FFCP PHASE1:Hg19::chr12:25029191..25029196,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:25029191..25029196,-|id=chr12:25029191..25029196,-|ontology_enrichment_celltype=CL:0002057!2.48e-17!42;CL:0000860!3.68e-15!45;CL:0002009!2.10e-11!65;CL:0002194!2.84e-11!63;CL:0000576!2.84e-11!63;CL:0000040!2.84e-11!63;CL:0000559!2.84e-11!63;CL:0000557!9.25e-10!71;CL:0000839!2.86e-09!70;CL:0000763!1.55e-08!112;CL:0000049!1.55e-08!112;CL:0000766!6.73e-08!76|ontology_enrichment_celltype_v019=CL:0000860;3.29e-35;33!CL:0002057;3.29e-35;33!CL:0000473;2.72e-28;39!CL:0000234;2.72e-28;39!CL:0000576;6.51e-15;48!CL:0000766;5.05e-10;69!CL:0000039;2.21e-08;7!CL:0000586;2.21e-08;7!CL:0000511;3.84e-07;1!CL:0002625;3.84e-07;1!CL:0002174;3.84e-07;1!CL:0000216;3.84e-07;1!CL:0000501;3.84e-07;1|ontology_enrichment_celltype_v019_2=CL:0000860,7.61e-29,42;CL:0002057,7.61e-29,42;CL:0000473,2.01e-28,48;CL:0000234,2.01e-28,48;CL:0002194,4.59e-22,59;CL:0000576,4.59e-22,59;CL:0000040,4.59e-22,59;CL:0000559,4.59e-22,59;CL:0002009,3.04e-21,61;CL:0000839,2.08e-19,66;CL:0000557,4.50e-19,67;CL:0000766,1.55e-17,72;CL:0000763,3.25e-12,108;CL:0000049,3.25e-12,108;CL:0002087,8.28e-10,115;CL:0002031,2.87e-09,120;CL:0000039,1.68e-08,7;CL:0000586,1.68e-08,7;CL:0000738,8.23e-08,136;CL:0002174,2.37e-07,1;CL:0000501,2.37e-07,1;CL:0000511,2.84e-07,1;CL:0002625,2.84e-07,1;CL:0000216,2.84e-07,1;CL:0002032,4.37e-07,161;CL:0000837,4.37e-07,161;CL:0000988,4.71e-07,177|ontology_enrichment_development_v019=CL:0002057;1.81e-21;42|ontology_enrichment_disease=DOID:162!3.38e-09!235;DOID:14566!9.33e-09!239;DOID:3095!2.73e-08!22;DOID:2994!2.73e-08!22|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.66e-08!80;UBERON:0001474!4.82e-08!86|ontology_enrichment_uberon_v019=UBERON:0000473;3.01e-12;8!UBERON:0003135;6.16e-09;11!UBERON:0005795;3.84e-07;1!UBERON:0001136;3.84e-07;1!UBERON:0001343;3.84e-07;1!UBERON:0004910;3.84e-07;1!UBERON:0004813;3.84e-07;1!UBERON:0000991;6.43e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-16,76;UBERON:0001474,5.08e-15,82;UBERON:0002390,9.31e-14,98;UBERON:0003061,9.31e-14,98;UBERON:0004765,2.09e-13,90;UBERON:0002405,7.13e-13,93;UBERON:0000473,1.89e-12,8;UBERON:0002193,3.60e-12,108;UBERON:0001434,9.43e-12,100;UBERON:0003135,4.41e-09,11;UBERON:0001136,2.84e-07,1;UBERON:0001343,2.84e-07,1;UBERON:0004910,2.84e-07,1;UBERON:0005154,2.84e-07,1;UBERON:0005295,2.84e-07,1;UBERON:0004813,2.84e-07,1;UBERON:0005297,2.84e-07,1;UBERON:0005294,2.84e-07,1;UBERON:0010141,2.84e-07,1;UBERON:0005891,2.84e-07,1;UBERON:0000991,5.29e-07,21;UBERON:0009196,5.29e-07,21;UBERON:0009117,5.29e-07,21;UBERON:0005564,5.29e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0,0,0,0,0.154816123316076,0,0,0,0.619737604642413,0.995184627411951,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0.290796477559129,1.13362783106643,0.970336244751265,1.62700325833979,3.70051099219643,3.71647645074124,0.863077176966451,1.0246428261164,0.47296445977717,0.689491361473237,2.5819387343353,5.41705946377367,0.941211697713023,1.09162460023138,0.674170453335254,1.53041946185451,0.641858054152187,2.55734850319616,0,1.79517291859469,0.852449501065388,0.870627715885752,0.56738522469114,1.86846674698672,3.01498398308092,5.21482918420201,0.434377689410233,0,1.10483290796269,0.949387162322653,0.211255286311942,0,0,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.488124115096339,0,0.81014194788176,0.267899184852239,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0,0,1.06748995729705,0,0,0.67355336034844,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0.485618833104395,0.280901613404497,0.204154171254893,0.368502951935304,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.397589304964456,0.116193942869518,0,0,0.72995471815166,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.570762456703795,0,0,1.47730203652438,0.468008530278475,0.743155811443641,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.4483405759741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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:25029191..25029196,- | |||
|id=chr12:25029191..25029196,- | |||
|ontology_enrichment_celltype=CL:0002057!2.48e-17!42;CL:0000860!3.68e-15!45;CL:0002009!2.10e-11!65;CL:0002194!2.84e-11!63;CL:0000576!2.84e-11!63;CL:0000040!2.84e-11!63;CL:0000559!2.84e-11!63;CL:0000557!9.25e-10!71;CL:0000839!2.86e-09!70;CL:0000763!1.55e-08!112;CL:0000049!1.55e-08!112;CL:0000766!6.73e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.29e-35;33!CL:0002057;3.29e-35;33!CL:0000473;2.72e-28;39!CL:0000234;2.72e-28;39!CL:0000576;6.51e-15;48!CL:0000766;5.05e-10;69!CL:0000039;2.21e-08;7!CL:0000586;2.21e-08;7!CL:0000511;3.84e-07;1!CL:0002625;3.84e-07;1!CL:0002174;3.84e-07;1!CL:0000216;3.84e-07;1!CL:0000501;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.61e-29,42;CL:0002057,7.61e-29,42;CL:0000473,2.01e-28,48;CL:0000234,2.01e-28,48;CL:0002194,4.59e-22,59;CL:0000576,4.59e-22,59;CL:0000040,4.59e-22,59;CL:0000559,4.59e-22,59;CL:0002009,3.04e-21,61;CL:0000839,2.08e-19,66;CL:0000557,4.50e-19,67;CL:0000766,1.55e-17,72;CL:0000763,3.25e-12,108;CL:0000049,3.25e-12,108;CL:0002087,8.28e-10,115;CL:0002031,2.87e-09,120;CL:0000039,1.68e-08,7;CL:0000586,1.68e-08,7;CL:0000738,8.23e-08,136;CL:0002174,2.37e-07,1;CL:0000501,2.37e-07,1;CL:0000511,2.84e-07,1;CL:0002625,2.84e-07,1;CL:0000216,2.84e-07,1;CL:0002032,4.37e-07,161;CL:0000837,4.37e-07,161;CL:0000988,4.71e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-21;42 | |||
|ontology_enrichment_disease=DOID:162!3.38e-09!235;DOID:14566!9.33e-09!239;DOID:3095!2.73e-08!22;DOID:2994!2.73e-08!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.66e-08!80;UBERON:0001474!4.82e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.01e-12;8!UBERON:0003135;6.16e-09;11!UBERON:0005795;3.84e-07;1!UBERON:0001136;3.84e-07;1!UBERON:0001343;3.84e-07;1!UBERON:0004910;3.84e-07;1!UBERON:0004813;3.84e-07;1!UBERON:0000991;6.43e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-16,76;UBERON:0001474,5.08e-15,82;UBERON:0002390,9.31e-14,98;UBERON:0003061,9.31e-14,98;UBERON:0004765,2.09e-13,90;UBERON:0002405,7.13e-13,93;UBERON:0000473,1.89e-12,8;UBERON:0002193,3.60e-12,108;UBERON:0001434,9.43e-12,100;UBERON:0003135,4.41e-09,11;UBERON:0001136,2.84e-07,1;UBERON:0001343,2.84e-07,1;UBERON:0004910,2.84e-07,1;UBERON:0005154,2.84e-07,1;UBERON:0005295,2.84e-07,1;UBERON:0004813,2.84e-07,1;UBERON:0005297,2.84e-07,1;UBERON:0005294,2.84e-07,1;UBERON:0010141,2.84e-07,1;UBERON:0005891,2.84e-07,1;UBERON:0000991,5.29e-07,21;UBERON:0009196,5.29e-07,21;UBERON:0009117,5.29e-07,21;UBERON:0005564,5.29e-07,21 | |||
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| |||
|short_description=p@chr12:25029191..25029196,- | |||
}} |
Revision as of 22:14, 10 September 2013
Short description: | p@chr12:25029191..25029196, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:25029191..25029196, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.61e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.61e-29 | 42 |
defensive cell | 2.01e-28 | 48 |
phagocyte | 2.01e-28 | 48 |
monopoietic cell | 4.59e-22 | 59 |
monocyte | 4.59e-22 | 59 |
monoblast | 4.59e-22 | 59 |
promonocyte | 4.59e-22 | 59 |
macrophage dendritic cell progenitor | 3.04e-21 | 61 |
myeloid lineage restricted progenitor cell | 2.08e-19 | 66 |
granulocyte monocyte progenitor cell | 4.50e-19 | 67 |
myeloid leukocyte | 1.55e-17 | 72 |
myeloid cell | 3.25e-12 | 108 |
common myeloid progenitor | 3.25e-12 | 108 |
nongranular leukocyte | 8.28e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.87e-09 | 120 |
germ line cell | 1.68e-08 | 7 |
germ cell | 1.68e-08 | 7 |
leukocyte | 8.23e-08 | 136 |
follicular cell of ovary | 2.37e-07 | 1 |
granulosa cell | 2.37e-07 | 1 |
androgen binding protein secreting cell | 2.84e-07 | 1 |
seminiferous tubule epithelial cell | 2.84e-07 | 1 |
Sertoli cell | 2.84e-07 | 1 |
hematopoietic oligopotent progenitor cell | 4.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.37e-07 | 161 |
hematopoietic cell | 4.71e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.88e-16 | 76 |
bone element | 5.08e-15 | 82 |
hematopoietic system | 9.31e-14 | 98 |
blood island | 9.31e-14 | 98 |
skeletal element | 2.09e-13 | 90 |
immune system | 7.13e-13 | 93 |
testis | 1.89e-12 | 8 |
hemolymphoid system | 3.60e-12 | 108 |
skeletal system | 9.43e-12 | 100 |
male reproductive organ | 4.41e-09 | 11 |
mesothelium | 2.84e-07 | 1 |
seminiferous tubule of testis | 2.84e-07 | 1 |
epithelium of male gonad | 2.84e-07 | 1 |
epithelial cord | 2.84e-07 | 1 |
sex cord | 2.84e-07 | 1 |
seminiferous tubule epithelium | 2.84e-07 | 1 |
testis sex cord | 2.84e-07 | 1 |
genital ridge | 2.84e-07 | 1 |
primitive sex cord of indifferent gonad | 2.84e-07 | 1 |
coelomic epithelium | 2.84e-07 | 1 |
gonad | 5.29e-07 | 21 |
indifferent external genitalia | 5.29e-07 | 21 |
indifferent gonad | 5.29e-07 | 21 |
gonad primordium | 5.29e-07 | 21 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.