FFCP PHASE1:Hg19::chr19:51223083..51223093,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50944 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15474 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-43bp_to_uc010yce.1_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_2_at_SHANK1_5end | |||
|id=chr19:51223083..51223093,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.65e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.53e-42!57;UBERON:0005068!4.53e-42!57;UBERON:0006241!4.53e-42!57;UBERON:0007135!4.53e-42!57;UBERON:0002020!4.84e-38!34;UBERON:0003528!4.84e-38!34;UBERON:0002616!1.27e-37!59;UBERON:0002619!2.28e-37!22;UBERON:0001869!2.60e-37!32;UBERON:0000073!1.90e-36!94;UBERON:0001016!1.90e-36!94;UBERON:0001893!8.31e-35!34;UBERON:0002780!6.94e-34!41;UBERON:0001890!6.94e-34!41;UBERON:0006240!6.94e-34!41;UBERON:0003080!6.23e-33!42;UBERON:0000955!1.10e-32!69;UBERON:0006238!1.10e-32!69;UBERON:0002791!1.35e-32!33;UBERON:0000956!1.89e-32!25;UBERON:0000203!1.89e-32!25;UBERON:0001017!2.69e-32!82;UBERON:0005743!3.04e-32!86;UBERON:0001950!4.52e-32!20;UBERON:0002346!6.39e-31!90;UBERON:0003075!1.15e-28!86;UBERON:0007284!1.15e-28!86;UBERON:0003056!1.68e-22!61;UBERON:0007023!3.42e-22!115;UBERON:0000924!1.01e-19!173;UBERON:0006601!1.01e-19!173;UBERON:0000033!2.49e-18!123;UBERON:0000153!3.02e-18!129;UBERON:0007811!3.02e-18!129;UBERON:0004121!5.07e-18!169;UBERON:0000200!3.49e-17!6;UBERON:0003076!3.99e-10!15;UBERON:0003057!3.99e-10!15;UBERON:0000349!4.98e-10!5;UBERON:0001872!1.27e-09!5;UBERON:0002771!1.44e-09!3;UBERON:0002021!1.69e-09!5;UBERON:0004732!2.76e-09!13;UBERON:0000025!3.11e-09!194;UBERON:0001871!3.55e-09!7;UBERON:0000988!2.21e-08!3;UBERON:0002298!7.75e-08!8;UBERON:0000064!8.45e-08!219;UBERON:0002308!1.90e-07!9;UBERON:0000125!1.90e-07!9;UBERON:0004733!2.27e-07!12;UBERON:0002028!2.27e-07!12;UBERON:0007277!2.27e-07!12;UBERON:0001954!2.55e-07!2;UBERON:0003022!2.55e-07!2;UBERON:0002421!2.55e-07!2;UBERON:0002600!2.55e-07!2;UBERON:0001897!5.44e-07!2;UBERON:0003714!5.60e-07!2;UBERON:0001870!6.28e-07!2;UBERON:0004111!6.87e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.19e-53;22!UBERON:0000956;9.09e-47;25!UBERON:0000203;9.09e-47;25!UBERON:0001950;3.51e-35;20!UBERON:0001954;1.00e-31;2!UBERON:0003022;1.00e-31;2!UBERON:0002421;1.00e-31;2!UBERON:0002600;1.00e-31;2!UBERON:0002791;7.93e-31;32!UBERON:0001869;7.93e-31;32!UBERON:0003528;1.35e-28;34!UBERON:0002020;1.35e-28;34!UBERON:0000349;1.91e-28;5!UBERON:0001893;2.92e-24;34!UBERON:0002780;1.47e-22;41!UBERON:0001890;1.47e-22;41!UBERON:0000073;6.12e-18;53!UBERON:0002616;6.12e-18;53!UBERON:0002022;1.65e-16;1!UBERON:0000941;1.65e-16;1!UBERON:0001785;1.65e-16;1!UBERON:0002464;1.65e-16;1!UBERON:0004904;1.65e-16;1!UBERON:0001021;1.65e-16;1!UBERON:0002021;4.12e-13;5!UBERON:0000200;2.49e-11;6!UBERON:0001871;7.15e-10;6!UBERON:0001876;3.71e-09;2!UBERON:0002771;4.18e-09;2!UBERON:0002702;4.18e-09;2!UBERON:0003714;6.42e-09;2!UBERON:0005162;6.42e-09;2!UBERON:0000122;6.42e-09;2!UBERON:0001016;1.25e-07;83!UBERON:0001017;2.97e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.87e-53,22;UBERON:0000956,7.35e-47,25;UBERON:0000203,7.35e-47,25;UBERON:0002791,8.37e-37,32;UBERON:0001869,8.37e-37,32;UBERON:0001950,3.52e-35,20;UBERON:0003528,1.15e-34,34;UBERON:0002020,1.15e-34,34;UBERON:0001893,1.15e-34,34;UBERON:0001954,5.37e-32,2;UBERON:0003022,5.37e-32,2;UBERON:0002421,5.37e-32,2;UBERON:0002600,5.37e-32,2;UBERON:0002780,8.67e-29,41;UBERON:0001890,8.67e-29,41;UBERON:0003080,8.67e-29,41;UBERON:0006240,8.67e-29,41;UBERON:0000349,1.32e-28,5;UBERON:0000073,1.87e-27,53;UBERON:0002616,1.87e-27,53;UBERON:0001049,5.73e-26,56;UBERON:0005068,5.73e-26,56;UBERON:0006241,5.73e-26,56;UBERON:0007135,5.73e-26,56;UBERON:0003056,8.04e-24,61;UBERON:0003075,2.46e-21,82;UBERON:0007284,2.46e-21,82;UBERON:0000955,5.37e-21,68;UBERON:0006238,5.37e-21,68;UBERON:0002346,2.60e-20,86;UBERON:0001016,3.71e-19,89;UBERON:0001017,1.42e-17,81;UBERON:0010371,1.15e-16,104;UBERON:0000941,1.41e-16,1;UBERON:0001785,1.41e-16,1;UBERON:0002464,1.41e-16,1;UBERON:0004904,1.41e-16,1;UBERON:0001021,1.41e-16,1;UBERON:0003902,1.41e-16,1;UBERON:0005425,1.41e-16,1;UBERON:0002022,2.25e-16,1;UBERON:0002021,4.39e-13,5;UBERON:0010314,6.07e-13,132;UBERON:0004121,1.34e-11,171;UBERON:0000924,1.34e-11,171;UBERON:0006601,1.34e-11,171;UBERON:0000200,2.49e-11,6;UBERON:0007023,4.03e-10,114;UBERON:0001871,7.00e-10,6;UBERON:0001876,3.71e-09,2;UBERON:0002771,4.02e-09,2;UBERON:0002702,4.34e-09,2;UBERON:0003714,5.94e-09,2;UBERON:0005162,5.94e-09,2;UBERON:0000122,5.94e-09,2;UBERON:0011216,4.10e-07,223;UBERON:0000025,5.41e-07,192 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18945432206256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,1.3269511191747,0,0.658156191461918,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,7.08257711780193,0,0,0,0,0,1.03274246318642,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,2.003054891304,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0.425149840203366,0.619678821295011,0.558644917973244,0.318004350653419,0,0,0,0,0.321146125482298,0,1.43670473151436,0.205116364240755,1.00828678488687,0.484100767249525,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,1.44680757550829,0.760989722326882,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.930896962757057,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@SHANK1 | |||
}} |
Revision as of 00:42, 21 January 2014
Short description: | p2@SHANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHANK1_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | -43bp_to_uc010yce.1_5end |
EntrezGene: | SHANK1 |
HGNC: | 15474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data