FFCP PHASE1:Hg19::chr15:58443521..58443530,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000559334_5end|coexpression_cluster_id=C1311|description=CAGE_peak_7_at_ENST00000559334_5end|id=chr15:58443521..58443530,+|ontology_enrichment_celltype=CL:0002057!4.06e-64!42;CL:0000860!1.32e-59!45;CL:0000766!1.79e-49!76;CL:0002194!3.25e-45!63;CL:0000576!3.25e-45!63;CL:0000040!3.25e-45!63;CL:0000559!3.25e-45!63;CL:0002009!9.91e-44!65;CL:0000839!2.20e-40!70;CL:0000557!9.04e-40!71;CL:0000763!2.12e-32!112;CL:0000049!2.12e-32!112;CL:0000738!5.41e-30!140;CL:0002087!3.15e-27!119;CL:0000037!1.21e-23!172;CL:0000566!1.21e-23!172;CL:0000775!3.36e-23!3;CL:0000988!4.11e-22!182;CL:0002031!2.85e-21!124;CL:0002032!1.04e-20!165;CL:0000837!1.04e-20!165;CL:0000842!3.82e-10!3;CL:0000134!4.72e-09!358;CL:0000094!5.01e-09!8;CL:0002320!8.64e-09!365;CL:0000219!7.30e-08!390;CL:0000224!7.99e-08!4;CL:0000048!9.44e-07!430|ontology_enrichment_celltype_v019=CL:0000775;9.52e-55;3!CL:0000094;4.65e-21;8!CL:0000860;1.92e-18;33!CL:0002057;1.92e-18;33!CL:0000081;1.64e-15;11!CL:0000473;1.79e-14;39!CL:0000234;1.79e-14;39!CL:0000766;3.36e-11;69!CL:0000576;2.78e-10;48!CL:0000763;7.50e-09;100|ontology_enrichment_celltype_v019_2=CL:0000775,6.02e-55,3;CL:0000766,4.56e-24,72;CL:0000094,3.92e-21,8;CL:0000860,1.19e-20,42;CL:0002057,1.19e-20,42;CL:0000473,4.83e-18,48;CL:0000234,4.83e-18,48;CL:0000763,6.17e-16,108;CL:0000049,6.17e-16,108;CL:0000081,1.45e-15,11;CL:0002194,2.21e-14,59;CL:0000576,2.21e-14,59;CL:0000040,2.21e-14,59;CL:0000559,2.21e-14,59;CL:0002009,6.55e-14,61;CL:0000839,7.53e-13,66;CL:0000557,1.18e-12,67;CL:0000738,1.50e-12,136;CL:0002032,1.66e-10,161;CL:0000837,1.66e-10,161;CL:0000037,4.85e-10,168;CL:0000988,1.70e-09,177;CL:0002087,2.89e-07,115;CL:0002031,6.02e-07,120|ontology_enrichment_development_v019=CL:0002057;3.04e-13;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.30e-35!102;UBERON:0003061!1.30e-35!102;UBERON:0002371!6.29e-35!80;UBERON:0001474!2.96e-32!86;UBERON:0002193!4.29e-32!112;UBERON:0004765!6.05e-27!101;UBERON:0001434!6.05e-27!101;UBERON:0002405!3.18e-23!115;UBERON:0002204!8.04e-15!167;UBERON:0003081!1.12e-14!216;UBERON:0002384!1.97e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.66e-11,98;UBERON:0003061,3.66e-11,98;UBERON:0002371,3.87e-11,76;UBERON:0001474,2.61e-10,82;UBERON:0002193,4.30e-10,108;UBERON:0004765,2.27e-09,90;UBERON:0002405,4.64e-09,93;UBERON:0001434,2.10e-08,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0.651032612147555,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0.236482229888585,1.03423704220986,0,0,0.188242339542605,0.272906150057846,0,3.67300670845083,0,2.55734850319616,0,0,0,2.32167390902867,0.56738522469114,1.24564449799115,0.251248665256743,0,0.217188844705117,1.81619850790011,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4821264310493,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@ENST00000559334}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000559334_5end | |||
|coexpression_cluster_id=C1311 | |||
|description=CAGE_peak_7_at_ENST00000559334_5end | |||
|id=chr15:58443521..58443530,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.06e-64!42;CL:0000860!1.32e-59!45;CL:0000766!1.79e-49!76;CL:0002194!3.25e-45!63;CL:0000576!3.25e-45!63;CL:0000040!3.25e-45!63;CL:0000559!3.25e-45!63;CL:0002009!9.91e-44!65;CL:0000839!2.20e-40!70;CL:0000557!9.04e-40!71;CL:0000763!2.12e-32!112;CL:0000049!2.12e-32!112;CL:0000738!5.41e-30!140;CL:0002087!3.15e-27!119;CL:0000037!1.21e-23!172;CL:0000566!1.21e-23!172;CL:0000775!3.36e-23!3;CL:0000988!4.11e-22!182;CL:0002031!2.85e-21!124;CL:0002032!1.04e-20!165;CL:0000837!1.04e-20!165;CL:0000842!3.82e-10!3;CL:0000134!4.72e-09!358;CL:0000094!5.01e-09!8;CL:0002320!8.64e-09!365;CL:0000219!7.30e-08!390;CL:0000224!7.99e-08!4;CL:0000048!9.44e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000775;9.52e-55;3!CL:0000094;4.65e-21;8!CL:0000860;1.92e-18;33!CL:0002057;1.92e-18;33!CL:0000081;1.64e-15;11!CL:0000473;1.79e-14;39!CL:0000234;1.79e-14;39!CL:0000766;3.36e-11;69!CL:0000576;2.78e-10;48!CL:0000763;7.50e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.02e-55,3;CL:0000766,4.56e-24,72;CL:0000094,3.92e-21,8;CL:0000860,1.19e-20,42;CL:0002057,1.19e-20,42;CL:0000473,4.83e-18,48;CL:0000234,4.83e-18,48;CL:0000763,6.17e-16,108;CL:0000049,6.17e-16,108;CL:0000081,1.45e-15,11;CL:0002194,2.21e-14,59;CL:0000576,2.21e-14,59;CL:0000040,2.21e-14,59;CL:0000559,2.21e-14,59;CL:0002009,6.55e-14,61;CL:0000839,7.53e-13,66;CL:0000557,1.18e-12,67;CL:0000738,1.50e-12,136;CL:0002032,1.66e-10,161;CL:0000837,1.66e-10,161;CL:0000037,4.85e-10,168;CL:0000988,1.70e-09,177;CL:0002087,2.89e-07,115;CL:0002031,6.02e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.30e-35!102;UBERON:0003061!1.30e-35!102;UBERON:0002371!6.29e-35!80;UBERON:0001474!2.96e-32!86;UBERON:0002193!4.29e-32!112;UBERON:0004765!6.05e-27!101;UBERON:0001434!6.05e-27!101;UBERON:0002405!3.18e-23!115;UBERON:0002204!8.04e-15!167;UBERON:0003081!1.12e-14!216;UBERON:0002384!1.97e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.66e-11,98;UBERON:0003061,3.66e-11,98;UBERON:0002371,3.87e-11,76;UBERON:0001474,2.61e-10,82;UBERON:0002193,4.30e-10,108;UBERON:0004765,2.27e-09,90;UBERON:0002405,4.64e-09,93;UBERON:0001434,2.10e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0.651032612147555,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0.236482229888585,1.03423704220986,0,0,0.188242339542605,0.272906150057846,0,3.67300670845083,0,2.55734850319616,0,0,0,2.32167390902867,0.56738522469114,1.24564449799115,0.251248665256743,0,0.217188844705117,1.81619850790011,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4821264310493,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@ENST00000559334 | |||
}} |
Revision as of 07:36, 11 September 2013
Short description: | p7@ENST00000559334 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ENST00000559334_5end |
Coexpression cluster: | C1311_Neutrophils_Whole_Eosinophils_Basophils_blood_CD4_CD14 |
Association with transcript: | 0bp_to_ENST00000559334_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.02e-55 | 3 |
myeloid leukocyte | 4.56e-24 | 72 |
granulocyte | 3.92e-21 | 8 |
classical monocyte | 1.19e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-20 | 42 |
defensive cell | 4.83e-18 | 48 |
phagocyte | 4.83e-18 | 48 |
myeloid cell | 6.17e-16 | 108 |
common myeloid progenitor | 6.17e-16 | 108 |
blood cell | 1.45e-15 | 11 |
monopoietic cell | 2.21e-14 | 59 |
monocyte | 2.21e-14 | 59 |
monoblast | 2.21e-14 | 59 |
promonocyte | 2.21e-14 | 59 |
macrophage dendritic cell progenitor | 6.55e-14 | 61 |
myeloid lineage restricted progenitor cell | 7.53e-13 | 66 |
granulocyte monocyte progenitor cell | 1.18e-12 | 67 |
leukocyte | 1.50e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.66e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-10 | 161 |
hematopoietic stem cell | 4.85e-10 | 168 |
hematopoietic cell | 1.70e-09 | 177 |
nongranular leukocyte | 2.89e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 6.02e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.66e-11 | 98 |
blood island | 3.66e-11 | 98 |
bone marrow | 3.87e-11 | 76 |
bone element | 2.61e-10 | 82 |
hemolymphoid system | 4.30e-10 | 108 |
skeletal element | 2.27e-09 | 90 |
immune system | 4.64e-09 | 93 |
skeletal system | 2.10e-08 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.