FFCP PHASE1:Hg19::chr2:74669009..74669077,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10466 | |||
|TSSclassifier=S | |||
|UniProt=Q9BST9 | |||
|association_with_transcript=0bp_to_ENST00000272430,ENST00000472518,NM_001015055,uc002sle.2,uc010ffe.1,uc010ffg.1_5end | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_1_at_RTKN_5end | |||
|id=chr2:74669009..74669077,- | |||
|ontology_enrichment_celltype=CL:0000066!1.82e-25!254;CL:0000223!1.92e-16!59;CL:0002076!1.24e-14!43;CL:0002368!6.88e-09!13;CL:0002251!2.03e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.01e-14;42!CL:0002368;3.87e-10;13!CL:0002251;8.91e-10;20!CL:1000497;7.67e-08;17!CL:0002518;7.67e-08;17!CL:1000507;8.04e-08;10!CL:1000494;8.04e-08;10!CL:0002202;1.70e-07;9!CL:0002632;1.70e-07;9!CL:1000449;9.69e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.51e-34,253;CL:0000223,1.97e-21,58;CL:0002076,8.13e-19,42;CL:0002368,3.72e-10,13;CL:0002251,9.07e-10,20;CL:1000497,7.59e-08,17;CL:0002518,7.59e-08,17;CL:1000507,7.80e-08,10;CL:1000494,7.80e-08,10;CL:0002202,1.66e-07,9;CL:0002632,1.66e-07,9;CL:1000449,9.45e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;1.67e-11;58!UBERON:0003104;7.76e-08;31 | |||
|ontology_enrichment_disease=DOID:305!4.91e-13!106;DOID:1749!8.84e-07!14;DOID:7!9.35e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;7.07e-08;25!DOID:1749;7.46e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.01e-17,106;DOID:0050687,1.16e-10,143;DOID:299,6.49e-08,25;DOID:1749,6.93e-08,14;DOID:7,1.35e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.16e-16!169;UBERON:0000925!6.16e-16!169;UBERON:0006595!6.16e-16!169;UBERON:0000466!5.18e-14!126;UBERON:0000481!5.68e-14!347;UBERON:0005177!1.24e-13!107;UBERON:0001007!4.50e-12!155;UBERON:0001555!4.50e-12!155;UBERON:0007026!4.50e-12!155;UBERON:0000064!1.34e-11!219;UBERON:0000464!1.50e-11!104;UBERON:0000062!2.35e-11!511;UBERON:0001008!4.76e-11!45;UBERON:0006554!7.60e-11!44;UBERON:0005911!1.26e-10!82;UBERON:0000475!1.43e-10!365;UBERON:0004921!2.47e-10!129;UBERON:0004185!2.47e-10!129;UBERON:0000119!3.25e-10!312;UBERON:0007023!3.98e-10!115;UBERON:0009569!4.00e-10!113;UBERON:0000483!4.40e-10!309;UBERON:0004111!8.00e-10!241;UBERON:0000077!1.31e-09!130;UBERON:0000489!2.70e-09!32;UBERON:0005172!2.93e-09!55;UBERON:0005173!2.93e-09!55;UBERON:0003103!3.80e-09!69;UBERON:0002113!1.36e-08!27;UBERON:0003918!1.36e-08!27;UBERON:0005095!1.36e-08!27;UBERON:0007687!1.36e-08!27;UBERON:0000468!1.06e-07!659;UBERON:0005157!1.15e-07!51;UBERON:0002530!1.25e-07!59;UBERON:0004121!1.47e-07!169;UBERON:0001048!1.54e-07!168;UBERON:0001004!1.81e-07!72;UBERON:0002365!2.16e-07!31;UBERON:0002330!2.16e-07!31;UBERON:0000467!2.66e-07!625;UBERON:0002417!2.74e-07!61;UBERON:0000916!2.74e-07!61;UBERON:0001041!2.92e-07!98;UBERON:0000922!3.09e-07!612;UBERON:0000480!3.78e-07!626;UBERON:0000477!4.91e-07!286;UBERON:0002553!5.92e-07!70;UBERON:0000153!8.64e-07!129;UBERON:0007811!8.64e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.84e-14;30!UBERON:0001008;2.84e-14;30!UBERON:0000489;2.76e-11;29!UBERON:0002113;1.24e-10;24!UBERON:0011143;1.24e-10;24!UBERON:0002365;1.25e-08;31!UBERON:0002330;1.25e-08;31!UBERON:0004211;8.04e-08;10!UBERON:0009773;8.04e-08;10!UBERON:0001231;8.04e-08;10!UBERON:0004810;8.04e-08;10!UBERON:0004921;2.91e-07;33!UBERON:0004807;7.22e-07;22!UBERON:0005172;8.56e-07;52!UBERON:0005173;8.56e-07;52!UBERON:0006555;9.69e-07;15!UBERON:0004819;9.69e-07;15!UBERON:0001285;9.69e-07;15!UBERON:0007684;9.69e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.29e-19,160;UBERON:0000925,5.29e-19,160;UBERON:0006595,5.29e-19,160;UBERON:0005177,9.27e-17,101;UBERON:0001008,1.04e-15,48;UBERON:0006554,1.80e-15,47;UBERON:0001007,1.80e-14,145;UBERON:0001555,1.80e-14,145;UBERON:0007026,1.80e-14,145;UBERON:0004921,1.04e-13,118;UBERON:0005911,6.84e-13,82;UBERON:0009569,6.97e-12,112;UBERON:0000489,8.04e-12,31;UBERON:0011216,3.99e-11,223;UBERON:0002113,4.58e-11,26;UBERON:0003918,4.58e-11,26;UBERON:0011143,4.58e-11,26;UBERON:0005095,4.58e-11,26;UBERON:0007687,4.58e-11,26;UBERON:0007023,5.19e-11,114;UBERON:0005172,6.40e-11,54;UBERON:0005173,6.40e-11,54;UBERON:0001041,1.17e-10,87;UBERON:0004111,1.52e-09,240;UBERON:0003103,2.10e-09,68;UBERON:0001004,4.40e-09,74;UBERON:0002365,9.53e-09,31;UBERON:0002330,9.53e-09,31;UBERON:0002417,1.83e-08,60;UBERON:0000916,1.83e-08,60;UBERON:0005157,4.11e-08,47;UBERON:0000922,5.24e-08,592;UBERON:0005153,6.30e-08,37;UBERON:0002530,6.45e-08,59;UBERON:0004810,7.80e-08,10;UBERON:0005181,2.17e-07,35;UBERON:0010371,2.93e-07,104;UBERON:0005178,3.73e-07,34;UBERON:0002224,3.73e-07,34;UBERON:0001048,4.97e-07,160;UBERON:0000483,5.04e-07,306;UBERON:0006555,5.87e-07,16;UBERON:0004819,5.87e-07,16;UBERON:0000119,7.58e-07,309;UBERON:0005423,7.77e-07,581;UBERON:0004211,9.45e-07,15;UBERON:0009773,9.45e-07,15;UBERON:0001231,9.45e-07,15;UBERON:0001285,9.45e-07,15;UBERON:0007684,9.45e-07,15;UBERON:0004208,9.45e-07,15 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0,23.3447239676433,90.0163506684432,25.1207577949698,30.0694355180437,0.247532705920093,0.331397375727916,0,0,0,0,0.738726348460727,2.24400760368678,0.313454721478088,0,0.958120975510189,1.12988375635323,3.59143007015371,2.54511827294832,2.44003422072406,0,0.383829398097213,0.619264493264304,77.2313828562299,84.33765725791,33.2778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,2.68280343881454,0.511450247374121,0,0,0.289693037921647,3.9764297352555,27.7381876072502,1.98523116044542,3.54767035940102,2.72287835648691,8.57912944510018,107.831405334592,61.1794330594308,0,0.174129737299267,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,5.23678112241891,5.32190474002959,9.51842024437861,0.367663080345869,0,0.357198913136319,0.44905874525234,0.450445921933289,0,0,0,0,0,77.6247412813711,0,0,0,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0,0.269421344139376,0.326923806226917,0.908144565869588,0,0.468642863667593,0,2.2818872861778,0.149448680551801,0.587172493218824,0.809364721840658,0.140450806702248,0.204154171254893,0.859840221182376,0,0,0,0.910161361938026,0,0.505008341862199,0.250237039743928,0,0,0,0,0.226864366320042,0,0,0,0.900273288253207,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,54.8860822983763,38.1844568827169,42.1602755221836,24.3947412259191,22.2650010780095,19.5205824020791,18.3480067377206,19.681026368299,9.85438869504741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,21.5483559197112,31.450470933684,23.6315962672562,0,15.6195316949754,0,89.995234035073,60.6969467591146,70.9734545226114,45.5535150179966,0.977424915930974,0,0,1.39116485970092,0.352226082707465,4.47535988059329,3.24089858803628,7.80042024161853,6.3216351836742,4.29243081047436,0,0,0.148631162288728,37.4935335947108,29.5648545629993,28.2132443512349,39.1370744211447,47.6639659162898,88.944781566329,0,0,0.829312462163088,1.72943944100354,1.00993946741104,0,0,0,3.4214489204541,0,0,0,1.45770409648969,0.43596006883328,0.51336800074665,0,0,0,0,0,0.514414748524284,2.83698264046557,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0.591092280605782,0.215627574859517,0.256686072559497,1.01637849688985,0,0,0.502548796003046,0,0.749007023947182,0,0,0.36807447515742,0,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0,0,2.0694614258501,0,0,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0.106727557803444,35.7690534306586,13.3148351608398,16.0266855464731,0,0.767309866440312,0,0,0,0.160853921143607,1.48418066444991,1.07946785661859,0.887808626565635,1.14978018419333,1.03850885836724,0.464841513839837,14.382274501403,60.552954031592,18.0478738314357,0,0,0.393373244878272,38.35196709713,20.6401103439832,40.7861879971965,49.6873363821086,16.6771573650744,0,0,1.72732732881711,3.08454505380579,8.67028600140329,28.5963171097266,28.5461425810443,36.5673443928639,21.4919764533291,0,0,2.56450125116389,0.656029291399411,0.650756789328606,8.65544497840867,0,0,67.1890679455522,48.1044582067026,0,0.386682873168488,0.462145851343933,0.307007349452259,0.275673144969061,0.429680979473094,0.870100163485371,0.596586391912706,0.178064071293475,24.7927373041467,31.5191710478774,49.5137324478986,19.5234517051211,0,0,0.6970372701606,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0,1.15755106853338,0,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0,0.633322905892992,0,1.89736586882858,1.74967360122491,38.4888450902048,60.9975070737567,83.8460583432184,9.60266767923147,86.5315799069172,80.8663083204603,82.4780085578217,47.5527438428406,0,0,0,0,0,0,0,0,18.3737402339254,20.2120769605305,34.3056302373444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.702551333885,1.31857361344705,14.8059836534406,0,2.55722532125772,33.901716832752,15.1451987224646,28.8731059973278,0,3.51673541026282,0.111308705022906,5.27372397525631,0,2.19172787076177,5.8019622261541,11.0850409055881,0,14.0316678225619,0.311039587661807,15.0978829927509,13.2475669259951,0,2.56472854656027,0,0,0.969332746095218,2.87581104301739,0,20.8342208868187,16.7923199992696,2.17499872630438,12.972453104547,22.3743212257634,20.0929529502746,2.41320361269025,0,0,0.885741385813839,2.41192877250816,0,3.42795705786796,1.77328571372128,0.87754158861589,0,20.6347141532333,3.53971189117467,0,47.2656003995523,17.7720135931349,23.57647970707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| |||
|short_description=p1@RTKN | |||
}} |
Revision as of 19:47, 12 September 2013
Short description: | p1@RTKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RTKN_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 0bp_to_ENST00000272430, ENST00000472518, NM_001015055, uc002sle.2, uc010ffe.1, uc010ffg.1_5end |
EntrezGene: | RTKN |
HGNC: | 10466 |
UniProt: | Q9BST9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.51e-34 | 253 |
endodermal cell | 1.97e-21 | 58 |
endo-epithelial cell | 8.13e-19 | 42 |
respiratory epithelial cell | 3.72e-10 | 13 |
epithelial cell of alimentary canal | 9.07e-10 | 20 |
kidney cell | 7.59e-08 | 17 |
kidney epithelial cell | 7.59e-08 | 17 |
kidney tubule cell | 7.80e-08 | 10 |
nephron tubule epithelial cell | 7.80e-08 | 10 |
epithelial cell of tracheobronchial tree | 1.66e-07 | 9 |
epithelial cell of lower respiratory tract | 1.66e-07 | 9 |
epithelial cell of nephron | 9.45e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.01e-17 | 106 |
cell type cancer | 1.16e-10 | 143 |
adenocarcinoma | 6.49e-08 | 25 |
squamous cell carcinoma | 6.93e-08 | 14 |
disease of anatomical entity | 1.35e-07 | 39 |
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