FFCP PHASE1:Hg19::chr9:130912603..130912639,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C484 | |||
|description=CAGE_peak_at_chr9:130912603..130912639,- | |||
|id=chr9:130912603..130912639,- | |||
|ontology_enrichment_celltype=CL:0002076!2.15e-23!43;CL:0000066!2.40e-22!254;CL:0000223!4.84e-21!59;CL:0002251!1.67e-10!21;CL:0002368!3.57e-10!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.95e-14;42!CL:0002368;1.39e-10;13!CL:0002621;1.21e-09;3!CL:1000415;1.80e-07;2!CL:0002251;7.52e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.73e-20,42;CL:0000066,3.27e-16,253;CL:0000223,8.36e-15,58;CL:0002368,1.20e-10,13;CL:0002621,1.35e-09,3;CL:1000415,2.01e-07,2;CL:0002251,7.75e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;6.88e-09;58!UBERON:0008814;2.99e-07;2!UBERON:0010056;2.99e-07;2 | |||
|ontology_enrichment_disease=DOID:305!3.66e-17!106;DOID:1749!2.55e-16!14;DOID:299!1.05e-10!25;DOID:0050687!2.35e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:299;4.96e-11;25!DOID:1749;2.99e-10;14!DOID:3493;1.44e-07;2!DOID:4929;2.21e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.61e-15,106;DOID:299,4.35e-11,25;DOID:1749,2.81e-10,14;DOID:0050687,2.61e-09,143;DOID:3493,1.37e-07,2;DOID:4929,2.22e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.24e-25!169;UBERON:0000925!2.24e-25!169;UBERON:0006595!2.24e-25!169;UBERON:0001007!2.33e-21!155;UBERON:0001555!2.33e-21!155;UBERON:0007026!2.33e-21!155;UBERON:0000077!9.18e-18!130;UBERON:0004921!1.00e-16!129;UBERON:0004185!1.00e-16!129;UBERON:0000161!1.69e-16!35;UBERON:0001004!9.30e-16!72;UBERON:0000466!6.62e-15!126;UBERON:0001041!8.84e-14!98;UBERON:0000464!4.75e-13!104;UBERON:0000166!7.36e-13!21;UBERON:0005911!1.15e-12!82;UBERON:0005177!4.87e-11!107;UBERON:0002294!1.02e-10!7;UBERON:0001173!1.02e-10!7;UBERON:0004912!1.02e-10!7;UBERON:0000065!4.23e-10!53;UBERON:0000165!1.05e-09!28;UBERON:0000930!1.05e-09!28;UBERON:0003104!4.72e-09!238;UBERON:0009142!4.72e-09!238;UBERON:0005178!1.44e-07!34;UBERON:0002224!1.44e-07!34;UBERON:0001008!2.43e-07!45;UBERON:0005181!3.13e-07!35;UBERON:0009569!3.52e-07!113;UBERON:0003064!3.71e-07!37;UBERON:0003929!4.10e-07!54;UBERON:0002553!5.76e-07!70;UBERON:0000344!7.58e-07!12;UBERON:0003729!9.38e-07!5;UBERON:0002394!9.95e-07!4;UBERON:0003928!9.95e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.24e-11;7!UBERON:0001173;3.24e-11;7!UBERON:0001723;9.66e-10;3!UBERON:0001033;9.66e-10;3!UBERON:0001949;1.21e-09;3!UBERON:0000161;4.47e-09;19!UBERON:0000166;4.47e-09;19!UBERON:0000165;5.72e-09;28!UBERON:0006562;8.97e-08;2!UBERON:0002394;1.21e-07;4!UBERON:0003928;1.21e-07;4!UBERON:0005181;1.31e-07;35!UBERON:0004807;1.64e-07;22!UBERON:0001041;1.65e-07;14!UBERON:0003126;2.67e-07;7!UBERON:0001005;2.67e-07;7!UBERON:0003127;2.81e-07;2!UBERON:0001829;2.99e-07;2!UBERON:0005178;3.27e-07;34!UBERON:0002224;3.27e-07;34!UBERON:0007196;6.61e-07;15!UBERON:0001558;6.61e-07;15!UBERON:0000344;8.99e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.40e-17,160;UBERON:0000925,8.40e-17,160;UBERON:0006595,8.40e-17,160;UBERON:0001004,9.39e-16,74;UBERON:0001007,1.01e-15,145;UBERON:0001555,1.01e-15,145;UBERON:0007026,1.01e-15,145;UBERON:0004921,2.49e-14,118;UBERON:0001041,4.45e-14,87;UBERON:0000161,1.44e-13,36;UBERON:0000065,4.60e-12,54;UBERON:0000166,5.41e-12,22;UBERON:0001723,7.81e-10,3;UBERON:0001033,7.81e-10,3;UBERON:0010056,7.81e-10,3;UBERON:0001949,1.35e-09,3;UBERON:0005911,9.80e-09,82;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9;UBERON:0000165,1.28e-08,29;UBERON:0000930,1.28e-08,29;UBERON:0005178,1.90e-08,34;UBERON:0002224,1.90e-08,34;UBERON:0005181,3.83e-08,35;UBERON:0000072,4.03e-08,47;UBERON:0003127,2.22e-07,2;UBERON:0003126,2.65e-07,7;UBERON:0001005,2.65e-07,7;UBERON:0001829,2.68e-07,2;UBERON:0005177,3.28e-07,101;UBERON:0006562,5.22e-07,11;UBERON:0007196,6.19e-07,15;UBERON:0001558,6.19e-07,15;UBERON:0000344,9.86e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.154816123316076,2.75826367343678,0.30120591877825,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.728590576585084,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83152132908242,1.09098448236334,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,3.37205259772859,0.301586917234893,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,2.00506470303285,21.8231943778074,0,0,0,3.15839729035188,2.23344477602803,0,0,0.422206515571503,0,0,0,0,0,0,2.03901018436031,5.81753206250107,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65284915360978,1.92190067365106,0.638063562472921,3.0347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,4.69211592875051,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,1.3480252672099,37.5944466818779,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,6.82760689712998,0,0,0,0,0,0,0,0,0,0,0,0,3.06732237412927,1.30815439456455,0.341826167541004,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,8.97780444875312,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,4.26914319044689,0,0.347119476670262,0.783939179315021,2.87295381715328,0.17472666824203,0,0,0,0.0821154570532092,1.16386819786103,0,6.77942222341597,0,0,0,2.15106521008283,6.01191151886503,0.85381197895741,3.59657297247834,0.288180834308212,0,0,4.32164393964449,0,1.64985824231757,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,1.34173875039706,0.0788057072991982,0.209818352539992,0,0,3.45447355175002,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,1.53978154095896,0.704815022316672,0.854299300541557,0,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0,4.6488667138898,0,0,0,0,0,4.05650572386389,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.353909170043221,0.733714394086716,2.07946199070609,0,0,0,0,0,0,0,0.163771917510097,2.66140955190681,0,0,0,0,0,2.74128883428591,1.48863353516788,0,59.2817664247722,0,0,0,0,0.0887023701626388,0,0,0,0,0,1.33477682270483,0.39246546425257,0,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,2.58136415292167,0,0,0,21.5360456431407,0,0,1.56597604516909,24.635708637426,2.43835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.644578879735772,0,93.2051559521533,3.52894871715692,1.28386186702669,0,3.21110498383179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,2.13233981900981,0.476128862927481,0,0.186224142887574,0,0.0636471582781649,0,3.48346796635138,1.71116650542641,3.09819443867103,14.2727188731426,1.66330178273007,19.21117139219,0.106727345877715,0,4.04213409479641,2.34640942403454,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p@chr9:130912603..130912639,- | |||
}} |
Revision as of 03:29, 23 January 2014
Short description: | p@chr9:130912603..130912639, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130912603..130912639, - |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.73e-20 | 42 |
epithelial cell | 3.27e-16 | 253 |
endodermal cell | 8.36e-15 | 58 |
respiratory epithelial cell | 1.20e-10 | 13 |
gingival epithelial cell | 1.35e-09 | 3 |
epithelial cell of gall bladder | 2.01e-07 | 2 |
epithelial cell of alimentary canal | 7.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.40e-17 | 160 |
endoderm | 8.40e-17 | 160 |
presumptive endoderm | 8.40e-17 | 160 |
respiratory system | 9.39e-16 | 74 |
digestive system | 1.01e-15 | 145 |
digestive tract | 1.01e-15 | 145 |
primitive gut | 1.01e-15 | 145 |
subdivision of digestive tract | 2.49e-14 | 118 |
foregut | 4.45e-14 | 87 |
orifice | 1.44e-13 | 36 |
respiratory tract | 4.60e-12 | 54 |
oral opening | 5.41e-12 | 22 |
tongue | 7.81e-10 | 3 |
gustatory system | 7.81e-10 | 3 |
future tongue | 7.81e-10 | 3 |
gingival epithelium | 1.35e-09 | 3 |
endo-epithelium | 9.80e-09 | 82 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |
mouth | 1.28e-08 | 29 |
stomodeum | 1.28e-08 | 29 |
thoracic cavity element | 1.90e-08 | 34 |
thoracic cavity | 1.90e-08 | 34 |
thoracic segment organ | 3.83e-08 | 35 |
segment of respiratory tract | 4.03e-08 | 47 |
open tracheal system trachea | 2.22e-07 | 2 |
trachea | 2.65e-07 | 7 |
respiratory airway | 2.65e-07 | 7 |
major salivary gland | 2.68e-07 | 2 |
trunk region element | 3.28e-07 | 101 |
pharynx | 5.22e-07 | 11 |
tracheobronchial tree | 6.19e-07 | 15 |
lower respiratory tract | 6.19e-07 | 15 |
mucosa | 9.86e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.61e-15 | 106 |
adenocarcinoma | 4.35e-11 | 25 |
squamous cell carcinoma | 2.81e-10 | 14 |
cell type cancer | 2.61e-09 | 143 |
signet ring cell adenocarcinoma | 1.37e-07 | 2 |
tubular adenocarcinoma | 2.22e-07 | 2 |