FFCP PHASE1:Hg19::chr1:183213340..183213356,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr1:183213340..183213356,+ | |||
|id=chr1:183213340..183213356,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.99e-30!254;CL:0002076!4.29e-19!43;CL:0000223!5.78e-12!59;CL:0002077!6.47e-12!33;CL:0002159!4.05e-11!13;CL:0000220!3.94e-10!246;CL:0002321!6.24e-10!248;CL:0000076!8.30e-10!62;CL:0000244!4.65e-09!4;CL:0000731!4.65e-09!4;CL:0002368!4.73e-09!13;CL:0002251!3.62e-08!21;CL:0000063!1.42e-07!578;CL:0002621!4.89e-07!3;CL:0000221!5.34e-07!71;CL:0002166!7.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.48e-25;4!CL:0000731;1.48e-25;4!CL:0002076;2.49e-25;42!CL:0002368;1.52e-22;13!CL:0002621;5.59e-19;3!CL:0000240;1.70e-16;6!CL:0000311;1.70e-16;6!CL:0000079;1.70e-16;6!CL:0000237;1.70e-16;6!CL:0002159;3.66e-15;14!CL:0000312;1.02e-11;5!CL:0002231;1.36e-09;3!CL:0002166;4.59e-09;3!CL:0000307;5.85e-09;3!CL:0002251;2.08e-07;20!CL:0002336;3.40e-07;1!CL:0002261;3.40e-07;1!CL:0002170;3.40e-07;1!CL:0002077;5.21e-07;34!CL:0002327;8.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.97e-30,42;CL:0000244,1.58e-25,4;CL:0000731,1.58e-25,4;CL:0002368,1.63e-22,13;CL:0000223,8.70e-21,58;CL:0000066,3.03e-19,253;CL:0002621,4.52e-19,3;CL:0000240,1.73e-16,6;CL:0000311,1.73e-16,6;CL:0000079,1.73e-16,6;CL:0000237,1.73e-16,6;CL:0000036,1.73e-16,6;CL:0000357,1.73e-16,6;CL:0000114,1.73e-16,6;CL:0002159,4.37e-15,14;CL:0000312,1.29e-11,5;CL:0002231,1.36e-09,3;CL:0002166,3.82e-09,3;CL:0000068,7.01e-09,3;CL:0000069,7.01e-09,3;CL:0000307,7.01e-09,3;CL:0000377,7.01e-09,3;CL:0002077,7.51e-08,34;CL:0002251,1.92e-07,20;CL:0002336,2.35e-07,1;CL:0002261,2.35e-07,1;CL:0002170,2.35e-07,1;CL:0002321,3.13e-07,250;CL:0002327,8.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;1.70e-16;6!CL:0000114;1.70e-16;6!CL:0000223;9.36e-12;58!CL:0000377;5.85e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!6.36e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!6.86e-11!82;UBERON:0000365!3.62e-10!5;UBERON:0004119!3.70e-10!169;UBERON:0000925!3.70e-10!169;UBERON:0006595!3.70e-10!169;UBERON:0005910!2.29e-08!6;UBERON:0001004!5.86e-08!72;UBERON:0005153!3.38e-07!37;UBERON:0001949!4.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.32e-24;12!UBERON:0000365;1.72e-20;5!UBERON:0001949;5.59e-19;3!UBERON:0005910;4.16e-17;6!UBERON:0003929;2.00e-08;7!UBERON:0005911;9.07e-08;36!UBERON:0003729;1.25e-07;13!UBERON:0003350;1.99e-07;8!UBERON:0001828;1.99e-07;8!UBERON:0002171;3.40e-07;1!UBERON:0004913;3.40e-07;1!UBERON:0003703;3.40e-07;1!UBERON:0006518;3.40e-07;1!UBERON:0008949;3.40e-07;1!UBERON:0000101;3.40e-07;1!UBERON:0002167;3.40e-07;1!UBERON:0001174;3.40e-07;1!UBERON:0004914;3.40e-07;1!UBERON:0001708;5.30e-07;4!UBERON:0008895;5.30e-07;4!UBERON:0001911;8.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.81e-20,5;UBERON:0001949,4.52e-19,3;UBERON:0005910,4.35e-17,6;UBERON:0004119,3.85e-11,160;UBERON:0000925,3.85e-11,160;UBERON:0006595,3.85e-11,160;UBERON:0001004,1.33e-09,74;UBERON:0005911,1.51e-08,82;UBERON:0003102,7.05e-08,99;UBERON:0003729,1.06e-07,13;UBERON:0003350,1.84e-07,8;UBERON:0001828,1.84e-07,8;UBERON:0002171,3.62e-07,1;UBERON:0006518,3.62e-07,1;UBERON:0008949,3.62e-07,1;UBERON:0000101,3.62e-07,1;UBERON:0002167,3.62e-07,1;UBERON:0004913,3.84e-07,1;UBERON:0003703,3.84e-07,1;UBERON:0001174,3.84e-07,1;UBERON:0004914,3.84e-07,1;UBERON:0001708,4.63e-07,4;UBERON:0008895,4.63e-07,4;UBERON:0001911,8.69e-07,4;UBERON:0005333,8.69e-07,4;UBERON:0008425,8.69e-07,4;UBERON:0005311,8.69e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.655324116390517,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,2.31913023795956,4.36393792945335,1.72082757233402,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,2.08525542276389,1.1240175325762,20.5079103719727,1.94435734832912,0,0,0,0.231860809950154,0,0,0,0.380508304469197,0,0,0,0,0,1.87467667973554,3.52762469217605,0.850650583454319,1.61205340865127,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0.519254429183621,0,0,11.8298817478938,7.73480307061529,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,8.59481559877086,3.2672311452068,8.42243902464255,2.52894452138875,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59799704358883,0,1.08890984861323,0,2.15252686335615,5.05414427002877,9.75546337780687,3.67557440331135,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,3.79796516150449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.587954384486266,0.174118413160805,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0.308801447160972,0,0.530067437837643,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,1.18284868973636,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,2.07216164163037,0.3414369541879,0,0,0,0,0,1.60374807980835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0.404234377916439,0,0,0,0,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:183213340..183213356,+ | |||
}} |
Revision as of 22:41, 10 January 2014
Short description: | p@chr1:183213340..183213356, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183213340..183213356, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 1.81e-20 | 5 |
gingival epithelium | 4.52e-19 | 3 |
transitional epithelium | 4.35e-17 | 6 |
endoderm-derived structure | 3.85e-11 | 160 |
endoderm | 3.85e-11 | 160 |
presumptive endoderm | 3.85e-11 | 160 |
respiratory system | 1.33e-09 | 74 |
endo-epithelium | 1.51e-08 | 82 |
surface structure | 7.05e-08 | 99 |
mouth mucosa | 1.06e-07 | 13 |
epithelium of mucosa | 1.84e-07 | 8 |
gingiva | 1.84e-07 | 8 |
lower lobe of right lung | 3.62e-07 | 1 |
right lung lobe | 3.62e-07 | 1 |
lower lobe of lung | 3.62e-07 | 1 |
lobe of lung | 3.62e-07 | 1 |
right lung | 3.62e-07 | 1 |
hepatopancreatic ampulla | 3.84e-07 | 1 |
extrahepatic bile duct | 3.84e-07 | 1 |
common bile duct | 3.84e-07 | 1 |
duodenal papilla | 3.84e-07 | 1 |
jaw skeleton | 4.63e-07 | 4 |
splanchnocranium | 4.63e-07 | 4 |
mammary gland | 8.69e-07 | 4 |
mammary bud | 8.69e-07 | 4 |
mammary ridge | 8.69e-07 | 4 |
mammary placode | 8.69e-07 | 4 |