FFCP PHASE1:Mm9::chr19:11590963..11590987,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=69774|HGNC=|MCL_coexpression_id=40|UniProt=Q99N09|association_with_transcript=-14bp_to_ENSMUST00000163078_5end|description=CAGE_peak_3_at_Ms4a6b_5end|id=chr19:11590963..11590987,+|ontology_enrichment_celltype=CL:0000791!2.54e-10!9;CL:0000789!2.54e-10!9;CL:0002420!2.54e-10!9;CL:0002419!2.54e-10!9;CL:0000790!2.54e-10!9;CL:0000624!2.76e-09!8;CL:0000838!3.67e-08!12;CL:0000084!7.70e-08!11;CL:0000827!7.70e-08!11;CL:0000738!1.51e-07!17;CL:0002087!1.51e-07!17;CL:0000893!2.60e-07!6;CL:0002489!2.60e-07!6;CL:0000898!2.60e-07!6;CL:0000809!2.60e-07!6;CL:0000810!2.60e-07!6;CL:0000895!2.60e-07!6;CL:0000808!2.60e-07!6;CL:0000894!2.60e-07!6;CL:0000806!2.60e-07!6;CL:0000807!2.60e-07!6;CL:0000805!2.60e-07!6;CL:0002425!2.60e-07!6;CL:0002436!2.60e-07!6;CL:0002427!2.60e-07!6;CL:0002428!2.60e-07!6;CL:0002429!2.60e-07!6;CL:0002433!2.60e-07!6;CL:0002431!2.60e-07!6;CL:0002432!2.60e-07!6;CL:0000542!2.89e-07!13;CL:0000051!2.89e-07!13|ontology_enrichment_celltype_v019_2=CL:0000791,3.08e-34,9;CL:0000789,3.08e-34,9;CL:0002420,3.08e-34,9;CL:0002419,3.08e-34,9;CL:0000790,3.08e-34,9;CL:0000738,1.02e-29,17;CL:0002087,1.02e-29,17;CL:0000624,2.56e-28,8;CL:0000084,6.04e-28,11;CL:0000827,6.04e-28,11;CL:0000838,1.39e-25,12;CL:0002031,1.54e-24,25;CL:0000542,1.39e-23,13;CL:0000051,1.39e-23,13;CL:0000988,5.92e-19,32;CL:0002032,5.92e-19,32;CL:0000037,5.92e-19,32;CL:0000837,5.92e-19,32;CL:0000893,2.52e-17,6;CL:0002489,2.52e-17,6;CL:0000898,2.52e-17,6;CL:0000809,2.52e-17,6;CL:0000810,2.52e-17,6;CL:0000895,2.52e-17,6;CL:0000808,2.52e-17,6;CL:0000894,2.52e-17,6;CL:0000806,2.52e-17,6;CL:0000807,2.52e-17,6;CL:0000805,2.52e-17,6;CL:0002425,2.52e-17,6;CL:0002436,2.52e-17,6;CL:0002427,2.52e-17,6;CL:0002428,2.52e-17,6;CL:0002429,2.52e-17,6;CL:0002433,2.52e-17,6;CL:0002431,2.52e-17,6;CL:0002432,2.52e-17,6;CL:0002476,3.90e-14,2;CL:0002320,7.33e-13,46;CL:0000134,7.33e-13,46;CL:0000219,8.65e-11,54;CL:0000625,6.29e-08,1;CL:0000815,1.33e-07,1;CL:0000792,1.33e-07,1;CL:0002194,1.66e-07,4;CL:0000766,1.66e-07,4;CL:0000234,1.66e-07,4;CL:0000576,1.66e-07,4;CL:0000235,1.66e-07,4;CL:0000864,1.66e-07,4;CL:0002009,1.66e-07,4;CL:0000040,1.66e-07,4;CL:0000559,1.66e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.77e-07!45;UBERON:0003061!5.77e-07!45;UBERON:0004177!5.90e-07!29;UBERON:0002193!6.07e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.33e-13,46;UBERON:0002193,8.76e-08,48;UBERON:0002405,8.76e-08,48;UBERON:0000029,9.86e-08,1;UBERON:0001097,9.86e-08,1;UBERON:0003968,9.86e-08,1;UBERON:0001467,9.86e-08,1|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.93684985162364,1.40788722151667,1.17032263160997,0.856089841127525,0.957265907944037,11.9840510951844,4.80812213304486,0,0,0,1.26184866143295,0.685572168028694,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,6.04968838456435,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0,0,0.608930956624282,0.230615497256059,0.301445281105245,0.23517741427141,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,1.07365135008297,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0.597423819763102,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0.335012514883631,0,0.390267295715598,0,0,0,0,0.172684981865896,0.578596234326046,3.01582567878545,7.61467957346193,0,1.37968373152366,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0.441056796109924,0.32977250588296,0.807322133479528,0.241251699712623,0.119372344003136,0.328281799490123,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0.188368457004691,0,0.915112692826091,0,0,0,0,0,0,0,0.418176592028937,0,0.269728692769641,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.443068581523732,0.201932899896295,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0,0,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.765153328275374,0,0|short_description=p3@Ms4a6b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69774 | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99N09 | |||
|association_with_transcript=-14bp_to_ENSMUST00000163078_5end | |||
|cluster_id=chr19:11590963..11590987,+ | |||
|description=CAGE_peak_3_at_Ms4a6b_5end | |||
|id=chr19:11590963..11590987,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.54e-10!9;CL:0000789!2.54e-10!9;CL:0002420!2.54e-10!9;CL:0002419!2.54e-10!9;CL:0000790!2.54e-10!9;CL:0000624!2.76e-09!8;CL:0000838!3.67e-08!12;CL:0000084!7.70e-08!11;CL:0000827!7.70e-08!11;CL:0000738!1.51e-07!17;CL:0002087!1.51e-07!17;CL:0000893!2.60e-07!6;CL:0002489!2.60e-07!6;CL:0000898!2.60e-07!6;CL:0000809!2.60e-07!6;CL:0000810!2.60e-07!6;CL:0000895!2.60e-07!6;CL:0000808!2.60e-07!6;CL:0000894!2.60e-07!6;CL:0000806!2.60e-07!6;CL:0000807!2.60e-07!6;CL:0000805!2.60e-07!6;CL:0002425!2.60e-07!6;CL:0002436!2.60e-07!6;CL:0002427!2.60e-07!6;CL:0002428!2.60e-07!6;CL:0002429!2.60e-07!6;CL:0002433!2.60e-07!6;CL:0002431!2.60e-07!6;CL:0002432!2.60e-07!6;CL:0000542!2.89e-07!13;CL:0000051!2.89e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.08e-34,9;CL:0000789,3.08e-34,9;CL:0002420,3.08e-34,9;CL:0002419,3.08e-34,9;CL:0000790,3.08e-34,9;CL:0000738,1.02e-29,17;CL:0002087,1.02e-29,17;CL:0000624,2.56e-28,8;CL:0000084,6.04e-28,11;CL:0000827,6.04e-28,11;CL:0000838,1.39e-25,12;CL:0002031,1.54e-24,25;CL:0000542,1.39e-23,13;CL:0000051,1.39e-23,13;CL:0000988,5.92e-19,32;CL:0002032,5.92e-19,32;CL:0000037,5.92e-19,32;CL:0000837,5.92e-19,32;CL:0000893,2.52e-17,6;CL:0002489,2.52e-17,6;CL:0000898,2.52e-17,6;CL:0000809,2.52e-17,6;CL:0000810,2.52e-17,6;CL:0000895,2.52e-17,6;CL:0000808,2.52e-17,6;CL:0000894,2.52e-17,6;CL:0000806,2.52e-17,6;CL:0000807,2.52e-17,6;CL:0000805,2.52e-17,6;CL:0002425,2.52e-17,6;CL:0002436,2.52e-17,6;CL:0002427,2.52e-17,6;CL:0002428,2.52e-17,6;CL:0002429,2.52e-17,6;CL:0002433,2.52e-17,6;CL:0002431,2.52e-17,6;CL:0002432,2.52e-17,6;CL:0002476,3.90e-14,2;CL:0002320,7.33e-13,46;CL:0000134,7.33e-13,46;CL:0000219,8.65e-11,54;CL:0000625,6.29e-08,1;CL:0000815,1.33e-07,1;CL:0000792,1.33e-07,1;CL:0002194,1.66e-07,4;CL:0000766,1.66e-07,4;CL:0000234,1.66e-07,4;CL:0000576,1.66e-07,4;CL:0000235,1.66e-07,4;CL:0000864,1.66e-07,4;CL:0002009,1.66e-07,4;CL:0000040,1.66e-07,4;CL:0000559,1.66e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.77e-07!45;UBERON:0003061!5.77e-07!45;UBERON:0004177!5.90e-07!29;UBERON:0002193!6.07e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.33e-13,46;UBERON:0002193,8.76e-08,48;UBERON:0002405,8.76e-08,48;UBERON:0000029,9.86e-08,1;UBERON:0001097,9.86e-08,1;UBERON:0003968,9.86e-08,1;UBERON:0001467,9.86e-08,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.93684985162364,1.40788722151667,1.17032263160997,0.856089841127525,0.957265907944037,11.9840510951844,4.80812213304486,0,0,0,1.26184866143295,0.685572168028694,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,6.04968838456435,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0,0,0.608930956624282,0.230615497256059,0.301445281105245,0.23517741427141,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.146199987425332,0.439100230582101,1.07365135008297,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0.597423819763102,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0.335012514883631,0,0.390267295715598,0,0,0,0,0.172684981865896,0.578596234326046,3.01582567878545,7.61467957346193,0,1.37968373152366,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0.441056796109924,0.32977250588296,0.807322133479528,0.241251699712623,0.119372344003136,0.328281799490123,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0.188368457004691,0,0.915112692826091,0,0,0,0,0,0,0,0.418176592028937,0,0.269728692769641,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.443068581523732,0.201932899896295,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0,0,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.765153328275374,0,0 | |||
|short_description=p3@Ms4a6b | |||
}} |
Revision as of 07:46, 6 August 2015
Short description: | p3@Ms4a6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ms4a6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | -14bp_to_ENSMUST00000163078_5end |
EntrezGene: | 69774 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.33e-13 | 46 |
hemolymphoid system | 8.76e-08 | 48 |
immune system | 8.76e-08 | 48 |
lymph node | 9.86e-08 | 1 |
axillary lymph node | 9.86e-08 | 1 |
peripheral lymph node | 9.86e-08 | 1 |
shoulder | 9.86e-08 | 1 |