FFCP PHASE1:Hg19::chr10:75674555..75674573,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9052 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-43bp_to_Z36790_5end | |||
|description=CAGE_peak_7_at_PLAU_5end | |||
|id=chr10:75674555..75674573,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.36e-10!679;CL:0000004!2.36e-10!679;CL:0000255!2.36e-10!679;CL:0000012!4.50e-10!682;CL:0000144!1.55e-09!625;CL:0002321!2.43e-09!248;CL:0000220!3.04e-09!246;CL:0002371!1.02e-08!591;CL:0000066!6.83e-08!254;CL:0002076!3.72e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.28e-17;3!CL:0002621;2.86e-17;3!CL:0000771;4.06e-12;2!CL:0000239;2.89e-08;3!CL:1000615;2.89e-08;3!CL:0002306;2.89e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.75e-18,3;CL:0002621,2.36e-17,3;CL:0000771,4.68e-12,2;CL:0000239,2.84e-08,3;CL:1000615,2.84e-08,3;CL:0002306,2.84e-08,3;CL:0002076,2.94e-07,42;CL:0002251,9.44e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.06e-08;3!DOID:127;5.06e-08;3!DOID:3112;5.25e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.72e-08,3;DOID:127,4.72e-08,3;DOID:3112,4.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0006554!5.41e-09!44;UBERON:0001008!1.27e-08!45;UBERON:0003064!7.79e-08!37;UBERON:0002367!4.61e-07!11;UBERON:0010147!4.61e-07!11;UBERON:0009846!4.61e-07!11;UBERON:0003353!4.61e-07!11;UBERON:0004902!4.61e-07!11;UBERON:0003820!4.61e-07!11;UBERON:0009847!4.61e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.86e-17;3!UBERON:0001708;2.40e-13;4!UBERON:0008895;2.40e-13;4!UBERON:0003929;9.41e-13;7!UBERON:0000486;2.17e-11;12!UBERON:0003350;3.57e-11;8!UBERON:0011159;8.98e-11;5!UBERON:0010371;1.11e-09;31!UBERON:0006853;2.89e-08;3!UBERON:0007685;2.89e-08;3!UBERON:0004134;2.89e-08;3!UBERON:0003729;5.16e-07;13!UBERON:0001828;9.17e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.36e-17,3;UBERON:0010188,4.35e-15,6;UBERON:0002539,4.35e-15,6;UBERON:0008816,4.35e-15,6;UBERON:0001708,1.65e-13,4;UBERON:0008895,1.65e-13,4;UBERON:0003350,2.60e-11,8;UBERON:0011159,6.68e-11,5;UBERON:0006853,2.84e-08,3;UBERON:0007685,2.84e-08,3;UBERON:0004134,2.84e-08,3;UBERON:0000033,3.96e-08,56;UBERON:0003102,5.53e-08,99;UBERON:0008814,1.41e-07,18;UBERON:0000153,3.59e-07,62;UBERON:0007811,3.59e-07,62;UBERON:0003729,4.97e-07,13;UBERON:0003929,8.08e-07,54;UBERON:0001828,8.57e-07,8;UBERON:0000161,9.29e-07,36;UBERON:0000344,9.44e-07,20 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.738726348460727,0.612002073732759,1.25381888591235,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.641858054152187,0,0,0,0,0.870627715885752,0,0,0,0.521482918420201,0.868755378820466,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.661743720148475,1.77383517970051,0.087834785693126,0,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0,0,0.61417158655884,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,2.31913023795956,2.18196896472668,1.72082757233402,0.121973706129595,0,0.348581828608555,0.207322110030741,0.252320850875628,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,1.20725313949488,0,0.402115889646523,0.277765335475589,0.325808305310325,0,2.88662684050547,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.594524649154913,1.87467667973554,8.23112428174412,3.26082723657489,0.179117045405697,0.581267877027924,0.383382679165211,0,0.088048434013226,0.829312462163088,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,8.43335757932127,0,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0.234282829985426,0.601892199455438,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,1.3878872442239,0.355123450626254,0.246381468041427,1.03850885836724,0.813472649219715,0,16.6420370351726,0.276242966807689,0.918515585316854,2.1850940160806,0.786746489756545,0.902399225814824,0.539107359730903,0.784349769176855,0,0.633309773357254,0,0.340187410553031,0,0,0,1.50506932156456,0.254876273045038,2.49322802678617,1.34324852833307,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.154048617114644,0,0.137836572484531,0,0,0,0.267096106940212,2.31398881505369,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.824686816419805,0,0,0.421258456238981,0,0,0,0.409499734223957,1.83827061539827,1.13008116620243,0,1.32687795048244,0.876901770507525,0,0,0,1.239293992399,0.845086807596724,0,0,0.35667105148125,0,0.844430541190656,1.64647446479951,0,0,0.48111056362756,0,1.08890984861323,0.0941438007767792,0.86101074534246,3.36942951335251,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0.19980960958213,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.2249738915515,0,0,0.670869375198532,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,1.72844298240254,1.30634944043764,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.796483835818512,0.449803112163605,0.155262956876259,0,0,1.5652351854352,0.300515217994437,0,0,0.181848659202559,0.537052785212442,0,0.796191777397232,0.800055529326307,0,0,0,0.57785949122191,0,0,0,0,0.489473409012935,0.358177682162975,0.617602894321944,0,0.530067437837643,0,0.506827321959218,0,0,2.12701969324168,0,0.389720617678777,0,0.163565394255844,0.655219697692825,0,0,0.19998739585493,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8374728641192,0,0,0,0,0,0,0,0,0,0,2.20114318226015,0,0,0,0,0.0752103283492573,0,0,0,2.62035068016155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.681707238073262,0,0.68732060563215,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,0.43262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| |||
|short_description=p7@PLAU | |||
}} |
Revision as of 03:33, 11 January 2014
Short description: | p7@PLAU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PLAU_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_Z36790_5end |
EntrezGene: | PLAU |
HGNC: | 9052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.75e-18 | 3 |
gingival epithelial cell | 2.36e-17 | 3 |
eosinophil | 4.68e-12 | 2 |
brush border epithelial cell | 2.84e-08 | 3 |
kidney cortex tubule cell | 2.84e-08 | 3 |
epithelial cell of proximal tubule | 2.84e-08 | 3 |
endo-epithelial cell | 2.94e-07 | 42 |
epithelial cell of alimentary canal | 9.44e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.36e-17 | 3 |
protuberance | 4.35e-15 | 6 |
pharyngeal arch | 4.35e-15 | 6 |
embryonic head | 4.35e-15 | 6 |
jaw skeleton | 1.65e-13 | 4 |
splanchnocranium | 1.65e-13 | 4 |
epithelium of mucosa | 2.60e-11 | 8 |
primary subdivision of cranial skeletal system | 6.68e-11 | 5 |
renal cortex tubule | 2.84e-08 | 3 |
region of nephron tubule | 2.84e-08 | 3 |
proximal tubule | 2.84e-08 | 3 |
head | 3.96e-08 | 56 |
surface structure | 5.53e-08 | 99 |
pharyngeal arch system | 1.41e-07 | 18 |
anterior region of body | 3.59e-07 | 62 |
craniocervical region | 3.59e-07 | 62 |
mouth mucosa | 4.97e-07 | 13 |
gut epithelium | 8.08e-07 | 54 |
gingiva | 8.57e-07 | 8 |
orifice | 9.29e-07 | 36 |
mucosa | 9.44e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.72e-08 | 3 |
leiomyoma | 4.72e-08 | 3 |
papillary adenocarcinoma | 4.43e-07 | 1 |