FFCP PHASE1:Hg19::chr19:39901623..39901638,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3787|description=CAGE_peak_at_chr19:39901623..39901638,+|id=chr19:39901623..39901638,+|ontology_enrichment_celltype=CL:0000738!9.14e-27!140;CL:0002057!6.88e-26!42;CL:0000860!6.80e-25!45;CL:0000766!6.57e-21!76;CL:0002087!2.73e-20!119;CL:0000037!5.27e-20!172;CL:0000566!5.27e-20!172;CL:0002031!2.46e-19!124;CL:0002032!7.04e-19!165;CL:0000837!7.04e-19!165;CL:0000988!8.44e-19!182;CL:0000557!1.95e-17!71;CL:0002009!3.53e-17!65;CL:0002194!4.96e-16!63;CL:0000576!4.96e-16!63;CL:0000040!4.96e-16!63;CL:0000559!4.96e-16!63;CL:0000839!8.34e-16!70;CL:0000763!6.03e-15!112;CL:0000049!6.03e-15!112;CL:0002320!1.33e-08!365;CL:0000134!1.76e-08!358;CL:0002393!2.09e-08!9;CL:0002397!2.09e-08!9|ontology_enrichment_celltype_v019=CL:0000860;2.87e-27;33!CL:0002057;2.87e-27;33!CL:0000576;1.08e-24;48!CL:0000473;1.90e-20;39!CL:0000234;1.90e-20;39!CL:0000766;1.26e-19;69!CL:0000094;3.33e-12;8!CL:0002393;4.18e-12;6!CL:0002397;4.18e-12;6!CL:0002087;2.96e-11;104!CL:0000738;1.30e-10;136!CL:0000763;2.97e-10;100!CL:0000775;1.40e-09;3!CL:0000226;1.78e-09;3!CL:0000842;1.78e-09;3!CL:0000623;8.61e-09;3!CL:0000081;1.17e-08;11!CL:0000988;1.87e-08;177|ontology_enrichment_celltype_v019_2=CL:0000766,4.21e-44,72;CL:0000860,9.41e-44,42;CL:0002057,9.41e-44,42;CL:0000738,1.18e-43,136;CL:0000473,3.21e-40,48;CL:0000234,3.21e-40,48;CL:0000557,1.13e-34,67;CL:0000839,6.12e-33,66;CL:0002087,7.35e-33,115;CL:0000037,9.28e-33,168;CL:0002031,2.11e-32,120;CL:0002009,1.39e-31,61;CL:0002194,1.67e-30,59;CL:0000576,1.67e-30,59;CL:0000040,1.67e-30,59;CL:0000559,1.67e-30,59;CL:0000988,2.10e-30,177;CL:0002032,8.57e-30,161;CL:0000837,8.57e-30,161;CL:0000763,1.01e-27,108;CL:0000049,1.01e-27,108;CL:0000134,6.24e-15,354;CL:0002393,1.48e-14,9;CL:0002397,1.48e-14,9;CL:0002320,2.36e-14,361;CL:0000219,2.49e-12,386;CL:0000094,3.12e-12,8;CL:0000048,3.60e-11,427;CL:0000723,8.30e-11,433;CL:0000034,2.43e-10,441;CL:0000775,1.24e-09,3;CL:0000226,1.74e-09,3;CL:0000842,1.74e-09,3;CL:0000623,6.17e-09,3;CL:0000825,6.17e-09,3;CL:0000081,1.12e-08,11|ontology_enrichment_development_v019=CL:0002057;3.40e-32;42!CL:0000049;1.12e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.89e-21!102;UBERON:0003061!7.89e-21!102;UBERON:0002193!6.50e-18!112;UBERON:0002371!1.35e-16!80;UBERON:0001474!7.01e-15!86;UBERON:0002405!3.53e-13!115;UBERON:0004765!1.72e-12!101;UBERON:0001434!1.72e-12!101;UBERON:0002384!4.03e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.58e-31,98;UBERON:0003061,2.58e-31,98;UBERON:0002371,1.58e-29,76;UBERON:0002193,1.86e-27,108;UBERON:0001474,1.00e-26,82;UBERON:0004765,1.43e-23,90;UBERON:0002405,1.58e-22,93;UBERON:0001434,6.08e-22,100;UBERON:0003081,2.84e-14,203;UBERON:0002384,1.44e-13,371;UBERON:0002204,1.60e-10,167;UBERON:0000926,4.01e-07,315;UBERON:0004120,4.01e-07,315;UBERON:0006603,4.01e-07,315|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.0787107813136792,0.786728553697808,0,1.54816123316076,0,0,0,0.387336002901508,0.142169232487422,0,0.553995408531877,6.81851121398482,4.12320654360118,0,0,0,1.16318591023652,0,0.727752183563449,2.32429036905685,0.822335776043652,1.54853185447552,2.58923153089935,1.7931249457037,1.6553756092201,0.344745680736619,0.645484683583826,0,2.44715041405386,2.18324920046277,0.898893937780338,0.918251677112708,0.320929027076094,4.47535988059329,1.9791078011203,3.59034583718937,2.13112375266347,1.7412554317715,0.56738522469114,0,3.01498398308092,5.73631210262222,3.04064382587163,1.81619850790011,1.84138817993782,0.316462387440884,4.01385043992689,7.44115049877652,1.46761051855863,4.04383072127382,4.20495299956218,4.66104201421532,2.28010194992999,1.79025009479181,0.91332076882317,0,0,0,0,0,0,0,0,4.55370375287559,5.28513470433845,4.20500550937752,0,0,0,0.983548850569165,3.53709686474248,5.14003747498773,0,0.32592226663359,0,0,0,0.883817722424512,0.664601683750863,1.08321545506006,1.0247305578054,0.910415432919148,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0.759059076058509,0,0,0,0,0,0,0,0,1.81446068902259,4.01160293675261,1.15859523106239,2.43806866313962,0,0.255725123687061,0.722878304769133,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,15.511210565933,0,0,0,0.529636723252875,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0.213557388818567,0,0.900273288253207,0,2.06112432036503,0,0.843881661206331,0.0974370051611986,0.757301322732344,0.0920498986422993,0.484938170456436,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3787 | |||
|description=CAGE_peak_at_chr19:39901623..39901638,+ | |||
|id=chr19:39901623..39901638,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.14e-27!140;CL:0002057!6.88e-26!42;CL:0000860!6.80e-25!45;CL:0000766!6.57e-21!76;CL:0002087!2.73e-20!119;CL:0000037!5.27e-20!172;CL:0000566!5.27e-20!172;CL:0002031!2.46e-19!124;CL:0002032!7.04e-19!165;CL:0000837!7.04e-19!165;CL:0000988!8.44e-19!182;CL:0000557!1.95e-17!71;CL:0002009!3.53e-17!65;CL:0002194!4.96e-16!63;CL:0000576!4.96e-16!63;CL:0000040!4.96e-16!63;CL:0000559!4.96e-16!63;CL:0000839!8.34e-16!70;CL:0000763!6.03e-15!112;CL:0000049!6.03e-15!112;CL:0002320!1.33e-08!365;CL:0000134!1.76e-08!358;CL:0002393!2.09e-08!9;CL:0002397!2.09e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-27;33!CL:0002057;2.87e-27;33!CL:0000576;1.08e-24;48!CL:0000473;1.90e-20;39!CL:0000234;1.90e-20;39!CL:0000766;1.26e-19;69!CL:0000094;3.33e-12;8!CL:0002393;4.18e-12;6!CL:0002397;4.18e-12;6!CL:0002087;2.96e-11;104!CL:0000738;1.30e-10;136!CL:0000763;2.97e-10;100!CL:0000775;1.40e-09;3!CL:0000226;1.78e-09;3!CL:0000842;1.78e-09;3!CL:0000623;8.61e-09;3!CL:0000081;1.17e-08;11!CL:0000988;1.87e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.21e-44,72;CL:0000860,9.41e-44,42;CL:0002057,9.41e-44,42;CL:0000738,1.18e-43,136;CL:0000473,3.21e-40,48;CL:0000234,3.21e-40,48;CL:0000557,1.13e-34,67;CL:0000839,6.12e-33,66;CL:0002087,7.35e-33,115;CL:0000037,9.28e-33,168;CL:0002031,2.11e-32,120;CL:0002009,1.39e-31,61;CL:0002194,1.67e-30,59;CL:0000576,1.67e-30,59;CL:0000040,1.67e-30,59;CL:0000559,1.67e-30,59;CL:0000988,2.10e-30,177;CL:0002032,8.57e-30,161;CL:0000837,8.57e-30,161;CL:0000763,1.01e-27,108;CL:0000049,1.01e-27,108;CL:0000134,6.24e-15,354;CL:0002393,1.48e-14,9;CL:0002397,1.48e-14,9;CL:0002320,2.36e-14,361;CL:0000219,2.49e-12,386;CL:0000094,3.12e-12,8;CL:0000048,3.60e-11,427;CL:0000723,8.30e-11,433;CL:0000034,2.43e-10,441;CL:0000775,1.24e-09,3;CL:0000226,1.74e-09,3;CL:0000842,1.74e-09,3;CL:0000623,6.17e-09,3;CL:0000825,6.17e-09,3;CL:0000081,1.12e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-32;42!CL:0000049;1.12e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.89e-21!102;UBERON:0003061!7.89e-21!102;UBERON:0002193!6.50e-18!112;UBERON:0002371!1.35e-16!80;UBERON:0001474!7.01e-15!86;UBERON:0002405!3.53e-13!115;UBERON:0004765!1.72e-12!101;UBERON:0001434!1.72e-12!101;UBERON:0002384!4.03e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.58e-31,98;UBERON:0003061,2.58e-31,98;UBERON:0002371,1.58e-29,76;UBERON:0002193,1.86e-27,108;UBERON:0001474,1.00e-26,82;UBERON:0004765,1.43e-23,90;UBERON:0002405,1.58e-22,93;UBERON:0001434,6.08e-22,100;UBERON:0003081,2.84e-14,203;UBERON:0002384,1.44e-13,371;UBERON:0002204,1.60e-10,167;UBERON:0000926,4.01e-07,315;UBERON:0004120,4.01e-07,315;UBERON:0006603,4.01e-07,315 | |||
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| |||
|short_description=p@chr19:39901623..39901638,+ | |||
}} |
Revision as of 20:36, 11 September 2013
Short description: | p@chr19:39901623..39901638, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:39901623..39901638, + |
Coexpression cluster: | C3787_CD14_Eosinophils_Neutrophils_Peripheral_aorta_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.58e-31 | 98 |
blood island | 2.58e-31 | 98 |
bone marrow | 1.58e-29 | 76 |
hemolymphoid system | 1.86e-27 | 108 |
bone element | 1.00e-26 | 82 |
skeletal element | 1.43e-23 | 90 |
immune system | 1.58e-22 | 93 |
skeletal system | 6.08e-22 | 100 |
lateral plate mesoderm | 2.84e-14 | 203 |
connective tissue | 1.44e-13 | 371 |
musculoskeletal system | 1.60e-10 | 167 |
mesoderm | 4.01e-07 | 315 |
mesoderm-derived structure | 4.01e-07 | 315 |
presumptive mesoderm | 4.01e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.