FFCP PHASE1:Mm9::chr4:155029114..155029133,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:155029114..155029133,-|id=chr4:155029114..155029133,-|ontology_enrichment_celltype=CL:0002563!7.55e-14!9;CL:0002251!7.55e-14!9;CL:0000239!6.98e-10!6;CL:0000677!6.98e-10!6;CL:0000212!6.98e-10!6;CL:0000584!6.98e-10!6;CL:0000066!3.52e-09!25;CL:0002076!6.99e-09!15;CL:0000075!2.83e-08!7;CL:0000223!2.96e-07!20|ontology_enrichment_celltype_v019_2=CL:0002563,1.59e-42,9;CL:0002251,1.59e-42,9;CL:0000239,3.05e-29,6;CL:0000677,3.05e-29,6;CL:0000584,3.05e-29,6;CL:0000066,4.71e-26,25;CL:0002076,4.60e-25,15;CL:0000075,5.16e-25,7;CL:0000223,1.69e-18,20;CL:0000682,6.38e-15,3;CL:0002250,8.81e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.11e-21!15;UBERON:0001242!1.32e-18!13;UBERON:0000060!1.32e-18!13;UBERON:0001262!1.32e-18!13;UBERON:0004786!1.32e-18!13;UBERON:0003350!7.55e-14!9;UBERON:0004808!7.55e-14!9;UBERON:0001277!7.55e-14!9;UBERON:0004923!4.72e-13!24;UBERON:0000485!7.64e-11!11;UBERON:0005409!2.55e-10!59;UBERON:0000160!1.23e-09!43|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.25e-51,15;UBERON:0001242,5.51e-43,13;UBERON:0001262,5.51e-43,13;UBERON:0004786,5.51e-43,13;UBERON:0003350,1.59e-42,9;UBERON:0004808,1.59e-42,9;UBERON:0001277,1.59e-42,9;UBERON:0000485,1.36e-34,11;UBERON:0004923,1.42e-31,24;UBERON:0000160,7.80e-24,31;UBERON:0005409,4.81e-15,47;UBERON:0001962,3.79e-10,2;UBERON:0001961,3.79e-10,2;UBERON:0001744,3.79e-10,2;UBERON:0001007,6.02e-08,116;UBERON:0001555,6.02e-08,116;UBERON:0007026,6.02e-08,116;UBERON:0004119,9.07e-08,118;UBERON:0000925,9.07e-08,118;UBERON:0006595,9.07e-08,118;UBERON:0003929,2.76e-07,55;UBERON:0002465,4.80e-07,3|phase1_expression=0,5.58360652222978,6.3699893514535,10.8887116070459,9.5170188689806,3.86122325397347,2.10251376535973,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.262261207256992,0,0,0,0,0.137114433605739,0,0,0,0,1.59992422793407,2.75291137280604,4.01962374880514,2.15380998079537,3.23206849028834,0.570070258369122,0.756090389279792,1.55211357458713,0,0,0,2.59966457776147,2.1610503896604,3.67504841272264,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.05780226665418,0,0,0,0,0.22237804384487,0,0,0.329397909448022,0,0.198956472041151,0,0,0.648414149624083,1.7922714592893,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.674321731924103,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr4:155029114..155029133,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:155029114..155029133,- | |||
|description=CAGE_peak_at_chr4:155029114..155029133,- | |||
|id=chr4:155029114..155029133,- | |||
|ontology_enrichment_celltype=CL:0002563!7.55e-14!9;CL:0002251!7.55e-14!9;CL:0000239!6.98e-10!6;CL:0000677!6.98e-10!6;CL:0000212!6.98e-10!6;CL:0000584!6.98e-10!6;CL:0000066!3.52e-09!25;CL:0002076!6.99e-09!15;CL:0000075!2.83e-08!7;CL:0000223!2.96e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.59e-42,9;CL:0002251,1.59e-42,9;CL:0000239,3.05e-29,6;CL:0000677,3.05e-29,6;CL:0000584,3.05e-29,6;CL:0000066,4.71e-26,25;CL:0002076,4.60e-25,15;CL:0000075,5.16e-25,7;CL:0000223,1.69e-18,20;CL:0000682,6.38e-15,3;CL:0002250,8.81e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.11e-21!15;UBERON:0001242!1.32e-18!13;UBERON:0000060!1.32e-18!13;UBERON:0001262!1.32e-18!13;UBERON:0004786!1.32e-18!13;UBERON:0003350!7.55e-14!9;UBERON:0004808!7.55e-14!9;UBERON:0001277!7.55e-14!9;UBERON:0004923!4.72e-13!24;UBERON:0000485!7.64e-11!11;UBERON:0005409!2.55e-10!59;UBERON:0000160!1.23e-09!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.25e-51,15;UBERON:0001242,5.51e-43,13;UBERON:0001262,5.51e-43,13;UBERON:0004786,5.51e-43,13;UBERON:0003350,1.59e-42,9;UBERON:0004808,1.59e-42,9;UBERON:0001277,1.59e-42,9;UBERON:0000485,1.36e-34,11;UBERON:0004923,1.42e-31,24;UBERON:0000160,7.80e-24,31;UBERON:0005409,4.81e-15,47;UBERON:0001962,3.79e-10,2;UBERON:0001961,3.79e-10,2;UBERON:0001744,3.79e-10,2;UBERON:0001007,6.02e-08,116;UBERON:0001555,6.02e-08,116;UBERON:0007026,6.02e-08,116;UBERON:0004119,9.07e-08,118;UBERON:0000925,9.07e-08,118;UBERON:0006595,9.07e-08,118;UBERON:0003929,2.76e-07,55;UBERON:0002465,4.80e-07,3 | |||
|phase1_expression=0,5.58360652222978,6.3699893514535,10.8887116070459,9.5170188689806,3.86122325397347,2.10251376535973,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.262261207256992,0,0,0,0,0.137114433605739,0,0,0,0,1.59992422793407,2.75291137280604,4.01962374880514,2.15380998079537,3.23206849028834,0.570070258369122,0.756090389279792,1.55211357458713,0,0,0,2.59966457776147,2.1610503896604,3.67504841272264,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.05780226665418,0,0,0,0,0.22237804384487,0,0,0.329397909448022,0,0.198956472041151,0,0,0.648414149624083,1.7922714592893,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.674321731924103,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:155029114..155029133,- | |||
}} |
Latest revision as of 07:25, 5 August 2015
Short description: | p@chr4:155029114..155029133, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:155029114..155029133, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.59e-42 | 9 |
epithelial cell of alimentary canal | 1.59e-42 | 9 |
brush border epithelial cell | 3.05e-29 | 6 |
gut absorptive cell | 3.05e-29 | 6 |
enterocyte | 3.05e-29 | 6 |
epithelial cell | 4.71e-26 | 25 |
endo-epithelial cell | 4.60e-25 | 15 |
columnar/cuboidal epithelial cell | 5.16e-25 | 7 |
endodermal cell | 1.69e-18 | 20 |
M cell of gut | 6.38e-15 | 3 |
intestinal crypt stem cell | 8.81e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.25e-51 | 15 |
intestinal mucosa | 5.51e-43 | 13 |
wall of intestine | 5.51e-43 | 13 |
gastrointestinal system mucosa | 5.51e-43 | 13 |
epithelium of mucosa | 1.59e-42 | 9 |
gastrointestinal system epithelium | 1.59e-42 | 9 |
intestinal epithelium | 1.59e-42 | 9 |
simple columnar epithelium | 1.36e-34 | 11 |
organ component layer | 1.42e-31 | 24 |
intestine | 7.80e-24 | 31 |
gastrointestinal system | 4.81e-15 | 47 |
gut-associated lymphoid tissue | 3.79e-10 | 2 |
mucosa-associated lymphoid tissue | 3.79e-10 | 2 |
lymphoid tissue | 3.79e-10 | 2 |
digestive system | 6.02e-08 | 116 |
digestive tract | 6.02e-08 | 116 |
primitive gut | 6.02e-08 | 116 |
endoderm-derived structure | 9.07e-08 | 118 |
endoderm | 9.07e-08 | 118 |
presumptive endoderm | 9.07e-08 | 118 |
gut epithelium | 2.76e-07 | 55 |
lymphoid system | 4.80e-07 | 3 |