FFCP PHASE1:Hg19::chr13:99121398..99121404,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_at_chr13:99121398..99121404,- | |||
|id=chr13:99121398..99121404,- | |||
|ontology_enrichment_celltype=CL:1000449!4.51e-13!16;CL:1000497!2.30e-11!18;CL:0002518!2.30e-11!18;CL:1000507!2.66e-11!12;CL:1000494!2.66e-11!12;CL:0000084!7.64e-11!25;CL:0000827!7.64e-11!25;CL:0000838!1.01e-10!52;CL:0000542!1.98e-10!53;CL:0000051!1.98e-10!53;CL:0002681!2.39e-10!13;CL:0002584!2.39e-10!13;CL:0000791!8.19e-09!18;CL:0000789!8.19e-09!18;CL:0002420!8.19e-09!18;CL:0002419!8.19e-09!18;CL:0000790!8.19e-09!18;CL:0000623!6.63e-07!3;CL:0000825!6.63e-07!3;CL:0000625!8.88e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.04e-13;1!CL:0000911;1.04e-13;1!CL:0000814;1.04e-13;1!CL:0002188;7.50e-11;5!CL:1000746;5.28e-08;7!CL:1000612;5.28e-08;7!CL:1000449;5.31e-08;15!CL:1000497;4.06e-07;17!CL:0002518;4.06e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.83e-13,1;CL:0000914,1.83e-13,1;CL:0000911,1.83e-13,1;CL:0000814,1.83e-13,1;CL:0002042,1.83e-13,1;CL:0002039,1.83e-13,1;CL:0002040,1.83e-13,1;CL:0002041,1.83e-13,1;CL:0002188,8.29e-11,5;CL:1000449,5.13e-08,15;CL:1000746,5.66e-08,7;CL:1000612,5.66e-08,7;CL:0000893,2.25e-07,2;CL:0002489,2.25e-07,2;CL:0000809,2.25e-07,2;CL:0000808,2.25e-07,2;CL:0000894,2.25e-07,2;CL:0000806,2.25e-07,2;CL:0000807,2.25e-07,2;CL:0000805,2.25e-07,2;CL:0002425,2.25e-07,2;CL:1000497,3.93e-07,17;CL:0002518,3.93e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002425;1.70e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.04e-13;1!DOID:0060061;1.04e-13;1!DOID:8691;1.04e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.85e-14,1;DOID:0060061,5.85e-14,1;DOID:8691,5.85e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0004211!4.51e-13!16;UBERON:0001285!4.51e-13!16;UBERON:0007684!4.51e-13!16;UBERON:0003220!4.51e-13!16;UBERON:0004208!4.51e-13!16;UBERON:0006555!3.62e-12!17;UBERON:0005103!3.62e-12!17;UBERON:0000083!3.62e-12!17;UBERON:0009201!3.62e-12!17;UBERON:0004819!3.62e-12!17;UBERON:0006553!3.62e-12!17;UBERON:0003074!3.62e-12!17;UBERON:0003060!3.62e-12!17;UBERON:0000080!2.30e-11!18;UBERON:0002120!2.30e-11!18;UBERON:0004875!2.30e-11!18;UBERON:0005721!2.30e-11!18;UBERON:0005754!2.30e-11!18;UBERON:0007297!2.30e-11!18;UBERON:0003887!2.46e-11!21;UBERON:0009773!2.66e-11!12;UBERON:0001231!2.66e-11!12;UBERON:0004810!2.66e-11!12;UBERON:0006554!9.34e-11!44;UBERON:0001008!2.02e-10!45;UBERON:0001225!2.39e-10!13;UBERON:0008987!2.39e-10!13;UBERON:0004876!5.29e-10!20;UBERON:0002113!9.25e-10!27;UBERON:0003918!9.25e-10!27;UBERON:0005095!9.25e-10!27;UBERON:0007687!9.25e-10!27;UBERON:0000353!1.38e-09!17;UBERON:0000489!3.90e-09!32;UBERON:0000058!9.95e-09!26;UBERON:0001851!4.01e-08!16;UBERON:0000365!1.43e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;5.28e-08;7!UBERON:0001229;5.28e-08;7!UBERON:0006555;5.31e-08;15!UBERON:0004819;5.31e-08;15!UBERON:0001285;5.31e-08;15!UBERON:0007684;5.31e-08;15!UBERON:0006554;7.76e-07;30!UBERON:0001008;7.76e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,5.13e-08,15;UBERON:0009773,5.13e-08,15;UBERON:0001231,5.13e-08,15;UBERON:0001285,5.13e-08,15;UBERON:0007684,5.13e-08,15;UBERON:0004208,5.13e-08,15;UBERON:0010532,5.66e-08,7;UBERON:0000074,5.66e-08,7;UBERON:0001229,5.66e-08,7;UBERON:0001230,5.66e-08,7;UBERON:0003220,5.66e-08,7;UBERON:0005749,5.66e-08,7;UBERON:0004199,5.66e-08,7;UBERON:0004209,5.66e-08,7;UBERON:0004198,5.66e-08,7;UBERON:0006555,1.51e-07,16;UBERON:0004819,1.51e-07,16;UBERON:0005103,4.41e-07,8;UBERON:0000083,4.41e-07,8;UBERON:0009201,4.41e-07,8;UBERON:0006553,4.41e-07,8;UBERON:0003074,4.41e-07,8;UBERON:0003060,4.41e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17342444007882,0.32592226663359,0.473447805734733,0,4.45641827540694,0.883817722424512,0.886135578334485,1.08321545506006,1.28091319725675,1.43065282315866,0.822189523018381,0.276350017785848,2.02862160014537,0,0.267540828089713,0,1.35971211237079,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,1.46139224653261,0,1.13733384070897,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29151611801369,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,1.1974762285969,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,2.76656284657122,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0.327130788511688,0,0,0.422624246717254,1.79988656269437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr13:99121398..99121404,- | |||
}} |
Revision as of 18:22, 11 January 2014
Short description: | p@chr13:99121398..99121404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr13:99121398..99121404, - |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.83e-13 | 1 |
immature NK T cell | 1.83e-13 | 1 |
effector T cell | 1.83e-13 | 1 |
mature NK T cell | 1.83e-13 | 1 |
immature NK T cell stage IV | 1.83e-13 | 1 |
immature NK T cell stage I | 1.83e-13 | 1 |
immature NK T cell stage II | 1.83e-13 | 1 |
immature NK T cell stage III | 1.83e-13 | 1 |
glomerular endothelial cell | 8.29e-11 | 5 |
epithelial cell of nephron | 5.13e-08 | 15 |
glomerular cell | 5.66e-08 | 7 |
kidney corpuscule cell | 5.66e-08 | 7 |
thymocyte | 2.25e-07 | 2 |
double negative thymocyte | 2.25e-07 | 2 |
double-positive, alpha-beta thymocyte | 2.25e-07 | 2 |
DN4 thymocyte | 2.25e-07 | 2 |
DN1 thymic pro-T cell | 2.25e-07 | 2 |
DN2 thymocyte | 2.25e-07 | 2 |
DN3 thymocyte | 2.25e-07 | 2 |
immature single positive thymocyte | 2.25e-07 | 2 |
early T lineage precursor | 2.25e-07 | 2 |
kidney cell | 3.93e-07 | 17 |
kidney epithelial cell | 3.93e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 5.13e-08 | 15 |
renal tubule | 5.13e-08 | 15 |
nephron tubule | 5.13e-08 | 15 |
nephron | 5.13e-08 | 15 |
uriniferous tubule | 5.13e-08 | 15 |
nephrogenic mesenchyme | 5.13e-08 | 15 |
primitive nephron | 5.66e-08 | 7 |
renal glomerulus | 5.66e-08 | 7 |
renal corpuscle | 5.66e-08 | 7 |
glomerular capsule | 5.66e-08 | 7 |
metanephric mesenchyme | 5.66e-08 | 7 |
glomerular tuft | 5.66e-08 | 7 |
S-shaped body | 5.66e-08 | 7 |
renal vesicle | 5.66e-08 | 7 |
comma-shaped body | 5.66e-08 | 7 |
excretory tube | 1.51e-07 | 16 |
kidney epithelium | 1.51e-07 | 16 |
mesonephric epithelium | 4.41e-07 | 8 |
mesonephric tubule | 4.41e-07 | 8 |
nephric duct | 4.41e-07 | 8 |
renal duct | 4.41e-07 | 8 |
mesonephric duct | 4.41e-07 | 8 |
pronephric duct | 4.41e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.85e-14 | 1 |
cutaneous T cell lymphoma | 5.85e-14 | 1 |
mycosis fungoides | 5.85e-14 | 1 |