FFCP PHASE1:Hg19::chr7:35734257..35734280,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21915 | |||
|TSSclassifier=strong | |||
|UniProt=C9JDD7 | |||
|association_with_transcript=-46bp_to_ENST00000438224_5end | |||
|description=CAGE_peak_11_at_HERPUD2_5end | |||
|id=chr7:35734257..35734280,- | |||
|ontology_enrichment_celltype=CL:0002057!6.53e-14!42;CL:0000860!7.71e-13!45;CL:0000738!7.58e-12!140;CL:0002031!8.38e-11!124;CL:0000766!9.43e-11!76;CL:0002087!1.03e-10!119;CL:0000839!2.37e-09!70;CL:0000557!6.67e-09!71;CL:0002194!1.45e-08!63;CL:0000576!1.45e-08!63;CL:0000040!1.45e-08!63;CL:0000559!1.45e-08!63;CL:0002009!5.07e-08!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.35e-17;33!CL:0002057;2.35e-17;33!CL:0000473;3.71e-13;39!CL:0000234;3.71e-13;39!CL:0000766;1.43e-08;69!CL:0000775;6.70e-08;3!CL:0000576;7.66e-08;48!CL:0000738;9.20e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.96e-18,136;CL:0000766,1.03e-15,72;CL:0000860,8.37e-15,42;CL:0002057,8.37e-15,42;CL:0002031,6.51e-14,120;CL:0000473,1.76e-13,48;CL:0000234,1.76e-13,48;CL:0002087,4.63e-13,115;CL:0000037,3.07e-12,168;CL:0002032,1.27e-11,161;CL:0000837,1.27e-11,161;CL:0000839,4.82e-11,66;CL:0000988,5.13e-11,177;CL:0000557,8.75e-11,67;CL:0002194,1.28e-09,59;CL:0000576,1.28e-09,59;CL:0000040,1.28e-09,59;CL:0000559,1.28e-09,59;CL:0002009,3.97e-09,61;CL:0000763,6.45e-08,108;CL:0000049,6.45e-08,108;CL:0000775,6.85e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.38e-08!80;UBERON:0002390!1.17e-07!102;UBERON:0003061!1.17e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.02e-09,98;UBERON:0003061,3.02e-09,98;UBERON:0002371,8.88e-09,76;UBERON:0002193,1.52e-08,108;UBERON:0002405,2.41e-08,93;UBERON:0001474,1.06e-07,82 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.522371256399677,0.491467873003018,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0.376627918784408,0.0764134057479513,0.164201178899891,0.0787107813136792,1.18009283054671,1.91914699048606,0,0,0,0.369754010166788,0.0774672005803016,0,0.293600439334847,0,1.20326668482085,0.434021741431704,0.895661896959697,0,0.257575567634187,1.89017710413434,1.51150377475524,2.42584061187816,0.464858073811369,0.411167888021826,1.85823822537062,1.1507695692886,1.2808035326455,0.945928919554341,2.41321976515633,0.645484683583826,1.35426486594342,1.50593871634084,0.818718450173537,0.898893937780338,1.53041946185451,1.92557416245656,3.19668562899521,0.989553900560148,1.19678194572979,1.27867425159808,1.16083695451434,1.13477044938228,1.86846674698672,1.50749199154046,2.08593167368081,0.868755378820466,1.81619850790011,0,0.632924774881769,0.845021145247767,0.425208599930087,0.838634582033504,0.786300418025466,0,0.964353520182481,0.570025487482497,0.59675003159727,0.365328307529268,1.75996244461323,1.09227722252426,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0.954053754535364,2.27685187643779,3.52342313622563,2.6759125968766,1.32171328579026,1.12101712596307,0.526768169550154,0.786839080455332,3.14408610199332,3.08402248499264,0.668745981562712,0.32592226663359,1.89379122293893,1.94826728407911,0.334231370655521,0.883817722424512,0.221533894583621,0.812411591295047,0.384273959177026,1.30059347559878,0.328875809207352,1.10540007114339,0,0.444859689486181,1.07016331235885,0,0.339928028092699,1.53288197440768,0.34362744548263,1.26509846009751,0.318565414324097,1.30216690771284,0.950452044448374,0.301150238155546,1.4078527226986,0,0.947109008176067,0.821127996921047,0.604820229674197,6.95344509037119,2.75166367377318,0,0.670700859703636,0,0.722878304769133,0,0.869079113764942,0,0,0.378139268656271,0.443458794925128,0.087834785693126,1.5062593682237,0,0.741568885568859,0.324547393654683,0.522389211897802,0.930705723632056,0.238490624305342,0.571994910780128,0,0,0,0,0,0.838998872419812,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,1.62028389576352,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0.269421344139376,0.653847612453835,0,0,0,0,0,0.597794722207204,0.23486899728753,0.161872944368132,0,0.204154171254893,0.368502951935304,0.206651562351531,1.18800285728205,1.48360157567134,0,0,0,0.250237039743928,0,0.438977620880838,0.919463387397059,0.901428353439581,0.113432183160021,0.89694817844431,0,0.211931901159562,0.300091096084402,0,1.03056216018252,0,0,0.292311015483596,0.504867548488229,0,0.323292113637624,0,0.201504196455281,0.169560592310488,0.57978255948989,0.272746120590835,0.860413786167011,0.243947412259191,0.530119073285941,0,0.518305275076852,0.252320850875628,1.09493207722749,0,0,0,0.928735856063958,1.44375896333917,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,1.7658523976586,0.122988438543114,0,0.219500570817251,0,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0.738651018262192,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,3.94130590316755,0.352193736052904,1.24396869324463,1.00883967391873,0.50496973370552,0,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0.112131084345361,0,0.22001485746285,0.129271715757778,3.57656445851882,0.845302752556,1.06375246633948,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.710783897485092,0,0,0,0,0,1.00451418286425,0,0.239624855491583,0,0,0,0.61642896765115,0.179060963239896,0.112085143993527,0.788123040807709,4.9594342217689,1.92514554419623,0,0,0.773288812777695,0.502548796003046,0.637938751653163,7.49007023947182,11.966458368161,4.97298616123243,0.24538298343828,0,0,0.623912584592421,0.535286966391485,0.315404830067869,0,0.300946099727719,0,0,0,0,0.347534457872331,0,0.343143423810856,0.413536052245775,1.72571360654893,0.640365346820666,0,0,0.30239029332968,0.992431231275107,0.153461973288062,1.12264037773229,0.256278298511402,0.511707249066704,0,0,0,0.177561725313127,0.0821271560138091,1.55776328755086,0.464841513839837,0.483437798366489,0.601519410909855,0.644566922551274,0.229628896329213,0,0.786746489756545,0.451199612907412,0.385076685522074,0,0,0.211103257785751,1.13733384070897,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0.650756789328606,0.618246069886334,0.183138929636687,0,0.574265537996172,1.30012049207304,0,0.290012154876366,0,0.307007349452259,0,0,0.435050081742686,0.170453254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| |||
|short_description=p11@HERPUD2 | |||
}} |
Revision as of 16:29, 22 January 2014
Short description: | p11@HERPUD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HERPUD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENST00000438224_5end |
EntrezGene: | HERPUD2 |
HGNC: | 21915 |
UniProt: | C9JDD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.96e-18 | 136 |
myeloid leukocyte | 1.03e-15 | 72 |
classical monocyte | 8.37e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.37e-15 | 42 |
hematopoietic lineage restricted progenitor cell | 6.51e-14 | 120 |
defensive cell | 1.76e-13 | 48 |
phagocyte | 1.76e-13 | 48 |
nongranular leukocyte | 4.63e-13 | 115 |
hematopoietic stem cell | 3.07e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.27e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-11 | 161 |
myeloid lineage restricted progenitor cell | 4.82e-11 | 66 |
hematopoietic cell | 5.13e-11 | 177 |
granulocyte monocyte progenitor cell | 8.75e-11 | 67 |
monopoietic cell | 1.28e-09 | 59 |
monocyte | 1.28e-09 | 59 |
monoblast | 1.28e-09 | 59 |
promonocyte | 1.28e-09 | 59 |
macrophage dendritic cell progenitor | 3.97e-09 | 61 |
myeloid cell | 6.45e-08 | 108 |
common myeloid progenitor | 6.45e-08 | 108 |
neutrophil | 6.85e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.02e-09 | 98 |
blood island | 3.02e-09 | 98 |
bone marrow | 8.88e-09 | 76 |
hemolymphoid system | 1.52e-08 | 108 |
immune system | 2.41e-08 | 93 |
bone element | 1.06e-07 | 82 |