002390!3.33e-10!102;UBERON:0003061!3.33e-10!102;UBERON:0002405!5.00e-10!115;UBERON:0002193!1.50e-08!112;UBERON:0002204!5.95e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.32e-08;1!UBERON:0001785;1.32e-08;1!UBERON:0002464;1.32e-08;1!UBERON:0004904;1.32e-08;1!UBERON:0001021;1.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-47,76;UBERON:0001474,1.92e-43,82;UBERON:0004765,2.77e-39,90;UBERON:0002405,6.61e-38,93;UBERON:0002390,8.54e-36,98;UBERON:0003061,8.54e-36,98;UBERON:0001434,5.22e-35,100;UBERON:0002193,3.75e-32,108;UBERON:0002204,1.85e-19,167;UBERON:0003081,2.62e-15,203;UBERON:0000926,2.00e-09,315;UBERON:0004120,2.00e-09,315;UBERON:0006603,2.00e-09,315;UBERON:0000941,1.22e-08,1;UBERON:0001785,1.22e-08,1;UBERON:0002464,1.22e-08,1;UBERON:0004904,1.22e-08,1;UBERON:0001021,1.22e-08,1;UBERON:0003902,1.22e-08,1;UBERON:0005425,1.22e-08,1 | |||
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| |||
|short_description=p@chr11:109995554..109995558,+ | |||
}} |
Revision as of 15:37, 10 September 2013
Short description: | p@chr11:109995554..109995558, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:109995554..109995558, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.24e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.24e-74 | 42 |
defensive cell | 3.36e-71 | 48 |
phagocyte | 3.36e-71 | 48 |
monopoietic cell | 1.46e-61 | 59 |
monocyte | 1.46e-61 | 59 |
monoblast | 1.46e-61 | 59 |
promonocyte | 1.46e-61 | 59 |
macrophage dendritic cell progenitor | 1.87e-59 | 61 |
myeloid lineage restricted progenitor cell | 9.84e-55 | 66 |
granulocyte monocyte progenitor cell | 7.14e-54 | 67 |
myeloid leukocyte | 6.39e-50 | 72 |
myeloid cell | 3.75e-32 | 108 |
common myeloid progenitor | 3.75e-32 | 108 |
nongranular leukocyte | 5.65e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.42e-28 | 120 |
leukocyte | 9.00e-25 | 136 |
hematopoietic oligopotent progenitor cell | 2.49e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-20 | 161 |
hematopoietic stem cell | 2.54e-19 | 168 |
hematopoietic cell | 3.86e-18 | 177 |
mesenchymal cell | 5.14e-07 | 354 |
connective tissue cell | 8.50e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-47 | 76 |
bone element | 1.92e-43 | 82 |
skeletal element | 2.77e-39 | 90 |
immune system | 6.61e-38 | 93 |
hematopoietic system | 8.54e-36 | 98 |
blood island | 8.54e-36 | 98 |
skeletal system | 5.22e-35 | 100 |
hemolymphoid system | 3.75e-32 | 108 |
musculoskeletal system | 1.85e-19 | 167 |
lateral plate mesoderm | 2.62e-15 | 203 |
mesoderm | 2.00e-09 | 315 |
mesoderm-derived structure | 2.00e-09 | 315 |
presumptive mesoderm | 2.00e-09 | 315 |
cranial nerve II | 1.22e-08 | 1 |
cranial nerve | 1.22e-08 | 1 |
nerve trunk | 1.22e-08 | 1 |
nerve connecting eye with brain | 1.22e-08 | 1 |
nerve | 1.22e-08 | 1 |
retinal neural layer | 1.22e-08 | 1 |
presumptive neural retina | 1.22e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.