FFCP PHASE1:Hg19::chr19:48825210..48825235,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=93233|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26560|TSSclassifier=S|UniProt=Q96M63|association_with_transcript=-19bp_to_uc002piu.1_5end|description=CAGE_peak_3_at_CCDC114_5end|id=chr19:48825210..48825235,-|ontology_enrichment_celltype=CL:0000037!1.09e-32!172;CL:0000566!1.09e-32!172;CL:0000988!1.16e-32!182;CL:0000738!2.38e-32!140;CL:0002032!8.54e-29!165;CL:0000837!8.54e-29!165;CL:0002031!1.78e-23!124;CL:0002087!1.89e-22!119;CL:0000542!1.51e-15!53;CL:0000051!1.51e-15!53;CL:0000838!2.40e-15!52;CL:0000763!1.03e-13!112;CL:0000049!1.03e-13!112;CL:0000860!4.50e-12!45;CL:0000766!4.64e-12!76;CL:0002057!5.71e-12!42;CL:0000236!2.90e-09!14;CL:0000557!1.21e-08!71;CL:0000945!1.26e-08!24;CL:0000826!1.26e-08!24;CL:0000839!1.41e-08!70;CL:0002009!5.96e-08!65;CL:0000791!1.61e-07!18;CL:0000789!1.61e-07!18;CL:0002420!1.61e-07!18;CL:0002419!1.61e-07!18;CL:0000790!1.61e-07!18;CL:0002393!2.19e-07!9;CL:0002397!2.19e-07!9;CL:0002194!3.37e-07!63;CL:0000576!3.37e-07!63;CL:0000040!3.37e-07!63;CL:0000559!3.37e-07!63;CL:0000094!3.43e-07!8|ontology_enrichment_celltype_v019=CL:0000236;8.60e-22;13!CL:0000094;5.96e-19;8!CL:0002393;1.41e-13;6!CL:0002397;1.41e-13;6!CL:0000081;2.49e-13;11!CL:0000542;8.99e-13;53!CL:0000945;1.60e-10;24!CL:0000791;2.03e-10;18!CL:0000789;2.03e-10;18!CL:0002419;2.03e-10;18!CL:0000766;3.89e-10;69!CL:0000775;1.17e-08;3!CL:0000738;1.83e-08;136!CL:0000623;1.99e-08;3!CL:0002087;3.74e-08;104!CL:0000875;2.38e-07;3!CL:0002396;2.38e-07;3!CL:0000576;3.05e-07;48!CL:0000767;3.22e-07;3!CL:0000084;6.15e-07;25|ontology_enrichment_celltype_v019_2=CL:0000738,8.77e-42,136;CL:0000037,1.18e-36,168;CL:0000988,2.06e-35,177;CL:0002032,1.54e-32,161;CL:0000837,1.54e-32,161;CL:0002031,1.01e-28,120;CL:0002087,1.75e-25,115;CL:0000838,3.63e-20,52;CL:0000236,5.03e-20,14;CL:0000542,1.18e-19,53;CL:0000051,1.18e-19,53;CL:0002393,1.52e-19,9;CL:0002397,1.52e-19,9;CL:0000094,6.07e-19,8;CL:0000766,8.02e-19,72;CL:0000763,5.95e-14,108;CL:0000049,5.95e-14,108;CL:0000081,2.52e-13,11;CL:0000860,1.32e-12,42;CL:0002057,1.32e-12,42;CL:0000134,1.32e-11,354;CL:0002320,4.46e-11,361;CL:0000945,1.60e-10,24;CL:0000826,1.60e-10,24;CL:0000473,1.81e-10,48;CL:0000234,1.81e-10,48;CL:0000791,1.90e-10,18;CL:0000789,1.90e-10,18;CL:0002420,1.90e-10,18;CL:0002419,1.90e-10,18;CL:0000790,1.90e-10,18;CL:0000557,2.02e-10,67;CL:0000219,2.47e-10,386;CL:0000839,1.87e-09,66;CL:0000775,1.10e-08,3;CL:0000623,2.03e-08,3;CL:0000825,2.03e-08,3;CL:0000034,2.61e-08,441;CL:0002009,3.25e-08,61;CL:0000875,1.35e-07,3;CL:0002396,1.35e-07,3;CL:0002194,1.60e-07,59;CL:0000576,1.60e-07,59;CL:0000040,1.60e-07,59;CL:0000559,1.60e-07,59;CL:0000048,1.71e-07,427;CL:0000723,3.48e-07,433;CL:0000767,3.55e-07,3;CL:0000084,5.89e-07,25;CL:0000827,5.89e-07,25;CL:0000625,9.18e-07,11|ontology_enrichment_development_v019=CL:0000051;8.99e-13;53!CL:0000790;2.03e-10;18!CL:0002057;3.27e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.56e-13!102;UBERON:0003061!7.56e-13!102;UBERON:0002193!1.29e-10!112;UBERON:0000178!1.27e-08!15;UBERON:0000179!1.27e-08!15;UBERON:0000463!1.27e-08!15;UBERON:0002371!1.71e-07!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-12,98;UBERON:0003061,1.23e-12,98;UBERON:0002384,6.16e-11,371;UBERON:0002193,9.06e-11,108;UBERON:0002371,1.17e-09,76;UBERON:0001474,1.49e-08,82;UBERON:0002405,1.04e-07,93;UBERON:0004765,2.54e-07,90|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.458480434487708,0.492603536699674,0.236132343941038,2.75354993794233,1.15148819429164,1.39334510984468,0.919421224478927,0.6024118375565,0,0.232401601740905,0.142169232487422,4.9912074686924,2.76997704265939,2.00544447470142,1.30206522429511,0.447830948479849,0,0,0.726991193897824,0.377875943688809,0.485168122375632,0.697287110717054,0,1.23882548358041,0.575384784644301,0.512321413058201,0,1.72372840368309,0,0,1.12945403725563,1.63743690034707,0.224723484445085,0.306083892370903,0.641858054152187,0,0.329851300186716,0.199463657621632,1.70489900213078,0.290209238628584,0,0.622822248995575,0.502497330513487,1.0429658368404,0.868755378820466,0.605399502633369,1.84138817993782,0.316462387440884,1.69004229049553,3.18906449947565,3.14487968262564,1.90958672949042,0.750884464207532,1.12507910687956,3.70516566863623,1.59133341759272,1.46131323011707,3.51992488922645,4.36910889009705,4.44754626931777,3.84057200309856,2.80277190925209,4.59801951963587,5.2883589822789,8.58648379081828,5.69212969109448,4.69789751496751,2.29363936875137,10.5737062863221,1.68152568894461,1.05353633910031,0.590129310341499,1.17903228824749,2.46721798799411,0.668745981562712,1.30368906653436,1.4203434172042,0,1.00269411196656,2.06224135232386,0.886135578334485,0.541607727530031,1.28091319725675,1.1705341280389,0.657751618414705,0.2763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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=93233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26560 | |||
|TSSclassifier=S | |||
|UniProt=Q96M63 | |||
|association_with_transcript=-19bp_to_uc002piu.1_5end | |||
|description=CAGE_peak_3_at_CCDC114_5end | |||
|id=chr19:48825210..48825235,- | |||
|ontology_enrichment_celltype=CL:0000037!1.09e-32!172;CL:0000566!1.09e-32!172;CL:0000988!1.16e-32!182;CL:0000738!2.38e-32!140;CL:0002032!8.54e-29!165;CL:0000837!8.54e-29!165;CL:0002031!1.78e-23!124;CL:0002087!1.89e-22!119;CL:0000542!1.51e-15!53;CL:0000051!1.51e-15!53;CL:0000838!2.40e-15!52;CL:0000763!1.03e-13!112;CL:0000049!1.03e-13!112;CL:0000860!4.50e-12!45;CL:0000766!4.64e-12!76;CL:0002057!5.71e-12!42;CL:0000236!2.90e-09!14;CL:0000557!1.21e-08!71;CL:0000945!1.26e-08!24;CL:0000826!1.26e-08!24;CL:0000839!1.41e-08!70;CL:0002009!5.96e-08!65;CL:0000791!1.61e-07!18;CL:0000789!1.61e-07!18;CL:0002420!1.61e-07!18;CL:0002419!1.61e-07!18;CL:0000790!1.61e-07!18;CL:0002393!2.19e-07!9;CL:0002397!2.19e-07!9;CL:0002194!3.37e-07!63;CL:0000576!3.37e-07!63;CL:0000040!3.37e-07!63;CL:0000559!3.37e-07!63;CL:0000094!3.43e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000236;8.60e-22;13!CL:0000094;5.96e-19;8!CL:0002393;1.41e-13;6!CL:0002397;1.41e-13;6!CL:0000081;2.49e-13;11!CL:0000542;8.99e-13;53!CL:0000945;1.60e-10;24!CL:0000791;2.03e-10;18!CL:0000789;2.03e-10;18!CL:0002419;2.03e-10;18!CL:0000766;3.89e-10;69!CL:0000775;1.17e-08;3!CL:0000738;1.83e-08;136!CL:0000623;1.99e-08;3!CL:0002087;3.74e-08;104!CL:0000875;2.38e-07;3!CL:0002396;2.38e-07;3!CL:0000576;3.05e-07;48!CL:0000767;3.22e-07;3!CL:0000084;6.15e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.77e-42,136;CL:0000037,1.18e-36,168;CL:0000988,2.06e-35,177;CL:0002032,1.54e-32,161;CL:0000837,1.54e-32,161;CL:0002031,1.01e-28,120;CL:0002087,1.75e-25,115;CL:0000838,3.63e-20,52;CL:0000236,5.03e-20,14;CL:0000542,1.18e-19,53;CL:0000051,1.18e-19,53;CL:0002393,1.52e-19,9;CL:0002397,1.52e-19,9;CL:0000094,6.07e-19,8;CL:0000766,8.02e-19,72;CL:0000763,5.95e-14,108;CL:0000049,5.95e-14,108;CL:0000081,2.52e-13,11;CL:0000860,1.32e-12,42;CL:0002057,1.32e-12,42;CL:0000134,1.32e-11,354;CL:0002320,4.46e-11,361;CL:0000945,1.60e-10,24;CL:0000826,1.60e-10,24;CL:0000473,1.81e-10,48;CL:0000234,1.81e-10,48;CL:0000791,1.90e-10,18;CL:0000789,1.90e-10,18;CL:0002420,1.90e-10,18;CL:0002419,1.90e-10,18;CL:0000790,1.90e-10,18;CL:0000557,2.02e-10,67;CL:0000219,2.47e-10,386;CL:0000839,1.87e-09,66;CL:0000775,1.10e-08,3;CL:0000623,2.03e-08,3;CL:0000825,2.03e-08,3;CL:0000034,2.61e-08,441;CL:0002009,3.25e-08,61;CL:0000875,1.35e-07,3;CL:0002396,1.35e-07,3;CL:0002194,1.60e-07,59;CL:0000576,1.60e-07,59;CL:0000040,1.60e-07,59;CL:0000559,1.60e-07,59;CL:0000048,1.71e-07,427;CL:0000723,3.48e-07,433;CL:0000767,3.55e-07,3;CL:0000084,5.89e-07,25;CL:0000827,5.89e-07,25;CL:0000625,9.18e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;8.99e-13;53!CL:0000790;2.03e-10;18!CL:0002057;3.27e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.56e-13!102;UBERON:0003061!7.56e-13!102;UBERON:0002193!1.29e-10!112;UBERON:0000178!1.27e-08!15;UBERON:0000179!1.27e-08!15;UBERON:0000463!1.27e-08!15;UBERON:0002371!1.71e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-12,98;UBERON:0003061,1.23e-12,98;UBERON:0002384,6.16e-11,371;UBERON:0002193,9.06e-11,108;UBERON:0002371,1.17e-09,76;UBERON:0001474,1.49e-08,82;UBERON:0002405,1.04e-07,93;UBERON:0004765,2.54e-07,90 | |||
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| |||
|short_description=p3@CCDC114 | |||
}} |
Revision as of 21:35, 11 September 2013
Short description: | p3@CCDC114 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CCDC114_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_uc002piu.1_5end |
EntrezGene: | CCDC114 |
HGNC: | 26560 |
UniProt: | Q96M63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-12 | 98 |
blood island | 1.23e-12 | 98 |
connective tissue | 6.16e-11 | 371 |
hemolymphoid system | 9.06e-11 | 108 |
bone marrow | 1.17e-09 | 76 |
bone element | 1.49e-08 | 82 |
immune system | 1.04e-07 | 93 |
skeletal element | 2.54e-07 | 90 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.