FFCP PHASE1:Hg19::chr20:33880219..33880234,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16121 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BQN1 | |||
|association_with_transcript=0bp_to_NM_178468,uc002xcb.1,uc010zux.1_5end | |||
|coexpression_cluster_id=C1451 | |||
|description=CAGE_peak_1_at_FAM83C_5end | |||
|id=chr20:33880219..33880234,- | |||
|ontology_enrichment_celltype=CL:0002159!2.78e-18!13;CL:0000244!3.38e-15!4;CL:0000731!3.38e-15!4;CL:0002621!1.20e-12!3;CL:0000362!2.01e-12!8;CL:0000240!1.18e-10!6;CL:0000311!1.18e-10!6;CL:0000079!1.18e-10!6;CL:0000237!1.18e-10!6;CL:0000036!1.18e-10!6;CL:0000357!1.18e-10!6;CL:0000114!1.18e-10!6;CL:0002077!7.59e-10!33;CL:0002076!1.10e-09!43;CL:0000317!2.72e-09!2;CL:1000448!2.72e-09!2;CL:0002308!2.72e-09!2;CL:0002140!2.72e-09!2;CL:0000575!2.94e-09!2;CL:0001014!7.22e-09!2;CL:0001016!7.22e-09!2;CL:0002251!6.60e-08!21;CL:0000312!1.13e-07!5;CL:0000622!1.24e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002159;6.45e-26;14!CL:0002621;4.02e-23;3!CL:0000362;6.05e-21;9!CL:0000240;7.31e-20;6!CL:0000311;7.31e-20;6!CL:0000079;7.31e-20;6!CL:0000237;7.31e-20;6!CL:0000317;1.32e-16;2!CL:1000448;1.32e-16;2!CL:0002308;1.32e-16;2!CL:0002140;1.32e-16;2!CL:0000575;1.43e-16;2!CL:0000312;5.11e-14;5!CL:0002077;5.01e-12;34!CL:0002251;4.48e-09;20!CL:0002252;1.32e-08;1!CL:0002336;1.91e-08;1!CL:0002261;1.91e-08;1!CL:0002170;1.91e-08;1!CL:0000244;3.16e-08;4!CL:0000731;3.16e-08;4!CL:0000622;3.71e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,6.57e-26,14;CL:0002621,3.59e-23,3;CL:0000362,6.06e-21,9;CL:0000240,7.13e-20,6;CL:0000311,7.13e-20,6;CL:0000079,7.13e-20,6;CL:0000237,7.13e-20,6;CL:0000036,7.13e-20,6;CL:0000357,7.13e-20,6;CL:0000114,7.13e-20,6;CL:0000317,1.27e-16,2;CL:1000448,1.27e-16,2;CL:0002308,1.27e-16,2;CL:0002140,1.27e-16,2;CL:0000575,1.48e-16,2;CL:0000312,5.23e-14,5;CL:0002077,4.03e-13,34;CL:0002251,4.29e-09,20;CL:0002252,1.32e-08,1;CL:0002336,1.78e-08,1;CL:0002261,1.78e-08,1;CL:0002170,1.78e-08,1;CL:0000244,2.88e-08,4;CL:0000731,2.88e-08,4;CL:0000622,3.66e-07,5;CL:0000221,7.80e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;7.31e-20;6!CL:0000114;7.31e-20;6!UBERON:0009143;4.89e-09;1!UBERON:0000358;1.32e-08;1!UBERON:0004874;1.91e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.20e-12!3;UBERON:0003102!1.43e-12!95;UBERON:0000365!3.55e-12!5;UBERON:0000166!1.93e-10!21;UBERON:0005910!3.71e-10!6;UBERON:0001003!9.50e-10!14;UBERON:0007376!9.50e-10!14;UBERON:0007383!9.50e-10!14;UBERON:0000165!1.80e-09!28;UBERON:0000930!1.80e-09!28;UBERON:0002419!2.72e-09!2;UBERON:0007771!2.72e-09!2;UBERON:0003297!2.72e-09!2;UBERON:0001821!2.72e-09!2;UBERON:0003487!2.72e-09!2;UBERON:0001820!2.72e-09!2;UBERON:0005089!2.72e-09!2;UBERON:0005088!2.72e-09!2;UBERON:0000161!8.30e-09!35;UBERON:0003127!2.61e-08!2;UBERON:0001444!1.73e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.02e-23;3!UBERON:0010371;3.48e-18;31!UBERON:0001003;9.95e-18;15!UBERON:0007376;9.95e-18;15!UBERON:0002419;1.32e-16;2!UBERON:0007771;1.32e-16;2!UBERON:0003297;1.32e-16;2!UBERON:0001821;1.32e-16;2!UBERON:0003487;1.32e-16;2!UBERON:0001820;1.32e-16;2!UBERON:0000486;2.55e-15;12!UBERON:0000165;3.26e-12;28!UBERON:0001723;5.98e-11;3!UBERON:0001033;5.98e-11;3!UBERON:0001043;6.29e-11;3!UBERON:0003929;3.12e-10;7!UBERON:0003729;2.55e-09;13!UBERON:0000344;4.00e-09;20!UBERON:0003350;5.17e-09;8!UBERON:0001828;5.17e-09;8!UBERON:0007029;6.16e-09;1!UBERON:0002372;8.05e-09;1!UBERON:0001961;8.05e-09;1!UBERON:0001744;8.05e-09;1!UBERON:0001042;8.05e-09;1!UBERON:0001735;8.05e-09;1!UBERON:0000964;9.94e-09;4!UBERON:0010409;9.94e-09;4!UBERON:0005795;1.91e-08;1!UBERON:0000989;1.91e-08;1!UBERON:0008811;1.91e-08;1!UBERON:0007811;5.95e-08;52!UBERON:0000033;4.08e-07;50!UBERON:0003102;4.47e-07;50!UBERON:0001555;4.79e-07;54!UBERON:0000153;7.98e-07;54!UBERON:0001444;9.00e-07;48!UBERON:0000365;9.59e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.59e-23,3;UBERON:0001003,1.02e-17,15;UBERON:0007376,1.02e-17,15;UBERON:0007383,1.02e-17,15;UBERON:0002419,1.27e-16,2;UBERON:0007771,1.27e-16,2;UBERON:0003297,1.27e-16,2;UBERON:0001821,1.27e-16,2;UBERON:0003487,1.27e-16,2;UBERON:0001820,1.27e-16,2;UBERON:0005089,1.27e-16,2;UBERON:0005088,1.27e-16,2;UBERON:0003102,3.00e-14,99;UBERON:0000166,8.50e-12,22;UBERON:0000165,8.70e-12,29;UBERON:0000930,8.70e-12,29;UBERON:0001444,5.03e-11,49;UBERON:0001043,6.29e-11,3;UBERON:0001723,6.29e-11,3;UBERON:0001033,6.29e-11,3;UBERON:0009143,6.29e-11,3;UBERON:0010056,6.29e-11,3;UBERON:0000153,1.96e-10,62;UBERON:0007811,1.96e-10,62;UBERON:0000033,1.79e-09,56;UBERON:0003729,2.42e-09,13;UBERON:0000344,3.72e-09,20;UBERON:0003350,4.96e-09,8;UBERON:0001828,4.96e-09,8;UBERON:0007029,6.65e-09,1;UBERON:0002372,7.18e-09,1;UBERON:0001961,7.18e-09,1;UBERON:0001744,7.18e-09,1;UBERON:0001735,7.18e-09,1;UBERON:0000964,1.01e-08,4;UBERON:0010409,1.01e-08,4;UBERON:0004348,1.01e-08,4;UBERON:0005427,1.01e-08,4;UBERON:0000989,1.91e-08,1;UBERON:0008811,1.91e-08,1;UBERON:0006258,1.91e-08,1;UBERON:0005876,1.91e-08,1;UBERON:0004874,1.91e-08,1;UBERON:0001042,2.81e-07,10;UBERON:0009145,2.81e-07,10;UBERON:0000161,5.24e-07,36;UBERON:0004121,6.77e-07,171;UBERON:0000924,6.77e-07,171;UBERON:0006601,6.77e-07,171;UBERON:0010371,8.06e-07,104;UBERON:0000365,8.92e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,12.3860398019464,21.1347132387125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95739071387869,3.54569956768085,6.59650569394709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4385245451418,2.24803506515239,4.12168786887686,1.66659201285353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6338418359158,24.0522291033513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,1.68471475667626,4.43430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,3.53971189117467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5718027972377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,32.4996820914339,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11903606175556,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31424290976881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,4.26467963801962,0,0,0,0,0,0,11.321270890642,2.05339980651169,4.78199576403571,2.00822175099494,0.332660356546013,0,0,0,0,2.34640942403454,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p1@FAM83C | |||
}} |
Revision as of 10:56, 21 January 2014
Short description: | p1@FAM83C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM83C_5end |
Coexpression cluster: | C1451_immature_Sebocyte_squamous_Keratinocyte_Corneal_Small_Urothelial |
Association with transcript: | 0bp_to_NM_178468, uc002xcb.1, uc010zux.1_5end |
EntrezGene: | FAM83C |
HGNC: | 16121 |
UniProt: | Q9BQN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 6.57e-26 | 14 |
gingival epithelial cell | 3.59e-23 | 3 |
epidermal cell | 6.06e-21 | 9 |
stratified squamous epithelial cell | 7.13e-20 | 6 |
keratin accumulating cell | 7.13e-20 | 6 |
stratified epithelial cell | 7.13e-20 | 6 |
keratinizing barrier epithelial cell | 7.13e-20 | 6 |
epithelial fate stem cell | 7.13e-20 | 6 |
stratified epithelial stem cell | 7.13e-20 | 6 |
surface ectodermal cell | 7.13e-20 | 6 |
sebum secreting cell | 1.27e-16 | 2 |
epithelial cell of sweat gland | 1.27e-16 | 2 |
epithelial cell of skin gland | 1.27e-16 | 2 |
acinar cell of sebaceous gland | 1.27e-16 | 2 |
corneal epithelial cell | 1.48e-16 | 2 |
keratinocyte | 5.23e-14 | 5 |
ecto-epithelial cell | 4.03e-13 | 34 |
epithelial cell of alimentary canal | 4.29e-09 | 20 |
epithelial cell of esophagus | 1.32e-08 | 1 |
buccal mucosa cell | 1.78e-08 | 1 |
endothelial cell of viscerocranial mucosa | 1.78e-08 | 1 |
keratinized cell of the oral mucosa | 1.78e-08 | 1 |
transitional epithelial cell | 2.88e-08 | 4 |
urothelial cell | 2.88e-08 | 4 |
acinar cell | 3.66e-07 | 5 |
ectodermal cell | 7.80e-07 | 72 |