FFCP PHASE1:Hg19::chr3:127391769..127391861,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80325 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18275 | |||
|TSSclassifier=strong | |||
|UniProt=Q969K4,C9JBQ0,F2Z3F5 | |||
|association_with_transcript=0bp_to_ENST00000232744,ENST00000361019,ENST00000393363,ENST00000453791,ENST00000466612,ENST00000475042,ENST00000475265,ENST00000483857,ENST00000493365,NM_032548,NM_172027,NR_033429,uc003ejr.2,uc003ejs.2,uc003ejt.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ABTB1_5end | |||
|id=chr3:127391769..127391861,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.31e-22!140;CL:0002057!1.78e-19!42;CL:0000766!2.05e-18!76;CL:0002087!2.30e-18!119;CL:0000860!9.40e-18!45;CL:0002031!1.23e-17!124;CL:0000839!6.54e-15!70;CL:0002194!9.97e-15!63;CL:0000576!9.97e-15!63;CL:0000040!9.97e-15!63;CL:0000559!9.97e-15!63;CL:0002009!7.21e-14!65;CL:0000557!1.19e-13!71;CL:0000037!1.51e-12!172;CL:0000566!1.51e-12!172;CL:0000988!2.08e-12!182;CL:0002032!1.52e-11!165;CL:0000837!1.52e-11!165;CL:0000791!6.93e-10!18;CL:0000789!6.93e-10!18;CL:0002420!6.93e-10!18;CL:0002419!6.93e-10!18;CL:0000790!6.93e-10!18;CL:0000763!8.05e-08!112;CL:0000049!8.05e-08!112;CL:0000625!6.18e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.92e-13;33!CL:0002057;2.92e-13;33!CL:0000576;1.47e-11;48!CL:0000473;6.90e-11;39!CL:0000234;6.90e-11;39!CL:0000791;6.29e-10;18!CL:0000789;6.29e-10;18!CL:0002419;6.29e-10;18!CL:0000766;1.24e-09;69!CL:0000625;5.94e-07;11!CL:0002087;7.16e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.94e-23,136;CL:0000766,1.42e-19,72;CL:0000860,1.78e-19,42;CL:0002057,1.78e-19,42;CL:0002087,4.05e-19,115;CL:0000473,7.86e-19,48;CL:0000234,7.86e-19,48;CL:0002031,2.46e-18,120;CL:0000839,6.12e-16,66;CL:0002194,7.49e-16,59;CL:0000576,7.49e-16,59;CL:0000040,7.49e-16,59;CL:0000559,7.49e-16,59;CL:0002009,6.72e-15,61;CL:0000557,1.38e-14,67;CL:0000988,4.15e-13,177;CL:0000037,6.02e-13,168;CL:0002032,6.25e-12,161;CL:0000837,6.25e-12,161;CL:0000791,6.93e-10,18;CL:0000789,6.93e-10,18;CL:0002420,6.93e-10,18;CL:0002419,6.93e-10,18;CL:0000790,6.93e-10,18;CL:0000763,3.34e-08,108;CL:0000049,3.34e-08,108;CL:0000625,6.18e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.78e-14;42!CL:0000790;6.29e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.72e-30!115;UBERON:0002390!4.11e-16!102;UBERON:0003061!4.11e-16!102;UBERON:0002193!3.89e-14!112;UBERON:0002371!1.22e-10!80;UBERON:0001049!1.57e-09!57;UBERON:0005068!1.57e-09!57;UBERON:0006241!1.57e-09!57;UBERON:0007135!1.57e-09!57;UBERON:0001474!2.63e-09!86;UBERON:0002616!1.15e-08!59;UBERON:0003080!9.45e-08!42;UBERON:0002780!1.44e-07!41;UBERON:0001890!1.44e-07!41;UBERON:0006240!1.44e-07!41;UBERON:0004765!1.92e-07!101;UBERON:0001434!1.92e-07!101;UBERON:0003081!2.65e-07!216;UBERON:0002405!2.83e-07!115;UBERON:0001893!7.91e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.14e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.59e-29,114;UBERON:0002390,6.91e-17,98;UBERON:0003061,6.91e-17,98;UBERON:0002193,9.11e-15,108;UBERON:0002371,2.67e-11,76;UBERON:0002405,9.55e-11,93;UBERON:0001474,7.50e-10,82;UBERON:0001049,2.39e-09,56;UBERON:0005068,2.39e-09,56;UBERON:0006241,2.39e-09,56;UBERON:0007135,2.39e-09,56;UBERON:0000073,3.03e-09,53;UBERON:0002616,3.03e-09,53;UBERON:0004765,4.17e-09,90;UBERON:0001434,5.42e-08,100;UBERON:0002780,1.44e-07,41;UBERON:0001890,1.44e-07,41;UBERON:0003080,1.44e-07,41;UBERON:0006240,1.44e-07,41;UBERON:0003081,1.77e-07,203;UBERON:0001893,7.91e-07,34 | |||
|phase1_expression=13.6258784452917,11.7755288140041,10.9944435194858,24.0175916047513,8.93922188854576,15.7020934338066,15.1979926900986,3.15859936713415,9.14149698699435,5.16041266653169,18.8406315352555,6.55324116390517,4.74780560811216,14.2331305904054,14.9128819077562,9.41255205032485,13.2592796165275,13.1455816269727,10.2465887746006,8.61847406537515,13.2600449308764,8.14982275843028,4.57977579409691,3.28498620174922,2.13422487311165,1.06978768047132,1.31360943119913,1.18066171970519,42.0899776228327,19.9591287010551,34.9884438694332,3.67768489791571,5.72291245678675,9.98335827450327,2.55641761914995,2.13253848731132,12.6248188913984,37.1176923716358,45.1225006807819,43.8361958846021,38.0656306207871,29.4743236077271,23.1818010870768,54.6697377811163,43.0778575805243,49.4871484823145,36.7237878310982,27.5482484974623,25.7056287842936,27.6184696629264,29.2023205443175,30.2697254257389,28.6138915011393,26.4648720269369,58.233389235567,34.6365904758393,28.1093334559581,33.4837991823176,29.6901375599776,20.2185287057939,28.1308335351578,29.3567657166177,33.3104308228125,33.6717552920828,31.3425977718871,20.9932533135722,29.8954679517876,28.6423478392687,33.8963896973131,35.401781686934,23.005181100068,30.1987661509803,30.3803891943249,43.0960784076361,55.9149308908065,49.06012304896,57.5122591470055,77.1909229205342,35.6810802467518,43.606949792411,60.2717531913243,46.396695056217,33.4392864476513,48.6063364023297,38.2488979161329,41.8195618115177,32.031678962881,37.9336610369959,37.0185128759523,39.1162039359499,42.1217597140992,32.2980454154016,30.5818582500183,15.8605594294831,13.4522055115569,11.0621315605532,31.2768534480995,34.9779578846757,41.9427057958999,35.4435370228238,76.5917326588937,82.8533660035783,97.4133642039557,37.6567344271887,76.3029300359828,67.5678378480044,70.138200715139,29.8452774960823,29.3934125485325,22.3635550261,25.9769016718697,26.0822777161547,51.7520105435591,54.8458697583912,68.9934457112847,24.021580651884,48.669002687444,46.7333325856377,35.4227568827304,52.8818587778001,44.9247583160929,47.5226022224187,45.0219606042541,39.163903013252,36.2299107001803,50.6703319374196,47.6254238214207,25.2008429030916,31.0230627108869,31.716544450333,21.9426179682566,15.4261197731836,6.26526553033299,8.67453965722959,13.0347856765331,17.0918892373772,2.3858578411533,14.1124112387764,7.18464610446916,5.09977614163897,4.65524364173568,19.0574554849172,8.37879163072847,5.93255108455087,10.3855165969499,10.9701734498538,9.97184703891489,22.1796280603968,15.4438625910635,22.2874500797739,4.37277296206751,5.16140757063675,4.85996702250632,5.6530794192401,6.71199097935849,5.50236083880135,3.13492449805216,2.84258435086262,1.42306505074684,3.3472061276467,15.7103433672567,5.32190474002959,16.3521578557274,3.30896772311282,7.29127753093584,3.66128885964727,3.59246996201872,2.81528701208306,9.19899824795299,6.6448596169769,6.77846452542507,528.439473918614,515.747751317273,9.15797509499322,10.4364109856017,7.34456967654563,18.0076485905978,21.2259099354122,6.73869926176878,8.41016400213461,3.20246987189115,12.5800449692752,4.66816553099649,4.58016285036939,3.92308567472301,14.3789556262685,18.43762958336,2.57753575017176,6.55536161343673,5.13424639390004,4.33401173600223,3.40560046066918,5.34180716414834,4.6348766211742,5.71631679513701,6.1417158655884,6.40619843289746,9.50402285825643,10.3852110296994,12.7422590671324,16.5282172617735,5.89176398839232,4.50426671539071,3.87889761677856,6.58466431321257,8.27517048657353,11.7185685947146,3.97012641060074,15.9656775763087,13.0270007179326,4.23863802319124,20.7062856298238,7.83199222212136,32.2050675057036,10.9808945235638,12.658224918095,7.89239741805709,18.6800992940645,7.64014158731085,16.0029596250624,12.0703261455649,5.54136540252021,7.46066606166146,12.368694602451,8.45512973831587,5.73609190778008,1.95157929807353,0.927708378250397,2.78865462886844,3.21349270547648,2.52320850875628,1.09493207722749,14.0804579096834,29.5890831568727,9.66944449467364,21.360924689471,11.5500717067134,5.44211280183282,3.54027849164014,3.61516544825223,6.61763836394364,4.57546832594053,4.74541238222193,6.33707148352773,5.101758093259,5.38646019724947,7.38155454624648,5.60967095213783,8.6430542379594,17.641045366265,6.33775174109154,7.86261773342101,15.3605375737165,4.85609409356116,3.07471096357784,9.43622956641891,7.24351883696929,13.4882103909143,14.1745851100399,6.48119116109707,3.9096996637239,8.31947828223663,5.77325368101093,6.72396348855446,2.58299127318808,6.78522304477047,6.48179717607255,5.13686211033415,11.8530659693891,8.58486162094873,19.4511434809044,5.38209809820247,10.404181360211,4.68669169933885,5.54341023056236,3.82792762554443,1.61205340865127,3.77824120068151,13.8017764499476,2.46331618947972,14.5279916121823,17.2082335898841,17.7267542702863,22.2186682830429,8.06423257510547,17.1894791501225,19.926966025708,13.6857956818164,6.78661451841935,10.2116639666932,13.7196687662678,8.8583556632835,6.10344096366592,7.26049029627405,4.52451005152222,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| |||
|short_description=p1@ABTB1 | |||
}} |
Revision as of 21:09, 21 January 2014
Short description: | p1@ABTB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABTB1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000232744, ENST00000361019, ENST00000393363, ENST00000453791, ENST00000466612, ENST00000475042, ENST00000475265, ENST00000483857, ENST00000493365, NM_032548, NM_172027, NR_033429, uc003ejr.2, uc003ejs.2, uc003ejt.2_5end |
EntrezGene: | ABTB1 |
HGNC: | 18275 |
UniProt: | Q969K4C9JBQ0F2Z3F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.94e-23 | 136 |
myeloid leukocyte | 1.42e-19 | 72 |
classical monocyte | 1.78e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-19 | 42 |
nongranular leukocyte | 4.05e-19 | 115 |
defensive cell | 7.86e-19 | 48 |
phagocyte | 7.86e-19 | 48 |
hematopoietic lineage restricted progenitor cell | 2.46e-18 | 120 |
myeloid lineage restricted progenitor cell | 6.12e-16 | 66 |
monopoietic cell | 7.49e-16 | 59 |
monocyte | 7.49e-16 | 59 |
monoblast | 7.49e-16 | 59 |
promonocyte | 7.49e-16 | 59 |
macrophage dendritic cell progenitor | 6.72e-15 | 61 |
granulocyte monocyte progenitor cell | 1.38e-14 | 67 |
hematopoietic cell | 4.15e-13 | 177 |
hematopoietic stem cell | 6.02e-13 | 168 |
hematopoietic oligopotent progenitor cell | 6.25e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.25e-12 | 161 |
mature alpha-beta T cell | 6.93e-10 | 18 |
alpha-beta T cell | 6.93e-10 | 18 |
immature T cell | 6.93e-10 | 18 |
mature T cell | 6.93e-10 | 18 |
immature alpha-beta T cell | 6.93e-10 | 18 |
myeloid cell | 3.34e-08 | 108 |
common myeloid progenitor | 3.34e-08 | 108 |
CD8-positive, alpha-beta T cell | 6.18e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.59e-29 | 114 |
hematopoietic system | 6.91e-17 | 98 |
blood island | 6.91e-17 | 98 |
hemolymphoid system | 9.11e-15 | 108 |
bone marrow | 2.67e-11 | 76 |
immune system | 9.55e-11 | 93 |
bone element | 7.50e-10 | 82 |
neural tube | 2.39e-09 | 56 |
neural rod | 2.39e-09 | 56 |
future spinal cord | 2.39e-09 | 56 |
neural keel | 2.39e-09 | 56 |
regional part of nervous system | 3.03e-09 | 53 |
regional part of brain | 3.03e-09 | 53 |
skeletal element | 4.17e-09 | 90 |
skeletal system | 5.42e-08 | 100 |
regional part of forebrain | 1.44e-07 | 41 |
forebrain | 1.44e-07 | 41 |
anterior neural tube | 1.44e-07 | 41 |
future forebrain | 1.44e-07 | 41 |
lateral plate mesoderm | 1.77e-07 | 203 |
telencephalon | 7.91e-07 | 34 |