FFCP PHASE1:Hg19::chr13:46733057..46733091,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3936|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=6528|TSSclassifier=S|UniProt=P13796|association_with_transcript=-40bp_to_M22300_5end|coexpression_cluster_id=C13|description=CAGE_peak_9_at_LCP1_5end|id=chr13:46733057..46733091,-|ontology_enrichment_celltype=CL:0000037!3.51e-83!172;CL:0000566!3.51e-83!172;CL:0000988!8.69e-80!182;CL:0002032!9.70e-78!165;CL:0000837!9.70e-78!165;CL:0000738!1.21e-76!140;CL:0002087!3.13e-62!119;CL:0002031!6.06e-59!124;CL:0000763!9.85e-54!112;CL:0000049!9.85e-54!112;CL:0000766!2.82e-45!76;CL:0002009!3.83e-41!65;CL:0002194!2.52e-39!63;CL:0000576!2.52e-39!63;CL:0000040!2.52e-39!63;CL:0000559!2.52e-39!63;CL:0000557!2.82e-39!71;CL:0000839!1.30e-36!70;CL:0002057!1.98e-35!42;CL:0000860!7.84e-32!45;CL:0000542!1.04e-19!53;CL:0000051!1.04e-19!53;CL:0000134!2.92e-19!358;CL:0000838!5.55e-19!52;CL:0002320!5.14e-18!365;CL:0000219!2.18e-15!390;CL:0000084!1.12e-11!25;CL:0000827!1.12e-11!25;CL:0000451!4.26e-10!10;CL:0000034!1.06e-09!444;CL:0000048!2.75e-09!430;CL:0000990!3.87e-09!8;CL:0000723!6.53e-09!436;CL:0000094!4.46e-08!8;CL:0000791!6.41e-08!18;CL:0000789!6.41e-08!18;CL:0002420!6.41e-08!18;CL:0002419!6.41e-08!18;CL:0000790!6.41e-08!18;CL:0002393!7.74e-08!9;CL:0002397!7.74e-08!9;CL:0000945!3.23e-07!24;CL:0000826!3.23e-07!24|ontology_enrichment_celltype_v019=CL:0000860;1.24e-40;33!CL:0002057;1.24e-40;33!CL:0000473;3.44e-38;39!CL:0000234;3.44e-38;39!CL:0000576;1.91e-29;48!CL:0000766;4.55e-25;69!CL:0000738;2.31e-18;136!CL:0000763;1.36e-17;100!CL:0002087;2.15e-17;104!CL:0000988;3.75e-14;177!CL:0000990;7.24e-14;8!CL:0000451;2.71e-13;10!CL:0000094;3.84e-10;8!CL:0000840;2.72e-09;5!CL:0000453;5.51e-09;5!CL:0000219;2.53e-08;193!CL:0000235;2.92e-07;6!CL:0000081;5.40e-07;11!CL:0000775;6.96e-07;3|ontology_enrichment_celltype_v019_2=CL:0000037,9.53e-81,168;CL:0000738,7.98e-78,136;CL:0002032,1.46e-77,161;CL:0000837,1.46e-77,161;CL:0000988,6.51e-77,177;CL:0000763,2.51e-66,108;CL:0000049,2.51e-66,108;CL:0002087,2.87e-63,115;CL:0000766,1.17e-59,72;CL:0000473,1.82e-59,48;CL:0000234,1.82e-59,48;CL:0002009,3.71e-59,61;CL:0002031,4.28e-58,120;CL:0002194,3.41e-56,59;CL:0000576,3.41e-56,59;CL:0000040,3.41e-56,59;CL:0000559,3.41e-56,59;CL:0000860,1.84e-53,42;CL:0002057,1.84e-53,42;CL:0000557,2.13e-52,67;CL:0000839,1.43e-48,66;CL:0000134,3.06e-24,354;CL:0002320,3.11e-23,361;CL:0000219,1.07e-19,386;CL:0000048,2.01e-15,427;CL:0000723,7.74e-15,433;CL:0000034,1.25e-14,441;CL:0000990,4.25e-14,8;CL:0000451,1.32e-13,10;CL:0000542,2.72e-11,53;CL:0000051,2.72e-11,53;CL:0000838,1.77e-10,52;CL:0000094,4.44e-10,8;CL:0002393,6.92e-10,9;CL:0002397,6.92e-10,9;CL:0000840,1.58e-09,5;CL:0001029,1.58e-09,5;CL:0000453,4.16e-09,5;CL:0000235,2.83e-07,6;CL:0000081,5.96e-07,11;CL:0000775,6.95e-07,3|ontology_enrichment_development_v019=CL:0002057;1.57e-38;42!CL:0000049;6.55e-18;108|ontology_enrichment_disease=DOID:2531!1.13e-16!51;DOID:0060083!1.13e-16!51;DOID:1240!4.93e-11!39;DOID:8692!6.60e-08!31;DOID:0060058!1.23e-07!10|ontology_enrichment_disease_v019=DOID:2531;2.94e-07;51!DOID:0060083;2.94e-07;51|ontology_enrichment_disease_v019_2=DOID:2531,9.65e-12,51;DOID:0060083,9.65e-12,51;DOID:1240,4.54e-07,39|ontology_enrichment_uberon=UBERON:0002390!2.96e-49!102;UBERON:0003061!2.96e-49!102;UBERON:0002193!2.99e-45!112;UBERON:0002371!1.08e-34!80;UBERON:0001474!1.62e-30!86;UBERON:0002405!1.59e-26!115;UBERON:0004765!2.13e-22!101;UBERON:0001434!2.13e-22!101;UBERON:0002384!2.67e-17!375;UBERON:0000178!1.95e-11!15;UBERON:0000179!1.95e-11!15;UBERON:0000463!1.95e-11!15;UBERON:0003081!1.58e-10!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-10;15!UBERON:0000179;1.75e-10;15!UBERON:0000463;1.75e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.94e-56,98;UBERON:0003061,1.94e-56,98;UBERON:0002193,4.83e-51,108;UBERON:0002371,3.63e-46,76;UBERON:0001474,1.41e-41,82;UBERON:0002405,5.57e-41,93;UBERON:0004765,2.05e-36,90;UBERON:0001434,3.85e-31,100;UBERON:0002384,7.33e-22,371;UBERON:0003081,7.06e-18,203;UBERON:0002204,1.54e-12,167;UBERON:0000178,1.84e-10,15;UBERON:0000179,1.84e-10,15;UBERON:0000463,1.84e-10,15|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.34231267707995,3.53032534634767,2.44003422072406,1.18009283054671,1.15148819429164,0.619264493264304,0,0,0,0.774672005803016,1.13735385989937,0.587200878669695,0.553995408531877,3.00816671205213,1.95309783644267,0.223915474239924,0.32389366601898,1.03030227053675,3.78035420826868,3.02300754951048,0.727752183563449,6.27558399645349,9.04569353648017,4.33588919253145,6.32923263108731,5.37937483711111,3.07426898855161,5.17118521104928,4.51839278508678,0,5.64727018627814,4.91231070104122,1.57306439111559,5.81559395504715,2.56743221660875,7.67204550958849,4.61791820261403,3.98927315243264,2.13112375266347,15.6712988859435,5.10646702222026,6.22822248995575,5.02497330513487,6.77927793946262,2.17188844705117,14.5295880632009,4.41933163185078,7.27863491114034,4.64761629886272,1.70083439972035,2.09658645508376,1.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6528 | |||
|TSSclassifier=S | |||
|UniProt=P13796 | |||
|association_with_transcript=-40bp_to_M22300_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_9_at_LCP1_5end | |||
|id=chr13:46733057..46733091,- | |||
|ontology_enrichment_celltype=CL:0000037!3.51e-83!172;CL:0000566!3.51e-83!172;CL:0000988!8.69e-80!182;CL:0002032!9.70e-78!165;CL:0000837!9.70e-78!165;CL:0000738!1.21e-76!140;CL:0002087!3.13e-62!119;CL:0002031!6.06e-59!124;CL:0000763!9.85e-54!112;CL:0000049!9.85e-54!112;CL:0000766!2.82e-45!76;CL:0002009!3.83e-41!65;CL:0002194!2.52e-39!63;CL:0000576!2.52e-39!63;CL:0000040!2.52e-39!63;CL:0000559!2.52e-39!63;CL:0000557!2.82e-39!71;CL:0000839!1.30e-36!70;CL:0002057!1.98e-35!42;CL:0000860!7.84e-32!45;CL:0000542!1.04e-19!53;CL:0000051!1.04e-19!53;CL:0000134!2.92e-19!358;CL:0000838!5.55e-19!52;CL:0002320!5.14e-18!365;CL:0000219!2.18e-15!390;CL:0000084!1.12e-11!25;CL:0000827!1.12e-11!25;CL:0000451!4.26e-10!10;CL:0000034!1.06e-09!444;CL:0000048!2.75e-09!430;CL:0000990!3.87e-09!8;CL:0000723!6.53e-09!436;CL:0000094!4.46e-08!8;CL:0000791!6.41e-08!18;CL:0000789!6.41e-08!18;CL:0002420!6.41e-08!18;CL:0002419!6.41e-08!18;CL:0000790!6.41e-08!18;CL:0002393!7.74e-08!9;CL:0002397!7.74e-08!9;CL:0000945!3.23e-07!24;CL:0000826!3.23e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-40;33!CL:0002057;1.24e-40;33!CL:0000473;3.44e-38;39!CL:0000234;3.44e-38;39!CL:0000576;1.91e-29;48!CL:0000766;4.55e-25;69!CL:0000738;2.31e-18;136!CL:0000763;1.36e-17;100!CL:0002087;2.15e-17;104!CL:0000988;3.75e-14;177!CL:0000990;7.24e-14;8!CL:0000451;2.71e-13;10!CL:0000094;3.84e-10;8!CL:0000840;2.72e-09;5!CL:0000453;5.51e-09;5!CL:0000219;2.53e-08;193!CL:0000235;2.92e-07;6!CL:0000081;5.40e-07;11!CL:0000775;6.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.53e-81,168;CL:0000738,7.98e-78,136;CL:0002032,1.46e-77,161;CL:0000837,1.46e-77,161;CL:0000988,6.51e-77,177;CL:0000763,2.51e-66,108;CL:0000049,2.51e-66,108;CL:0002087,2.87e-63,115;CL:0000766,1.17e-59,72;CL:0000473,1.82e-59,48;CL:0000234,1.82e-59,48;CL:0002009,3.71e-59,61;CL:0002031,4.28e-58,120;CL:0002194,3.41e-56,59;CL:0000576,3.41e-56,59;CL:0000040,3.41e-56,59;CL:0000559,3.41e-56,59;CL:0000860,1.84e-53,42;CL:0002057,1.84e-53,42;CL:0000557,2.13e-52,67;CL:0000839,1.43e-48,66;CL:0000134,3.06e-24,354;CL:0002320,3.11e-23,361;CL:0000219,1.07e-19,386;CL:0000048,2.01e-15,427;CL:0000723,7.74e-15,433;CL:0000034,1.25e-14,441;CL:0000990,4.25e-14,8;CL:0000451,1.32e-13,10;CL:0000542,2.72e-11,53;CL:0000051,2.72e-11,53;CL:0000838,1.77e-10,52;CL:0000094,4.44e-10,8;CL:0002393,6.92e-10,9;CL:0002397,6.92e-10,9;CL:0000840,1.58e-09,5;CL:0001029,1.58e-09,5;CL:0000453,4.16e-09,5;CL:0000235,2.83e-07,6;CL:0000081,5.96e-07,11;CL:0000775,6.95e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-38;42!CL:0000049;6.55e-18;108 | |||
|ontology_enrichment_disease=DOID:2531!1.13e-16!51;DOID:0060083!1.13e-16!51;DOID:1240!4.93e-11!39;DOID:8692!6.60e-08!31;DOID:0060058!1.23e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.94e-07;51!DOID:0060083;2.94e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.65e-12,51;DOID:0060083,9.65e-12,51;DOID:1240,4.54e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.96e-49!102;UBERON:0003061!2.96e-49!102;UBERON:0002193!2.99e-45!112;UBERON:0002371!1.08e-34!80;UBERON:0001474!1.62e-30!86;UBERON:0002405!1.59e-26!115;UBERON:0004765!2.13e-22!101;UBERON:0001434!2.13e-22!101;UBERON:0002384!2.67e-17!375;UBERON:0000178!1.95e-11!15;UBERON:0000179!1.95e-11!15;UBERON:0000463!1.95e-11!15;UBERON:0003081!1.58e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-10;15!UBERON:0000179;1.75e-10;15!UBERON:0000463;1.75e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.94e-56,98;UBERON:0003061,1.94e-56,98;UBERON:0002193,4.83e-51,108;UBERON:0002371,3.63e-46,76;UBERON:0001474,1.41e-41,82;UBERON:0002405,5.57e-41,93;UBERON:0004765,2.05e-36,90;UBERON:0001434,3.85e-31,100;UBERON:0002384,7.33e-22,371;UBERON:0003081,7.06e-18,203;UBERON:0002204,1.54e-12,167;UBERON:0000178,1.84e-10,15;UBERON:0000179,1.84e-10,15;UBERON:0000463,1.84e-10,15 | |||
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| |||
|short_description=p9@LCP1 | |||
}} |
Revision as of 02:24, 11 September 2013
Short description: | p9@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_LCP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -40bp_to_M22300_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | P13796 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.94e-56 | 98 |
blood island | 1.94e-56 | 98 |
hemolymphoid system | 4.83e-51 | 108 |
bone marrow | 3.63e-46 | 76 |
bone element | 1.41e-41 | 82 |
immune system | 5.57e-41 | 93 |
skeletal element | 2.05e-36 | 90 |
skeletal system | 3.85e-31 | 100 |
connective tissue | 7.33e-22 | 371 |
lateral plate mesoderm | 7.06e-18 | 203 |
musculoskeletal system | 1.54e-12 | 167 |
blood | 1.84e-10 | 15 |
haemolymphatic fluid | 1.84e-10 | 15 |
organism substance | 1.84e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.65e-12 | 51 |
immune system cancer | 9.65e-12 | 51 |
leukemia | 4.54e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.