FFCP PHASE1:Hg19::chr8:22014298..22014326,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203190 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18711 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N145 | |||
|association_with_transcript=17bp_to_NM_139278,uc003xav.2,uc010ltu.2_5end | |||
|coexpression_cluster_id=C2076 | |||
|description=CAGE_peak_1_at_LGI3_5end | |||
|id=chr8:22014298..22014326,- | |||
|ontology_enrichment_celltype=CL:0000148!6.89e-08!10;CL:0000541!6.89e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.39e-12;10!CL:0000147;1.11e-08;14!CL:0002567;1.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.41e-12,10;CL:0000541,1.41e-12,10;CL:0000147,1.13e-08,14;CL:0002567,1.23e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.83e-23;82!UBERON:0006241;3.74e-09;3!UBERON:0003057;3.74e-09;3!UBERON:0006215;2.26e-08;3!UBERON:0002532;1.07e-07;206!UBERON:0010316;1.07e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-61!115;UBERON:0001049!2.19e-49!57;UBERON:0005068!2.19e-49!57;UBERON:0006241!2.19e-49!57;UBERON:0007135!2.19e-49!57;UBERON:0000955!3.91e-43!69;UBERON:0006238!3.91e-43!69;UBERON:0001017!3.74e-42!82;UBERON:0005743!5.00e-41!86;UBERON:0002616!2.66e-40!59;UBERON:0000073!8.77e-40!94;UBERON:0001016!8.77e-40!94;UBERON:0003080!5.57e-38!42;UBERON:0002780!5.29e-37!41;UBERON:0001890!5.29e-37!41;UBERON:0006240!5.29e-37!41;UBERON:0003075!1.52e-32!86;UBERON:0007284!1.52e-32!86;UBERON:0001893!9.89e-32!34;UBERON:0002020!1.39e-31!34;UBERON:0003528!1.39e-31!34;UBERON:0002791!2.16e-30!33;UBERON:0002346!2.89e-30!90;UBERON:0000153!4.54e-29!129;UBERON:0007811!4.54e-29!129;UBERON:0001869!5.18e-29!32;UBERON:0000033!2.90e-27!123;UBERON:0002619!2.89e-24!22;UBERON:0004121!1.25e-23!169;UBERON:0003056!1.31e-23!61;UBERON:0000924!1.49e-22!173;UBERON:0006601!1.49e-22!173;UBERON:0001950!6.33e-22!20;UBERON:0000956!1.48e-20!25;UBERON:0000203!1.48e-20!25;UBERON:0004111!1.88e-13!241;UBERON:0002308!7.24e-13!9;UBERON:0000125!7.24e-13!9;UBERON:0000025!1.29e-12!194;UBERON:0002420!1.48e-12!9;UBERON:0007245!1.48e-12!9;UBERON:0010009!1.48e-12!9;UBERON:0010011!1.48e-12!9;UBERON:0000454!1.48e-12!9;UBERON:0003076!3.36e-12!15;UBERON:0003057!3.36e-12!15;UBERON:0002298!1.43e-11!8;UBERON:0000475!1.56e-11!365;UBERON:0000477!9.13e-11!286;UBERON:0009663!2.74e-10!7;UBERON:0004732!5.47e-10!13;UBERON:0000062!6.46e-10!511;UBERON:0000064!6.61e-10!219;UBERON:0000200!2.97e-09!6;UBERON:0004733!8.87e-09!12;UBERON:0002028!8.87e-09!12;UBERON:0007277!8.87e-09!12;UBERON:0002021!8.34e-08!5;UBERON:0001872!1.19e-07!5;UBERON:0000349!1.58e-07!5;UBERON:0000483!2.78e-07!309;UBERON:0000119!5.00e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.82e-51;34!UBERON:0003528;2.27e-51;34!UBERON:0002020;2.27e-51;34!UBERON:0001869;5.52e-50;32!UBERON:0002791;5.89e-50;32!UBERON:0002619;8.78e-45;22!UBERON:0002780;7.09e-44;41!UBERON:0001890;7.09e-44;41!UBERON:0000073;1.52e-43;53!UBERON:0002616;1.52e-43;53!UBERON:0001950;4.93e-40;20!UBERON:0000956;6.00e-39;25!UBERON:0000203;6.00e-39;25!UBERON:0000955;7.57e-30;68!UBERON:0001017;7.79e-30;75!UBERON:0001016;8.64e-25;83!UBERON:0000125;1.64e-24;9!UBERON:0002308;1.64e-24;9!UBERON:0002420;7.27e-24;9!UBERON:0007245;7.27e-24;9!UBERON:0010009;7.27e-24;9!UBERON:0010011;7.27e-24;9!UBERON:0000454;7.27e-24;9!UBERON:0004732;5.81e-20;13!UBERON:0009663;2.83e-19;7!UBERON:0007023;1.23e-18;114!UBERON:0004733;1.85e-17;12!UBERON:0002028;1.85e-17;12!UBERON:0002298;2.96e-17;6!UBERON:0000200;3.51e-17;6!UBERON:0002021;3.09e-14;5!UBERON:0000349;1.18e-13;5!UBERON:0000369;2.86e-11;4!UBERON:0002435;2.86e-11;4!UBERON:0000204;2.86e-11;4!UBERON:0002680;1.12e-10;9!UBERON:0001895;1.12e-10;9!UBERON:0011216;1.78e-10;132!UBERON:0001871;6.50e-10;6!UBERON:0001872;8.41e-10;5!UBERON:0000988;9.61e-10;3!UBERON:0001870;2.29e-09;3!UBERON:0001896;3.21e-09;3!UBERON:0005290;3.21e-09;3!UBERON:0002240;3.74e-09;3!UBERON:0005174;3.74e-09;3!UBERON:0001137;3.74e-09;3!UBERON:0005383;1.24e-08;3!UBERON:0005382;1.24e-08;3!UBERON:0010314;8.69e-08;132!UBERON:0005162;2.80e-07;2!UBERON:0000122;2.80e-07;2!UBERON:0001897;5.58e-07;2!UBERON:0010225;5.58e-07;2!UBERON:0002148;6.35e-07;2!UBERON:0001875;6.35e-07;2!UBERON:0006331;6.35e-07;2!UBERON:0009662;6.35e-07;2!UBERON:0006514;6.35e-07;2 | |||
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|phase1_expression=0.181678379270557,0,0,0,0.893922188854576,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9669284742736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,3.80987365753014,3.81988425558278,37.509583107215,11.9750712215894,30.9510753037004,21.3243571069181,212.36903944452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,20.8771006030923,15.6143052215669,0,0,0.422250816255987,0,0,1.51159648712566,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,95.9639418634266,60.8558723941744,3.99227596002388,0,0,0.724999575434793,0,0.254253650292766,0,3.79217710565611,0,0,20.3720518737183,18.0894657938112,4.5774520895125,6.7453348558047,15.0729285666309,26.5456330556307,0.10893846351899,0.278847488557207,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.353830258013357,0.611030144933625,0,0,0,113.570909072441,0,55.7549380826307,0,0,0,1.57833761139756,0,0,0.63186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.74580229679155,0,5.19755703795225,0,0,48.0528941305119,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,36.6256376112972,48.6014095066575,0,0,0,0,0.687481272035051,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,20.6759719350419,22.8821722267447,0,0,0,0,0,40.2769560642704,0,0.394028536495991,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,43.5683562938425,37.950756700152,0,0,3.9511342650047,1.41483874589699,16.983801269235,0,0,0,0,0,0,0,0,0,31.8984544788115,30.7506187552947,33.6763603600485,21.2161402405326,27.8431919357499,58.9294863913729,0,0,3.1846314683746,3.99651466962954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7994403148981,0.779441235357554,0.265729680626726,0.817826971279221,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0.639471856518258,0,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,41.6205378625058,34.0071783181404,30.8093347980302,54.9711856165223,1.51243017733031,87.3456098623072,34.8787394564798,57.1077681036618,0,0,0.183428598521679,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,59.3655368795689,32.0242020431677,33.4832610331918,57.5181398458735,0.546974809018219,1.64477330057155,1.48863353516788,0,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0,0,0.171488009437418,70.9604012278123,71.5607776363798,0.236387681767936,0,0.313972371402056,16.8113681210122,0,0.913158720509496,0,0,17.0114175140442,0,0.116241425368125,0.347716544605159,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,31.9982801397361,27.625315230419,35.0804253894222,0,0,0.193373663920732,0,0.178553938605658,0,0,0.730336388246517,0,66.2228874159705,0,77.6462817980246,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,38.1417942151039,49.8547040054335,0.852935927603924,0.714193294391221,0.0645889098360061,0.0620747142958579,0,3.94612381324622,4.85081253499726,1.52401723527873,0.684466602170562,1.21233695426258,0.143444410785353,0.332660356546013,0.162806537221949,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@LGI3 | |||
}} |
Revision as of 21:02, 22 January 2014
Short description: | p1@LGI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGI3_5end |
Coexpression cluster: | C2076_Melanocyte_corpus_brain_occipital_temporal_postcentral_pons |
Association with transcript: | 17bp_to_NM_139278, uc003xav.2, uc010ltu.2_5end |
EntrezGene: | LGI3 |
HGNC: | 18711 |
UniProt: | Q8N145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.41e-12 | 10 |
melanoblast | 1.41e-12 | 10 |
pigment cell | 1.13e-08 | 14 |
light melanocyte | 1.23e-08 | 3 |