FFCP PHASE1:Hg19::chr13:114894223..114894253,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:114894223..114894253,- | |||
|id=chr13:114894223..114894253,- | |||
|ontology_enrichment_celltype=CL:0002057!1.78e-12!42;CL:0002371!2.21e-11!591;CL:0000860!5.64e-11!45;CL:0000557!4.36e-10!71;CL:0000048!2.74e-09!430;CL:0000144!3.46e-09!625;CL:0000839!5.95e-09!70;CL:0000766!6.99e-09!76;CL:0002009!8.90e-09!65;CL:0000723!1.18e-08!436;CL:0002194!5.80e-08!63;CL:0000576!5.80e-08!63;CL:0000040!5.80e-08!63;CL:0000559!5.80e-08!63;CL:0000034!7.44e-08!444;CL:0002320!1.14e-07!365;CL:0000134!2.18e-07!358;CL:0000548!3.59e-07!679;CL:0000004!3.59e-07!679;CL:0000255!3.59e-07!679;CL:0000219!4.56e-07!390;CL:0000012!6.65e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-15;33!CL:0002057;2.38e-15;33!CL:0000708;9.79e-15;3!CL:0000473;2.23e-11;39!CL:0000234;2.23e-11;39!CL:0002262;6.67e-10;2!CL:1000398;6.67e-10;2!CL:0000576;4.12e-07;48!CL:0000064;7.12e-07;3!CL:0000067;7.12e-07;3!CL:0005012;7.12e-07;3!CL:0002304;7.12e-07;3!CL:0000346;7.12e-07;3!CL:1000428;7.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,9.62e-15,3;CL:0000860,4.57e-13,42;CL:0002057,4.57e-13,42;CL:0000473,3.96e-11,48;CL:0000234,3.96e-11,48;CL:0002262,3.52e-10,2;CL:1000398,3.52e-10,2;CL:0002194,5.73e-10,59;CL:0000576,5.73e-10,59;CL:0000040,5.73e-10,59;CL:0000559,5.73e-10,59;CL:0002009,1.46e-09,61;CL:0000766,4.36e-09,72;CL:0000839,1.18e-08,66;CL:0000557,1.73e-08,67;CL:0000346,4.67e-07,3;CL:1000428,4.67e-07,3;CL:0000064,6.72e-07,3;CL:0000067,6.72e-07,3;CL:0005012,6.72e-07,3;CL:0002304,6.72e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-09;42 | |||
|ontology_enrichment_disease=DOID:2394!4.53e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.58e-11!216;UBERON:0002371!2.00e-09!80;UBERON:0002390!3.17e-09!102;UBERON:0003061!3.17e-09!102;UBERON:0001474!1.36e-08!86;UBERON:0002193!1.39e-08!112;UBERON:0004535!1.27e-07!110;UBERON:0002384!1.33e-07!375;UBERON:0002405!3.43e-07!115;UBERON:0001009!4.53e-07!113;UBERON:0002049!9.84e-07!79;UBERON:0007798!9.84e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;9.79e-15;3!UBERON:0001281;6.67e-10;2!UBERON:0003497;6.67e-10;2!UBERON:0003909;6.67e-10;2!UBERON:0003835;6.67e-10;2!UBERON:0000412;7.12e-07;3!UBERON:0001778;7.12e-07;3!UBERON:0001992;7.12e-07;3!UBERON:0001280;7.12e-07;3!UBERON:0004647;7.12e-07;3!UBERON:0001775;7.12e-07;3!UBERON:0007625;8.15e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,9.62e-15,3;UBERON:0001281,3.52e-10,2;UBERON:0003497,3.52e-10,2;UBERON:0003909,3.52e-10,2;UBERON:0003835,3.52e-10,2;UBERON:0002390,2.58e-08,98;UBERON:0003061,2.58e-08,98;UBERON:0002193,3.02e-07,108;UBERON:0002371,3.39e-07,76;UBERON:0000412,4.67e-07,3;UBERON:0001992,4.67e-07,3;UBERON:0001280,4.67e-07,3;UBERON:0004647,4.67e-07,3;UBERON:0005171,4.67e-07,3;UBERON:0001778,6.72e-07,3;UBERON:0001775,6.72e-07,3;UBERON:0007625,7.03e-07,11 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.246242116153576,1.02000345622126,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0.755751887377619,0.485168122375632,0.232429036905685,1.23350366406548,1.23882548358041,0.28769239232215,0.256160706529101,0.709446689665756,0.689491361473237,1.93645405075148,1.35426486594342,0.376484679085209,0,0.224723484445085,0.612167784741805,1.28371610830437,1.27867425159808,0.329851300186716,0.398927315243264,0.426224750532694,1.45104619314292,1.13477044938228,2.4912889959823,1.00499466102697,0.521482918420201,0.434377689410233,0,2.94622108790052,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.661743720148475,1.77383517970051,1.05401742831751,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.732806975721629,1.31780417436063,0,0,0,0,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0.326923806226917,0.454072282934794,0.576175924479999,0,0,0,0.448346041655403,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0.70445216541493,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0.300343057843917,0,2.13049060256185,1.30788020649984,2.71351657537515,0.775630294546667,0,0,0,0,0.514414748524284,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.868687840005475,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0.12269149171914,0,0,0.831883446123229,0.356857977594324,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0,0.783204629850962,0.343143423810856,0,0.431428401637234,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0.887808626565635,0.492762936082855,0,0.464841513839837,0,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0.431831832204279,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0,0,0,0,0,0.94443704049192,2.0911118104818,0,0.532306030317022,1.73986598415015,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,1.01455188481352,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,5.2897173040096,0,0.811367035427949,0,0,0,0.146508179271894,0,0,3.40963376167696,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0,0.457987967009312,0,0,0.156980256395025,0,0,0,0.335643173951685,0,0,0.632994193584081,0,0,0,0,0,0,7.11650708833493,4.69542967996711,4.80340967725095,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,1.32930774541437,0.661983911750998,2.5114633472578,3.58417289318877,0,0.554698692052555,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.745515213392595,0,0.951329442515298,0.627617077873999,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,3.59190574687462,0.082092520749339,0.511164065356265,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.909894705249887,0,0.235265819698172,0,0,0.447764408660622,0.467426619694449,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.453692771289717,0,0.295710299979268,0.318593534327405,0,0.776314784381297,0.829412415681711,2.39257543102195,2.08698024724694,0.150257608997218,0.380805212168795,0.406870733204662,0.545545977607678,0.322231671127465,0.928067519756987,2.3885753321917,0,0.343395705182793,0,2.52369796457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| |||
|short_description=p@chr13:114894223..114894253,- | |||
}} |
Revision as of 18:52, 11 January 2014
Short description: | p@chr13:114894223..114894253, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114894223..114894253, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 9.62e-15 | 3 |
classical monocyte | 4.57e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.57e-13 | 42 |
defensive cell | 3.96e-11 | 48 |
phagocyte | 3.96e-11 | 48 |
endothelial cell of sinusoid | 3.52e-10 | 2 |
endothelial cell of hepatic sinusoid | 3.52e-10 | 2 |
monopoietic cell | 5.73e-10 | 59 |
monocyte | 5.73e-10 | 59 |
monoblast | 5.73e-10 | 59 |
promonocyte | 5.73e-10 | 59 |
macrophage dendritic cell progenitor | 1.46e-09 | 61 |
myeloid leukocyte | 4.36e-09 | 72 |
myeloid lineage restricted progenitor cell | 1.18e-08 | 66 |
granulocyte monocyte progenitor cell | 1.73e-08 | 67 |
hair follicle dermal papilla cell | 4.67e-07 | 3 |
stem cell of epidermis | 4.67e-07 | 3 |
ciliated cell | 6.72e-07 | 3 |
ciliated epithelial cell | 6.72e-07 | 3 |
multi-ciliated epithelial cell | 6.72e-07 | 3 |
non-pigmented ciliary epithelial cell | 6.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 9.62e-15 | 3 |
hepatic sinusoid | 3.52e-10 | 2 |
abdomen blood vessel | 3.52e-10 | 2 |
sinusoid | 3.52e-10 | 2 |
abdominal segment blood vessel | 3.52e-10 | 2 |
hematopoietic system | 2.58e-08 | 98 |
blood island | 2.58e-08 | 98 |
hemolymphoid system | 3.02e-07 | 108 |
bone marrow | 3.39e-07 | 76 |
dermal papilla | 4.67e-07 | 3 |
papillary layer of dermis | 4.67e-07 | 3 |
liver parenchyma | 4.67e-07 | 3 |
liver lobule | 4.67e-07 | 3 |
hepatic duct | 4.67e-07 | 3 |
ciliary epithelium | 6.72e-07 | 3 |
ciliary body | 6.72e-07 | 3 |
pigment epithelium of eye | 7.03e-07 | 11 |