FFCP PHASE1:Hg19::chr20:57594454..57594491,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81027 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16257 | |||
|TSSclassifier=not | |||
|UniProt=Q9H4B7 | |||
|association_with_transcript=145bp_to_ENST00000217133,NM_030773,uc002yak.2_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_TUBB1_5end | |||
|id=chr20:57594454..57594491,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.69e-27!172;CL:0000566!1.69e-27!172;CL:0000988!1.78e-24!182;CL:0002032!1.35e-23!165;CL:0000837!1.35e-23!165;CL:0000738!5.78e-22!140;CL:0002087!3.12e-18!119;CL:0000763!4.40e-18!112;CL:0000049!4.40e-18!112;CL:0002057!5.24e-17!42;CL:0002031!9.13e-16!124;CL:0000766!1.12e-15!76;CL:0000860!3.29e-15!45;CL:0002194!2.28e-11!63;CL:0000576!2.28e-11!63;CL:0000040!2.28e-11!63;CL:0000559!2.28e-11!63;CL:0000839!3.47e-11!70;CL:0000094!3.65e-11!8;CL:0002009!1.02e-10!65;CL:0000557!5.19e-09!71;CL:0000081!1.80e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000094;9.17e-21;8!CL:0000081;1.20e-14;11!CL:0000860;9.13e-11;33!CL:0002057;9.13e-11;33!CL:0000576;1.93e-09;48!CL:0000775;5.36e-09;3!CL:0000226;6.02e-09;3!CL:0000842;6.02e-09;3!CL:0000767;1.06e-08;3!CL:0000763;1.50e-08;100!CL:0000236;4.50e-08;13!CL:0000473;4.24e-07;39!CL:0000234;4.24e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.91e-26,168;CL:0000988,8.84e-24,177;CL:0000763,1.49e-23,108;CL:0000049,1.49e-23,108;CL:0002032,3.16e-23,161;CL:0000837,3.16e-23,161;CL:0000094,8.77e-21,8;CL:0000738,2.15e-17,136;CL:0000766,1.55e-16,72;CL:0000081,1.16e-14,11;CL:0002087,4.40e-12,115;CL:0000860,2.19e-11,42;CL:0002057,2.19e-11,42;CL:0002031,3.04e-10,120;CL:0000839,9.53e-10,66;CL:0000473,1.82e-09,48;CL:0000234,1.82e-09,48;CL:0000775,5.37e-09,3;CL:0000226,5.96e-09,3;CL:0000842,5.96e-09,3;CL:0002194,7.44e-09,59;CL:0000576,7.44e-09,59;CL:0000040,7.44e-09,59;CL:0000559,7.44e-09,59;CL:0000767,1.03e-08,3;CL:0002009,1.98e-08,61;CL:0000236,1.35e-07,14;CL:0000557,2.59e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.74e-08;7!CL:0002057;3.38e-08;42!CL:0000049;8.20e-08;108 | |||
|ontology_enrichment_disease=DOID:1036!1.25e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.82e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.76e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.44e-24!115;UBERON:0002390!1.67e-15!102;UBERON:0003061!1.67e-15!102;UBERON:0002193!2.09e-13!112;UBERON:0000178!1.80e-12!15;UBERON:0000179!1.80e-12!15;UBERON:0000463!1.80e-12!15;UBERON:0002371!1.21e-07!80;UBERON:0001474!5.83e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.38e-25;15!UBERON:0000179;7.38e-25;15!UBERON:0000463;7.38e-25;15!UBERON:0002390;3.65e-13;32!UBERON:0002193;6.58e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.36e-25,15;UBERON:0000179,7.36e-25,15;UBERON:0000463,7.36e-25,15;UBERON:0002390,3.03e-18,98;UBERON:0003061,3.03e-18,98;UBERON:0002193,9.40e-16,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.4501632839262,41.8374043925962,4.79929982279836,0,0,0,0,0,0.880801318004542,6.09394949385065,1.80490002723128,0.434021741431704,2.91090116511902,0.32389366601898,1.03030227053675,1.59938062657521,0,0.485168122375632,1.62700325833979,1.23350366406548,1.54853185447552,0.28769239232215,0.512321413058201,1.41889337933151,1.03423704220986,0.645484683583826,0,1.69418105588344,1.63743690034707,0.449446968890169,2.44867113896722,0.320929027076094,0,0.659702600373432,0.398927315243264,0,2.32167390902867,0.56738522469114,1.24564449799115,1.25624332628372,2.08593167368081,1.08594422352558,0,1.47311054395026,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,1.75996244461323,8.7382177801941,0.889509253863555,2.56038133539904,2.00197993518006,23.5648500381338,1.98313461835459,0,1.70763890732835,0.587237189370939,0,46.2599650026591,34.1910223418737,3.16060901730092,0.590129310341499,0.786021525498329,0,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.637130828648193,0.651083453856419,0,0.451725357233318,0.383959833463255,1.24930726552346,4.2619905367923,0,0.80642697289893,1.33720097891754,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.392937226493138,0,0,0,0,0,0.953962497221368,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,46.533631697799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,21.7212036944683,71.798750208966,95.7299836037242,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,49.0040221911243,35.5928431350718,27.9626201445024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6267444573878,34.7709149863118,0,0,0,2.26690225624989,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,828.661945876133,743.227365342389,571.356128735685,346.865465066541,322.508022099576,682.842396685931,700.960805535073,680.501401260484,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34087408674291,0,26.7751121691223,0,4.22961015263549,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.0986434056369336,423.885073454083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.470940769185074,5.65119718460532,10.1518047277731,13.1361897992885,8.22325776181629,34.3454256230775,3.65554131654871,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0.199679000498991,0.858452096273142,6.24880080837243,2.14987111957524,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.157611414598396,1.20645552710496,0,0,0,0.714695326373367,0,0,0,0,0,0,5.99275401470174,0,0,0.58620893471233,14.5757577803443,0.129282956361551,0.13223260174269,0,0,6.0868825163586,11.1615056620763,1.65695622138878,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,1.07140367175657,0,1.21393120847326,0,1.5966426629275,0,0,0.339848664884159,0,0,0,0.235479278551542,0.471346769748006,0.280272163313789,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,4.6392577253528,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0.437119121007915,0,0,0,0.196308467114945,0.594092800654172,0.8453114551668,0,14.6614912048572,18.6283296243638,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.303114792872958,0.535928260312357,0.829169439458779,0,2.34557380091079,0.714193294391221,0,0.558672428662721,0,0.318235791390825,0.606351566874658,0.217716747896961,0,0.202056159043763,0.143444410785353,0.665320713092027,0,0,0,0,0,0,1.22068853494722,1.33151354837103,1.20764276154616,0 | |||
|short_description=p1@TUBB1 | |||
}} |
Revision as of 12:31, 21 January 2014
Short description: | p1@TUBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUBB1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 145bp_to_ENST00000217133, NM_030773, uc002yak.2_5end |
EntrezGene: | TUBB1 |
HGNC: | 16257 |
UniProt: | Q9H4B7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.91e-26 | 168 |
hematopoietic cell | 8.84e-24 | 177 |
myeloid cell | 1.49e-23 | 108 |
common myeloid progenitor | 1.49e-23 | 108 |
hematopoietic oligopotent progenitor cell | 3.16e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.16e-23 | 161 |
granulocyte | 8.77e-21 | 8 |
leukocyte | 2.15e-17 | 136 |
myeloid leukocyte | 1.55e-16 | 72 |
blood cell | 1.16e-14 | 11 |
nongranular leukocyte | 4.40e-12 | 115 |
classical monocyte | 2.19e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-11 | 42 |
hematopoietic lineage restricted progenitor cell | 3.04e-10 | 120 |
myeloid lineage restricted progenitor cell | 9.53e-10 | 66 |
defensive cell | 1.82e-09 | 48 |
phagocyte | 1.82e-09 | 48 |
neutrophil | 5.37e-09 | 3 |
single nucleate cell | 5.96e-09 | 3 |
mononuclear cell | 5.96e-09 | 3 |
monopoietic cell | 7.44e-09 | 59 |
monocyte | 7.44e-09 | 59 |
monoblast | 7.44e-09 | 59 |
promonocyte | 7.44e-09 | 59 |
basophil | 1.03e-08 | 3 |
macrophage dendritic cell progenitor | 1.98e-08 | 61 |
B cell | 1.35e-07 | 14 |
granulocyte monocyte progenitor cell | 2.59e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
blood | 7.36e-25 | 15 |
haemolymphatic fluid | 7.36e-25 | 15 |
organism substance | 7.36e-25 | 15 |
hematopoietic system | 3.03e-18 | 98 |
blood island | 3.03e-18 | 98 |
hemolymphoid system | 9.40e-16 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.76e-11 | 8 |