FFCP PHASE1:Hg19::chr19:19496577..19496619,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29989 | |||
|TSSclassifier=S | |||
|UniProt=C9JJK9 | |||
|association_with_transcript=-19bp_to_ENST00000417582_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_5_at_GATAD2A_5end | |||
|id=chr19:19496577..19496619,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.50e-44!172;CL:0000566!2.50e-44!172;CL:0000988!6.92e-42!182;CL:0002032!5.88e-41!165;CL:0000837!5.88e-41!165;CL:0000763!3.28e-40!112;CL:0000049!3.28e-40!112;CL:0000738!7.05e-34!140;CL:0000766!5.42e-29!76;CL:0002031!7.36e-26!124;CL:0000557!1.62e-25!71;CL:0000839!2.00e-24!70;CL:0002087!2.77e-24!119;CL:0002057!5.99e-24!42;CL:0002009!2.09e-23!65;CL:0002194!2.24e-22!63;CL:0000576!2.24e-22!63;CL:0000040!2.24e-22!63;CL:0000559!2.24e-22!63;CL:0000860!3.55e-21!45;CL:0000063!6.19e-09!578;CL:0000134!2.91e-07!358;CL:0000094!9.16e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-19;33!CL:0002057;1.24e-19;33!CL:0000576;8.85e-17;48!CL:0000473;3.20e-16;39!CL:0000234;3.20e-16;39!CL:0000766;3.64e-14;69!CL:0000763;2.09e-12;100!CL:0000738;1.12e-08;136!CL:0002087;2.87e-08;104!CL:0000988;6.86e-08;177!CL:0000094;6.15e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.36e-46,168;CL:0000988,1.05e-43,177;CL:0000763,1.61e-43,108;CL:0000049,1.61e-43,108;CL:0002032,3.75e-43,161;CL:0000837,3.75e-43,161;CL:0000738,5.14e-36,136;CL:0000766,2.01e-32,72;CL:0000557,8.63e-29,67;CL:0002031,9.30e-28,120;CL:0000839,1.26e-27,66;CL:0002009,1.11e-26,61;CL:0002087,3.79e-26,115;CL:0002194,1.29e-25,59;CL:0000576,1.29e-25,59;CL:0000040,1.29e-25,59;CL:0000559,1.29e-25,59;CL:0000860,4.53e-24,42;CL:0002057,4.53e-24,42;CL:0000473,3.00e-23,48;CL:0000234,3.00e-23,48;CL:0000134,6.44e-08,354;CL:0002320,3.40e-07,361;CL:0000094,8.58e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.34e-18;42!CL:0000049;2.28e-12;108 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.90e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.27e-08,31;DOID:1240,2.32e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.21e-28!102;UBERON:0003061!3.21e-28!102;UBERON:0002193!1.49e-27!112;UBERON:0002371!4.51e-21!80;UBERON:0002405!5.33e-19!115;UBERON:0001474!3.83e-18!86;UBERON:0003081!7.88e-18!216;UBERON:0004765!2.60e-12!101;UBERON:0001434!2.60e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.32e-31,98;UBERON:0003061,6.32e-31,98;UBERON:0002193,6.29e-30,108;UBERON:0002405,7.67e-25,93;UBERON:0002371,1.17e-23,76;UBERON:0001474,1.66e-20,82;UBERON:0003081,3.02e-18,203;UBERON:0004765,3.71e-16,90;UBERON:0001434,1.26e-12,100 | |||
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| |||
|short_description=p5@GATAD2A | |||
}} |
Revision as of 19:36, 11 September 2013
Short description: | p5@GATAD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GATAD2A_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -19bp_to_ENST00000417582_5end |
EntrezGene: | GATAD2A |
HGNC: | 29989 |
UniProt: | C9JJK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.36e-46 | 168 |
hematopoietic cell | 1.05e-43 | 177 |
myeloid cell | 1.61e-43 | 108 |
common myeloid progenitor | 1.61e-43 | 108 |
hematopoietic oligopotent progenitor cell | 3.75e-43 | 161 |
hematopoietic multipotent progenitor cell | 3.75e-43 | 161 |
leukocyte | 5.14e-36 | 136 |
myeloid leukocyte | 2.01e-32 | 72 |
granulocyte monocyte progenitor cell | 8.63e-29 | 67 |
hematopoietic lineage restricted progenitor cell | 9.30e-28 | 120 |
myeloid lineage restricted progenitor cell | 1.26e-27 | 66 |
macrophage dendritic cell progenitor | 1.11e-26 | 61 |
nongranular leukocyte | 3.79e-26 | 115 |
monopoietic cell | 1.29e-25 | 59 |
monocyte | 1.29e-25 | 59 |
monoblast | 1.29e-25 | 59 |
promonocyte | 1.29e-25 | 59 |
classical monocyte | 4.53e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.53e-24 | 42 |
defensive cell | 3.00e-23 | 48 |
phagocyte | 3.00e-23 | 48 |
mesenchymal cell | 6.44e-08 | 354 |
connective tissue cell | 3.40e-07 | 361 |
granulocyte | 8.58e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.32e-31 | 98 |
blood island | 6.32e-31 | 98 |
hemolymphoid system | 6.29e-30 | 108 |
immune system | 7.67e-25 | 93 |
bone marrow | 1.17e-23 | 76 |
bone element | 1.66e-20 | 82 |
lateral plate mesoderm | 3.02e-18 | 203 |
skeletal element | 3.71e-16 | 90 |
skeletal system | 1.26e-12 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.27e-08 | 31 |
leukemia | 2.32e-07 | 39 |
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