FFCP PHASE1:Hg19::chr6:13487825..13487878,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54438 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21096 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NXC2 | |||
|association_with_transcript=0bp_to_NM_001242629,NM_018988_5end | |||
|description=CAGE_peak_1_at_GFOD1_5end | |||
|id=chr6:13487825..13487878,- | |||
|ontology_enrichment_celltype=CL:0002057!6.12e-19!42;CL:0000860!2.15e-18!45;CL:0002009!2.30e-16!65;CL:0002194!7.89e-16!63;CL:0000576!7.89e-16!63;CL:0000040!7.89e-16!63;CL:0000559!7.89e-16!63;CL:0000766!7.54e-15!76;CL:0000557!1.06e-14!71;CL:0000839!6.79e-14!70;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0000763!1.87e-13!112;CL:0000049!1.87e-13!112;CL:0000738!5.26e-13!140;CL:0002087!1.12e-12!119;CL:0002032!6.11e-12!165;CL:0000837!6.11e-12!165;CL:0002031!1.33e-11!124;CL:0000988!9.22e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.27e-15;33!CL:0002057;7.27e-15;33!CL:0000473;1.53e-12;39!CL:0000234;1.53e-12;39!CL:0000576;1.26e-10;48!CL:0000766;4.32e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.96e-19,42;CL:0002057,1.96e-19,42;CL:0000473,3.64e-19,48;CL:0000234,3.64e-19,48;CL:0002009,8.29e-17,61;CL:0002194,2.94e-16,59;CL:0000576,2.94e-16,59;CL:0000040,2.94e-16,59;CL:0000559,2.94e-16,59;CL:0000766,2.88e-15,72;CL:0000557,5.69e-15,67;CL:0000839,3.94e-14,66;CL:0000037,7.17e-14,168;CL:0000763,2.00e-13,108;CL:0000049,2.00e-13,108;CL:0000738,3.09e-13,136;CL:0002087,4.53e-13,115;CL:0002032,4.15e-12,161;CL:0000837,4.15e-12,161;CL:0002031,6.48e-12,120;CL:0000988,7.51e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.29e-31!115;UBERON:0001049!5.96e-20!57;UBERON:0005068!5.96e-20!57;UBERON:0006241!5.96e-20!57;UBERON:0007135!5.96e-20!57;UBERON:0003080!5.71e-17!42;UBERON:0002780!1.61e-16!41;UBERON:0001890!1.61e-16!41;UBERON:0006240!1.61e-16!41;UBERON:0002616!4.21e-16!59;UBERON:0001017!5.29e-16!82;UBERON:0001893!1.69e-15!34;UBERON:0002020!1.78e-15!34;UBERON:0003528!1.78e-15!34;UBERON:0000955!4.18e-15!69;UBERON:0006238!4.18e-15!69;UBERON:0001869!4.40e-15!32;UBERON:0002791!7.48e-15!33;UBERON:0005743!3.78e-14!86;UBERON:0002619!1.07e-13!22;UBERON:0000956!9.93e-13!25;UBERON:0000203!9.93e-13!25;UBERON:0001950!1.39e-12!20;UBERON:0000073!1.49e-12!94;UBERON:0001016!1.49e-12!94;UBERON:0002193!5.13e-12!112;UBERON:0003075!6.36e-12!86;UBERON:0007284!6.36e-12!86;UBERON:0002405!1.37e-11!115;UBERON:0002346!2.27e-11!90;UBERON:0002390!7.14e-11!102;UBERON:0003061!7.14e-11!102;UBERON:0002371!7.10e-10!80;UBERON:0001474!5.78e-09!86;UBERON:0003056!1.05e-08!61;UBERON:0000025!1.04e-07!194;UBERON:0004111!1.09e-07!241;UBERON:0000062!3.50e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.37e-14;22!UBERON:0001893;4.05e-14;34!UBERON:0001869;4.78e-14;32!UBERON:0003528;8.40e-14;34!UBERON:0002020;8.40e-14;34!UBERON:0002791;1.24e-13;32!UBERON:0000956;2.54e-13;25!UBERON:0000203;2.54e-13;25!UBERON:0001950;3.44e-13;20!UBERON:0002780;2.39e-12;41!UBERON:0001890;2.39e-12;41!UBERON:0000073;1.77e-11;53!UBERON:0002616;1.77e-11;53!UBERON:0007023;2.66e-08;114!UBERON:0000955;7.01e-08;68!UBERON:0001017;6.79e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.13e-31,114;UBERON:0001049,5.24e-20,56;UBERON:0005068,5.24e-20,56;UBERON:0006241,5.24e-20,56;UBERON:0007135,5.24e-20,56;UBERON:0000073,3.10e-19,53;UBERON:0002616,3.10e-19,53;UBERON:0002780,6.06e-17,41;UBERON:0001890,6.06e-17,41;UBERON:0003080,6.06e-17,41;UBERON:0006240,6.06e-17,41;UBERON:0001893,6.79e-16,34;UBERON:0003528,7.18e-16,34;UBERON:0002020,7.18e-16,34;UBERON:0001017,1.48e-15,81;UBERON:0001869,1.82e-15,32;UBERON:0002791,5.46e-15,32;UBERON:0000955,6.75e-15,68;UBERON:0006238,6.75e-15,68;UBERON:0002619,4.84e-14,22;UBERON:0001016,7.29e-14,89;UBERON:0000956,4.78e-13,25;UBERON:0000203,4.78e-13,25;UBERON:0001950,6.76e-13,20;UBERON:0002193,2.47e-12,108;UBERON:0003075,4.39e-12,82;UBERON:0007284,4.39e-12,82;UBERON:0002405,7.73e-12,93;UBERON:0002346,2.54e-11,86;UBERON:0002390,2.69e-11,98;UBERON:0003061,2.69e-11,98;UBERON:0002371,3.09e-10,76;UBERON:0010371,5.53e-10,104;UBERON:0001474,5.11e-09,82;UBERON:0003056,6.70e-09,61;UBERON:0003081,8.82e-08,203;UBERON:0010314,1.47e-07,132;UBERON:0000025,2.28e-07,192;UBERON:0004765,3.12e-07,90;UBERON:0002050,3.62e-07,564;UBERON:0000923,5.37e-07,560;UBERON:0010316,5.37e-07,560;UBERON:0005291,5.37e-07,560;UBERON:0006598,5.37e-07,560;UBERON:0010317,5.37e-07,560;UBERON:0002532,5.37e-07,560;UBERON:0004111,6.74e-07,240 | |||
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| |||
|short_description=p1@GFOD1 | |||
}} |
Revision as of 10:06, 22 January 2014
Short description: | p1@GFOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GFOD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001242629, NM_018988_5end |
EntrezGene: | GFOD1 |
HGNC: | 21096 |
UniProt: | Q9NXC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.96e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-19 | 42 |
defensive cell | 3.64e-19 | 48 |
phagocyte | 3.64e-19 | 48 |
macrophage dendritic cell progenitor | 8.29e-17 | 61 |
monopoietic cell | 2.94e-16 | 59 |
monocyte | 2.94e-16 | 59 |
monoblast | 2.94e-16 | 59 |
promonocyte | 2.94e-16 | 59 |
myeloid leukocyte | 2.88e-15 | 72 |
granulocyte monocyte progenitor cell | 5.69e-15 | 67 |
myeloid lineage restricted progenitor cell | 3.94e-14 | 66 |
hematopoietic stem cell | 7.17e-14 | 168 |
myeloid cell | 2.00e-13 | 108 |
common myeloid progenitor | 2.00e-13 | 108 |
leukocyte | 3.09e-13 | 136 |
nongranular leukocyte | 4.53e-13 | 115 |
hematopoietic oligopotent progenitor cell | 4.15e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.15e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 6.48e-12 | 120 |
hematopoietic cell | 7.51e-11 | 177 |