FFCP PHASE1:Hg19::chr15:78556809..78556913,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55466 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14885 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WW22,F8WF76,C9JDE6,F5H170 | |||
|association_with_transcript=0bp_to_ENST00000343789,ENST00000423642,ENST00000440911,ENST00000483802_5end | |||
|description=CAGE_peak_1_at_DNAJA4_5end | |||
|id=chr15:78556809..78556913,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.02e-16!71;CL:0000839!2.44e-16!70;CL:0002009!7.67e-16!65;CL:0000860!3.22e-15!45;CL:0002194!4.06e-15!63;CL:0000576!4.06e-15!63;CL:0000040!4.06e-15!63;CL:0000559!4.06e-15!63;CL:0002057!2.38e-14!42;CL:0000766!3.32e-14!76;CL:0002031!7.66e-10!124;CL:0000738!1.05e-08!140;CL:0002087!2.82e-08!119;CL:0000763!8.69e-07!112;CL:0000049!8.69e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.56e-14;33!CL:0002057;7.56e-14;33!CL:0000473;2.34e-11;39!CL:0000234;2.34e-11;39!CL:0000576;7.00e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.62e-16,67;CL:0000839,1.59e-15,66;CL:0002009,4.98e-15,61;CL:0000860,1.66e-14,42;CL:0002057,1.66e-14,42;CL:0002194,2.66e-14,59;CL:0000576,2.66e-14,59;CL:0000040,2.66e-14,59;CL:0000559,2.66e-14,59;CL:0000473,4.02e-14,48;CL:0000234,4.02e-14,48;CL:0000766,2.67e-13,72;CL:0002031,1.38e-09,120;CL:0000738,1.85e-08,136;CL:0002087,4.74e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;5.30e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-47!115;UBERON:0001049!3.14e-24!57;UBERON:0005068!3.14e-24!57;UBERON:0006241!3.14e-24!57;UBERON:0007135!3.14e-24!57;UBERON:0002616!2.43e-20!59;UBERON:0003080!6.74e-20!42;UBERON:0002780!1.58e-19!41;UBERON:0001890!1.58e-19!41;UBERON:0006240!1.58e-19!41;UBERON:0003075!3.77e-17!86;UBERON:0007284!3.77e-17!86;UBERON:0002020!2.77e-16!34;UBERON:0003528!2.77e-16!34;UBERON:0001893!5.70e-16!34;UBERON:0002791!2.00e-15!33;UBERON:0002346!2.35e-15!90;UBERON:0002390!2.95e-15!102;UBERON:0003061!2.95e-15!102;UBERON:0001869!4.29e-15!32;UBERON:0002193!1.05e-14!112;UBERON:0005743!1.08e-14!86;UBERON:0000955!1.61e-14!69;UBERON:0006238!1.61e-14!69;UBERON:0003056!2.79e-14!61;UBERON:0002371!3.72e-14!80;UBERON:0001017!5.34e-14!82;UBERON:0002619!1.01e-12!22;UBERON:0001950!1.69e-11!20;UBERON:0001474!2.20e-11!86;UBERON:0000956!2.75e-11!25;UBERON:0000203!2.75e-11!25;UBERON:0000073!9.82e-11!94;UBERON:0001016!9.82e-11!94;UBERON:0000153!1.60e-09!129;UBERON:0007811!1.60e-09!129;UBERON:0000062!2.11e-09!511;UBERON:0000033!9.98e-09!123;UBERON:0004765!1.33e-08!101;UBERON:0001434!1.33e-08!101;UBERON:0002405!1.81e-08!115;UBERON:0003081!5.80e-08!216;UBERON:0002050!9.55e-07!605;UBERON:0005423!9.55e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.05e-14;41!UBERON:0001890;2.05e-14;41!UBERON:0003528;4.51e-14;34!UBERON:0002020;4.51e-14;34!UBERON:0001893;7.40e-14;34!UBERON:0001869;9.76e-14;32!UBERON:0002791;1.03e-13;32!UBERON:0000073;2.70e-13;53!UBERON:0002616;2.70e-13;53!UBERON:0007023;4.77e-13;114!UBERON:0002619;6.93e-13;22!UBERON:0001950;1.21e-11;20!UBERON:0000956;2.11e-11;25!UBERON:0000203;2.11e-11;25!UBERON:0000955;1.87e-07;68!UBERON:0001017;3.65e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.41e-47,114;UBERON:0001049,6.29e-24,56;UBERON:0005068,6.29e-24,56;UBERON:0006241,6.29e-24,56;UBERON:0007135,6.29e-24,56;UBERON:0000073,1.56e-22,53;UBERON:0002616,1.56e-22,53;UBERON:0002780,9.44e-20,41;UBERON:0001890,9.44e-20,41;UBERON:0003080,9.44e-20,41;UBERON:0006240,9.44e-20,41;UBERON:0003075,2.59e-18,82;UBERON:0007284,2.59e-18,82;UBERON:0003528,1.82e-16,34;UBERON:0002020,1.82e-16,34;UBERON:0001893,3.78e-16,34;UBERON:0002346,4.02e-16,86;UBERON:0001869,2.91e-15,32;UBERON:0002791,3.57e-15,32;UBERON:0002390,7.95e-15,98;UBERON:0003061,7.95e-15,98;UBERON:0000955,1.49e-14,68;UBERON:0006238,1.49e-14,68;UBERON:0003056,2.09e-14,61;UBERON:0002193,3.80e-14,108;UBERON:0001017,5.10e-14,81;UBERON:0002371,1.86e-13,76;UBERON:0002619,7.33e-13,22;UBERON:0002405,7.34e-13,93;UBERON:0010371,1.22e-12,104;UBERON:0001950,1.27e-11,20;UBERON:0000956,2.08e-11,25;UBERON:0000203,2.08e-11,25;UBERON:0001474,8.19e-11,82;UBERON:0001016,2.29e-10,89;UBERON:0010314,1.24e-09,132;UBERON:0004765,2.47e-08,90;UBERON:0002050,2.92e-08,564;UBERON:0000923,3.44e-08,560;UBERON:0010316,3.44e-08,560;UBERON:0005291,3.44e-08,560;UBERON:0006598,3.44e-08,560;UBERON:0010317,3.44e-08,560;UBERON:0002532,3.44e-08,560;UBERON:0005423,6.69e-08,581;UBERON:0000922,5.14e-07,592;UBERON:0001434,5.21e-07,100 | |||
|phase1_expression=2.54349730978779,4.06790995392868,1.83240725324762,3.00219895059391,3.5756887554183,0.872338524100369,2.53299878168311,3.15859936713415,3.65659879479774,6.14334841253772,4.88460817580699,4.58726881473362,4.48403862988371,0.495065411840187,0.662794751455832,1.34465029290355,1.20538905604795,1.46062018077475,0.487932798790507,2.95490539384291,3.06001036866379,0.626909442956176,3.43483184557268,3.69560947696787,3.26410862946487,0,0,0,7.47392126012918,7.29275856384704,8.97933515233241,4.59710612239464,4.2168828628955,8.13458822366933,0,0,6.45920966536664,17.7278530730201,8.02177789880567,8.68043482863407,6.26963327871788,8.74512898251245,9.78787157009909,12.5042485350426,34.0088349319929,73.5029705399083,27.4266263548708,60.4416795392084,112.423412634923,47.1815523408327,73.774283480381,144.254160232037,74.120321358373,109.73239620925,174.700167706701,21.6478690473995,31.3842072566523,109.665060409201,33.0570603760575,54.5579346029359,179.653732349531,19.1313754108295,31.9141852194611,83.5400511044081,24.9579945220582,74.3274644345393,183.732563453695,61.0534256573886,60.4920185367434,80.5770613855983,37.5347691632689,87.2817997290528,195.573755438467,6.12640330304631,7.44115049877652,6.49941801075965,4.04383072127382,4.6554836780867,4.018139667427,6.84030584978997,5.37075028437543,7.30656615058536,12.3197371122926,4.36910889009705,4.44754626931777,4.26730222566507,2.80277190925209,4.59801951963587,2.64417949113945,4.77026877267682,7.96898156753228,3.52342313622563,6.49864487812889,3.96513985737078,15.694239763483,9.48182705190277,15.343362068879,13.3623659334716,15.6257139239627,9.36244374187797,25.7478590640536,19.4113600351241,29.2240092611867,6.57321695622524,9.42738903919479,8.86135578334484,10.8321545506006,6.78883994546078,10.4047478047903,9.04408475320219,10.2249506580764,7.82468331484642,14.9769428793681,18.1927763101005,24.0431704751447,8.27158201692233,18.7778041864941,16.1504899376836,15.9402405972287,10.1940932583711,5.20866763085135,13.3063286222772,11.895434407144,12.6706745042874,8.74515085866421,10.1814218378927,9.03240796613151,11.0883708773603,12.5696892018248,14.7720891960455,14.6284119788377,4.02420515822182,1.79007586580942,0.722878304769133,3.00802746381534,1.73815822752988,2.3858578411533,0.973269740605272,5.0103453096956,3.54767035940102,2.98638271356629,36.4121829883641,5.46442932438813,7.41568885568859,11.3591587779139,15.3234168823355,14.758333617594,7.15471872916026,9.72391348326217,5.94332002127304,7.7517338873015,2.58070378531837,5.9013885273291,5.08777147731609,5.45349267072878,3.30141650328081,5.22487416342026,4.13466814670926,6.40379272836078,3.3472061276467,3.62546385398232,0.760272105718513,0.24406205754817,1.47065232138347,4.86085168729056,8.66207364355574,12.7981742396917,13.963823579932,9.19899824795299,10.4419222552494,5.67925406184263,3.9534125230819,27.1446184903828,9.59406914713576,0.496971951695318,0.379891534993739,0.397227542439656,0,1.41867352879343,1.12135520028461,1.06748995729705,0.24666754841716,3.42332138939743,2.82892411346345,2.28846664358842,2.72443369760877,0.576175924479999,3.51482147750695,0.624320153660641,3.4228309292667,0.597794722207204,0.939475989150119,2.75184005425824,3.08991774744947,3.0623125688234,2.08818339430006,3.09977343527296,0,0.741800787835671,3.64064544775211,0.718618141816238,2.35670559535693,2.25213335769535,2.77064115484183,2.19488810440419,2.75839016219118,3.15499923703853,1.58805056424029,1.4351170855109,0.85422955527427,0.211931901159562,0.600182192168805,0.515262646192195,1.28820270022815,2.41951913231067,1.0126579934476,0.974370051611986,2.77677151668526,0.828449087780694,1.13152239773168,1.06502877754984,2.82105875037393,1.3564847384839,2.89891279744945,2.72746120590835,3.44165514466805,2.43947412259191,1.85541675650079,1.74290914304278,1.24393266018445,1.00928340350251,0,3.12899064659632,1.28648187638577,1.38134921352481,3.71494342425583,0.721879481669586,4.8505788016336,3.20310911148393,5.06123162755312,5.84558055481688,4.57546832594053,5.21995362044413,3.91010793664477,3.33576490713088,5.77120735419586,2.21446636387394,4.20725321410337,3.7041661019826,1.47008711385542,0,1.96565443335525,8.86184860022106,0,0,3.25978839567199,0.768251997860379,4.49607013030478,3.71957197923034,4.35165692245089,4.23550796903422,3.11980435583874,1.44331342025273,0.927443239800615,3.87448690978212,4.33099343283221,4.1668696131895,5.89787871927255,11.8530659693891,2.57545848628462,11.3259822800203,13.806251643215,15.4576408780277,2.81201501960331,4.36753533317035,3.40260233381728,0.358234090811393,0.581267877027924,1.53353071666084,2.46331618947972,3.25779205848936,36.6970764507167,22.7709526398799,69.433338384509,70.4191647700155,72.959789281631,75.0191662144301,30.7930402840869,63.8558729687639,61.870669915847,103.469168612269,4.82163662685051,3.48768055066624,1.9067954313447,0.258543431515556,0,4.22651376278,1.86156681609409,2.08014873822732,3.60090323966999,4.25547396069835,5.59486575933809,2.00169191121407,5.96883765930587,5.76268235746538,4.23457039581856,1.77695974371273,5.543663110534,8.13886318060882,6.97226766880235,9.49743416229542,2.43247561282381,4.01805673145701,4.21667878966063,2.15662369942424,2.29723871668228,0,2.46128221334885,1.2328579353023,1.25342674267927,0,13.3980916937311,10.9970063178354,13.7327048819331,2.03275699377971,1.30139853857622,1.54657762555539,5.69555302136786,3.82763250991898,0.749007023947182,0,1.24324654030811,0.736148950314839,1.50051156317903,0.813795071099207,0.415941723061614,1.78428988797162,1.73472656537328,1.7571212248907,0.902838299183157,2.27407504055985,0,0.664225598535437,1.10621501125022,1.65078867489357,1.56640925970192,1.02943027143257,10.3384013061444,11.0014242417495,12.5938518208064,9.09382714338778,11.6504807657348,1.5119514666484,0.992431231275107,4.60385919864187,3.92924132206303,1.92208723883551,2.55853624533352,1.60853921143608,4.45254199334973,0.308419387605311,0.710246901252508,0.492762936082855,1.55776328755086,0.581051892299796,0.725156697549733,3.20810352485256,4.05156351317944,1.83703117063371,2.54927635209404,1.96686622439136,9.02399225814824,9.3958711267386,3.92174884588428,2.92278449306521,7.49416565139417,6.8240030442538,7.14393562161366,6.69339339916632,7.71136263451447,5.41892875087706,3.01013864312912,9.43042210266642,15.7904441696458,6.71624264166535,27.8460043340337,26.6664160045399,6.15480300279334,12.1365418908891,11.0628654185863,105.204872892324,0,0,3.44559322797703,4.55042172225565,3.21367859688319,0.676695028044854,3.23502095940753,3.37708084397485,4.13509717453592,1.18162269355101,1.30515024522806,2.55679882248303,1.4245125703478,5.45440220691228,7.68760269460425,11.1023059870288,8.29493803015509,0,0.31481234683064,0.6970372701606,3.69640296211307,1.06461206063404,0,0.55597265731176,0.572499546967965,3.34942532423701,3.48017367190598,3.8126038784765,2.303080121802,6.41908482050881,0.95460974377781,1.56989728039846,1.43897966066652,4.66712950551293,2.23843564456804,2.42618977887979,0,4.63384301862879,3.41343617362713,1.21856744815642,0,0.9554993798559,0.707027159768564,0,0.551365343546124,0,2.19225442626881,5.20897980840019,3.27947376023316,0.405820753925408,2.16876448669825,0.281695602532241,4.01551786171344,1.3754865741837,0.7133421029625,0.354761064070598,1.89996871767898,1.31717957183961,3.41525856389144,4.89908608342976,6.44688155260931,3.35151137767894,2.17781969722645,106.853213881644,4.3050537267123,5.05414427002877,8.42517291719684,8.4997658076575,19.7904567600546,25.9976650428408,25.6341234228373,16.4379925065874,9.46133228098247,20.1026726469742,23.2213518012389,25.3800056414167,0,0,2.45040215981032,0,0,0,0,0,0.766021480529467,0,3.24621940274555,0,0,0,0,0,0,11.9061827242718,18.7372344583744,0,17.8199643298906,16.3283558761464,11.5125907781217,8.20630000688569,0,0,0,0,0,10.1055891820439,13.6252606722861,0,0,0,9.78852387424529,11.8785872333055,15.3580351049616,105.379650663228,135.323978586913,0,5.27372397525631,0,33.6729100144308,14.919331438682,8.81764617489966,0,0,1.55519793830904,2.87578723671446,4.65455054156584,15.3471711068062,16.1775185244571,19.1586473877552,0,48.4666373047609,53.9910331301974,61.8802773803702,6.77112178821606,10.1453599995587,29.7249825928265,10.924171035408,16.272233618737,7.09163045303809,0.344743373241465,0,0.520874984799877,61.1161556211549,131.088328785818,45.774520895125,60.4868551823799,44.0365952240786,108.376386194062,0,20.9135616417905,7.31027455786072,0,0,0,0,5.74202087517455,2.65633020865401,4.79731298416771,0,0,8.97543082260845,0,0,0,0,10.9666239496461,0,0,0,0,6.96683351754953,8.93421401483726,8.55442202907076,0,0,0,44.2151432353241,68.2191000203971,55.7549380826307,0,2.73930466504926,9.71121518136371,45.3772063276799,9.67925728389311,27.8526213083746,6.76096402024821,0,0,0,0,0,0,1.13843818411917,0,9.89290508510246,8.42734617763648,10.0118087567463,114.44596769853,0,28.3496050677019,13.2291663925996,24.6346371159628,16.2941547700545,0,19.6603244479063,0,2.18586072873289,71.6678210220547,8.01760669212692,4.88968803534356,13.0206326791005,0,17.0026692241845,0,7.55017990592644,0,13.0465162343704,49.7314413041438,0,0,0,0,58.2407680048496,70.2324593715924,26.8267834940642,0.859530882839914,0.262887354279314,89.6496508083936,52.7068975226872,355.347147165523,86.4610072160632,154.092151281029,143.722418592566,103.328180684585,5.40449825313605,0,0,0,0,0,0,101.789400295591,114.002250915389,3.21506296930038,1.65047323916681,2.9080823662043,15.298224625502,75.8325915466791,98.1712835593679,1.34173875039706,17.494867020422,41.9636705079985,0,0,11.3229966418473,59.3197120889895,79.4510364438518,0,1.62899880526114,1.72844298240254,1.95952416065645,0,32.5907307374876,0.340776043570843,3.17273856256352,2.05173127149315,19.8760333368332,123.982355150727,138.579766626339,0,1.40963004463334,26.6968531419237,58.1655928868764,18.6407574906238,8.43482237080316,1.38328142328561,13.8843562154221,7.021753835472,114.787756510959,73.7028288426738,46.8708732448096,74.7549598018354,0,74.4297271172268,65.1620254576483,87.1328877717239,76.2634230267795,81.9765690857338,94.6970144856098,0,0,0,0,15.057012460683,5.1516839638757,19.854180919683,0.895528817321244,0.467426619694449,0,5.68209015825267,1.25783950876288,3.55924488638614,1.83072054717539,1.66354016139563,1.39893480524502,2.51353754982378,5.89398038505699,3.59842489730884,2.63947026689641,4.97647449409027,3.19010057469594,1.5652351854352,4.50772826991655,7.23529903120711,4.88244879845594,1.45478927362048,3.7593694964871,2.32016879939247,5.57334244178062,0,0,0,0,0,0,0,0.226705925512272,0,1.71315693154527,0,0.308801447160972,0,8.12770071351053,0,0,0,0,0,81.2959604572177,4.87150772098471,6.64324201566815,4.08913485639611,0,0,9.93166979785547,0,11.9494737257438,0,0,0,3.63686720070556,1.24415452006595,0,0,0,0,0.848662649770126,2.12574920101683,0.247871528518004,0,3.18004350653419,0,0,0.352675943690684,3.062454773532,87.8013507068602,45.3429044241872,85.8830161727474,39.7925746627065,22.1823092675112,65.699389841007,118.038696956883,39.9754376725632,8.14626063558513,14.7462154184675,0,5.08312931061488,0.762764190934334,15.1879183733222,0,11.8832318791826,0,10.9411961572633,0,0,16.8555938287432,76.4525457880227,63.2673259877216,109.337315349126,85.040601470029,25.1608412148381,7.67560873600055,38.2082607359757,1.58284119923659,10.8598063493656,110.890280026805,83.7346468324872,40.6666954838543,43.2558163567465,5.58824932024625,0.806637912890455,0,97.2646878898462,68.5352300524887,5.08233515801063,1.4460082245969,24.5683380622109,142.975186823562,22.9823173917307,11.8710633666234,0,0,32.1644448794954,0,0,2.43401581223611,3.20684545892101,1.86494547746733,0.51215543128185,5.53007729451273,17.2090943528111,0,0,26.2499971118376,3.89481676524885,0,0,0,10.894675931292,6.70548587402482,308.176126501438,79.8716637341602,18.5570309014112,18.9427287293064,15.2060651250369,0,15.5785318918615,1.6941912305844,0,14.4924329824007,11.4217753999758,4.80831033108706,36.6847491161988,15.1991959487421,0,53.3959030552651,65.3502080719589,34.2351139342554,3.56846940844415,6.95480993050916,91.2079114826117,0,10.8917902549451,0,0,16.7977369296699,19.7253591863953,57.0491540942776,0,78.5301711705065,24.4356386590611,10.0515099697926,1.11598505450025,5.0839319149456,2.16313281061895,0,0.109265571963696,0,2.85568723277549,23.2479142581038,0,4.011320628678,36.8284473340644,59.7560010248278,83.7461133853367,67.4383133019557,60.1319828960766,17.378703496853,9.10703628687686,121.54229059129,0.224263725161227,27.4319252178891,20.8180704626966,56.388637705313,64.6820939051181,21.552656964668,41.885767949323,32.6007149415093,14.9782014244193,3.4152750680869,0,3.77265848847665,44.5817790566563,12.3463858624695,8.54481974463051,280.283601932101,14.2904393449629,5.12909587685173 | |||
|short_description=p1@DNAJA4 | |||
}} |
Revision as of 00:43, 12 January 2014
Short description: | p1@DNAJA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNAJA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343789, ENST00000423642, ENST00000440911, ENST00000483802_5end |
EntrezGene: | DNAJA4 |
HGNC: | 14885 |
UniProt: | Q8WW22F8WF76C9JDE6F5H170 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.62e-16 | 67 |
myeloid lineage restricted progenitor cell | 1.59e-15 | 66 |
macrophage dendritic cell progenitor | 4.98e-15 | 61 |
classical monocyte | 1.66e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-14 | 42 |
monopoietic cell | 2.66e-14 | 59 |
monocyte | 2.66e-14 | 59 |
monoblast | 2.66e-14 | 59 |
promonocyte | 2.66e-14 | 59 |
defensive cell | 4.02e-14 | 48 |
phagocyte | 4.02e-14 | 48 |
myeloid leukocyte | 2.67e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 1.38e-09 | 120 |
leukocyte | 1.85e-08 | 136 |
nongranular leukocyte | 4.74e-08 | 115 |