FFCP PHASE1:Hg19::chr7:26413020..26413035,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C469|description=CAGE_peak_at_chr7:26413020..26413035,+|id=chr7:26413020..26413035,+|ontology_enrichment_celltype=CL:0002194!1.76e-38!63;CL:0000576!1.76e-38!63;CL:0000040!1.76e-38!63;CL:0000559!1.76e-38!63;CL:0002009!2.77e-38!65;CL:0002087!6.56e-38!119;CL:0000766!1.83e-36!76;CL:0000738!7.35e-36!140;CL:0002057!6.57e-35!42;CL:0000860!1.57e-34!45;CL:0000557!5.63e-34!71;CL:0000839!3.50e-33!70;CL:0002031!1.45e-32!124;CL:0000037!4.17e-31!172;CL:0000566!4.17e-31!172;CL:0002032!2.62e-30!165;CL:0000837!2.62e-30!165;CL:0000988!2.68e-29!182;CL:0000763!9.34e-27!112;CL:0000049!9.34e-27!112;CL:0002393!3.96e-08!9;CL:0002397!3.96e-08!9;CL:0000945!1.96e-07!24;CL:0000826!1.96e-07!24|ontology_enrichment_celltype_v019=CL:0000860;3.23e-59;33!CL:0002057;3.23e-59;33!CL:0000473;1.28e-56;39!CL:0000234;1.28e-56;39!CL:0000576;6.20e-41;48!CL:0000766;3.48e-34;69!CL:0000763;1.17e-15;100!CL:0002087;1.16e-13;104!CL:0000235;7.87e-13;6!CL:0000738;3.51e-11;136!CL:0000775;5.24e-11;3!CL:0000875;5.04e-10;3!CL:0002396;5.04e-10;3!CL:0002393;3.39e-08;6!CL:0002397;3.39e-08;6!CL:0000988;3.67e-08;177!CL:0000219;3.74e-07;193!CL:0000094;9.33e-07;8|ontology_enrichment_celltype_v019_2=CL:0000473,5.10e-90,48;CL:0000234,5.10e-90,48;CL:0000860,3.17e-78,42;CL:0002057,3.17e-78,42;CL:0002009,4.40e-71,61;CL:0002194,6.12e-70,59;CL:0000576,6.12e-70,59;CL:0000040,6.12e-70,59;CL:0000559,6.12e-70,59;CL:0000766,1.43e-69,72;CL:0000557,7.02e-64,67;CL:0000839,1.50e-61,66;CL:0000763,1.47e-47,108;CL:0000049,1.47e-47,108;CL:0000738,2.05e-47,136;CL:0002087,1.70e-45,115;CL:0002031,3.14e-43,120;CL:0002032,2.94e-38,161;CL:0000837,2.94e-38,161;CL:0000037,7.62e-38,168;CL:0000988,2.65e-35,177;CL:0002393,1.05e-15,9;CL:0002397,1.05e-15,9;CL:0000235,1.16e-12,6;CL:0000134,2.10e-12,354;CL:0002320,6.29e-12,361;CL:0000775,4.33e-11,3;CL:0000219,2.97e-10,386;CL:0000875,6.70e-10,3;CL:0002396,6.70e-10,3;CL:0000048,3.19e-08,427;CL:0000723,6.06e-08,433;CL:0000034,1.39e-07,441;CL:0000094,8.68e-07,8|ontology_enrichment_development_v019=CL:0002057;1.63e-53;42!CL:0000049;4.85e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.69e-29!102;UBERON:0003061!3.69e-29!102;UBERON:0002371!2.08e-28!80;UBERON:0002193!2.08e-26!112;UBERON:0001474!4.64e-26!86;UBERON:0004765!7.90e-21!101;UBERON:0001434!7.90e-21!101;UBERON:0002405!4.49e-18!115;UBERON:0001049!6.28e-07!57;UBERON:0005068!6.28e-07!57;UBERON:0006241!6.28e-07!57;UBERON:0007135!6.28e-07!57|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.50e-55,76;UBERON:0001474,1.97e-50,82;UBERON:0002390,1.03e-47,98;UBERON:0003061,1.03e-47,98;UBERON:0004765,4.47e-45,90;UBERON:0002405,2.65e-43,93;UBERON:0002193,2.52e-42,108;UBERON:0001434,1.41e-39,100;UBERON:0002204,1.07e-19,167;UBERON:0003081,1.42e-17,203;UBERON:0002384,2.81e-11,371;UBERON:0000926,9.61e-08,315;UBERON:0004120,9.61e-08,315;UBERON:0006603,9.61e-08,315|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.229240217243854,0.328402357799783,0.629686250509434,0,0,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,1.00272223735071,0.434021741431704,0.447830948479849,0.32389366601898,0.257575567634187,1.01778767145695,1.51150377475524,1.21292030593908,0.929716147622738,1.6446715520873,2.16794459626573,2.3015391385772,2.0492856522328,3.07426898855161,3.10271112662957,4.51839278508678,4.06279459783025,0.941211697713023,1.09162460023138,1.57306439111559,1.83650335422542,1.28371610830437,2.55734850319616,0.989553900560148,1.59570926097305,2.98357325372886,12.7692064996577,3.40431134814684,5.60540024096017,1.50749199154046,3.65038042894141,1.95469960234605,9.08099253950053,4.41933163185078,7.59509729858123,2.32380814943136,1.70083439972035,1.67726916406701,0.898629049171961,0.450530678524519,0.48217676009124,2.28010194992999,2.18808344918999,1.27864907635244,0,0.546138611262131,1.77901850772711,2.13365111283254,0,0.574752439954483,1.32208974556972,0,1.1384259382189,0.587237189370939,1.14681968437569,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0.557052284425868,1.17842362989935,0,0.541607727530031,0.25618263945135,0.390178042679635,0.493313713811028,0.552700035571697,0.289803085735052,0,0,0,0.453237370790265,0,0,0.253019692019503,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0.348259474598534,0.797747763113191,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2727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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C469 | |||
|description=CAGE_peak_at_chr7:26413020..26413035,+ | |||
|id=chr7:26413020..26413035,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.76e-38!63;CL:0000576!1.76e-38!63;CL:0000040!1.76e-38!63;CL:0000559!1.76e-38!63;CL:0002009!2.77e-38!65;CL:0002087!6.56e-38!119;CL:0000766!1.83e-36!76;CL:0000738!7.35e-36!140;CL:0002057!6.57e-35!42;CL:0000860!1.57e-34!45;CL:0000557!5.63e-34!71;CL:0000839!3.50e-33!70;CL:0002031!1.45e-32!124;CL:0000037!4.17e-31!172;CL:0000566!4.17e-31!172;CL:0002032!2.62e-30!165;CL:0000837!2.62e-30!165;CL:0000988!2.68e-29!182;CL:0000763!9.34e-27!112;CL:0000049!9.34e-27!112;CL:0002393!3.96e-08!9;CL:0002397!3.96e-08!9;CL:0000945!1.96e-07!24;CL:0000826!1.96e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.23e-59;33!CL:0002057;3.23e-59;33!CL:0000473;1.28e-56;39!CL:0000234;1.28e-56;39!CL:0000576;6.20e-41;48!CL:0000766;3.48e-34;69!CL:0000763;1.17e-15;100!CL:0002087;1.16e-13;104!CL:0000235;7.87e-13;6!CL:0000738;3.51e-11;136!CL:0000775;5.24e-11;3!CL:0000875;5.04e-10;3!CL:0002396;5.04e-10;3!CL:0002393;3.39e-08;6!CL:0002397;3.39e-08;6!CL:0000988;3.67e-08;177!CL:0000219;3.74e-07;193!CL:0000094;9.33e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.10e-90,48;CL:0000234,5.10e-90,48;CL:0000860,3.17e-78,42;CL:0002057,3.17e-78,42;CL:0002009,4.40e-71,61;CL:0002194,6.12e-70,59;CL:0000576,6.12e-70,59;CL:0000040,6.12e-70,59;CL:0000559,6.12e-70,59;CL:0000766,1.43e-69,72;CL:0000557,7.02e-64,67;CL:0000839,1.50e-61,66;CL:0000763,1.47e-47,108;CL:0000049,1.47e-47,108;CL:0000738,2.05e-47,136;CL:0002087,1.70e-45,115;CL:0002031,3.14e-43,120;CL:0002032,2.94e-38,161;CL:0000837,2.94e-38,161;CL:0000037,7.62e-38,168;CL:0000988,2.65e-35,177;CL:0002393,1.05e-15,9;CL:0002397,1.05e-15,9;CL:0000235,1.16e-12,6;CL:0000134,2.10e-12,354;CL:0002320,6.29e-12,361;CL:0000775,4.33e-11,3;CL:0000219,2.97e-10,386;CL:0000875,6.70e-10,3;CL:0002396,6.70e-10,3;CL:0000048,3.19e-08,427;CL:0000723,6.06e-08,433;CL:0000034,1.39e-07,441;CL:0000094,8.68e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-53;42!CL:0000049;4.85e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.69e-29!102;UBERON:0003061!3.69e-29!102;UBERON:0002371!2.08e-28!80;UBERON:0002193!2.08e-26!112;UBERON:0001474!4.64e-26!86;UBERON:0004765!7.90e-21!101;UBERON:0001434!7.90e-21!101;UBERON:0002405!4.49e-18!115;UBERON:0001049!6.28e-07!57;UBERON:0005068!6.28e-07!57;UBERON:0006241!6.28e-07!57;UBERON:0007135!6.28e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.50e-55,76;UBERON:0001474,1.97e-50,82;UBERON:0002390,1.03e-47,98;UBERON:0003061,1.03e-47,98;UBERON:0004765,4.47e-45,90;UBERON:0002405,2.65e-43,93;UBERON:0002193,2.52e-42,108;UBERON:0001434,1.41e-39,100;UBERON:0002204,1.07e-19,167;UBERON:0003081,1.42e-17,203;UBERON:0002384,2.81e-11,371;UBERON:0000926,9.61e-08,315;UBERON:0004120,9.61e-08,315;UBERON:0006603,9.61e-08,315 | |||
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| |||
|short_description=p@chr7:26413020..26413035,+ | |||
}} |
Revision as of 00:40, 14 September 2013
Short description: | p@chr7:26413020..26413035, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:26413020..26413035, + |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.50e-55 | 76 |
bone element | 1.97e-50 | 82 |
hematopoietic system | 1.03e-47 | 98 |
blood island | 1.03e-47 | 98 |
skeletal element | 4.47e-45 | 90 |
immune system | 2.65e-43 | 93 |
hemolymphoid system | 2.52e-42 | 108 |
skeletal system | 1.41e-39 | 100 |
musculoskeletal system | 1.07e-19 | 167 |
lateral plate mesoderm | 1.42e-17 | 203 |
connective tissue | 2.81e-11 | 371 |
mesoderm | 9.61e-08 | 315 |
mesoderm-derived structure | 9.61e-08 | 315 |
presumptive mesoderm | 9.61e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.