FF:11210-116A4: Difference between revisions

Revision as of 14:53, 15 May 2017

Name:	Smooth Muscle Cells - Aortic, donor0
Species:	Human (Homo sapiens)
Library ID:	CNhs10838
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	aorta
dev stage	54 years old adult
sex	male
age	54
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	CA354-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005794

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10838		CAGE		DRX008467		DRR009339

Accession ID Hg19

Library id		BAM		CTSS
CNhs10838		DRZ000764		DRZ002149

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.102
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0236
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.221
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.282
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.23
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.594
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.429
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.568
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0031
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0609
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.23
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.323
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.715
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.23
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.203
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10838

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.933
MA0003.1	MA0003.1	0.513
MA0004.1	MA0004.1	0.529
MA0006.1	MA0006.1	0.131
MA0007.1	MA0007.1	0.211
MA0009.1	MA0009.1	0.528
MA0014.1	MA0014.1	0.713
MA0017.1	MA0017.1	0.446
MA0018.2	MA0018.2	0.181
MA0019.1	MA0019.1	0.347
MA0024.1	MA0024.1	0.121
MA0025.1	MA0025.1	0.733
MA0027.1	MA0027.1	0.208
MA0028.1	MA0028.1	0.29
MA0029.1	MA0029.1	0.408
MA0030.1	MA0030.1	0.665
MA0031.1	MA0031.1	0.236
MA0035.2	MA0035.2	0.768
MA0038.1	MA0038.1	0.855
MA0039.2	MA0039.2	0.925
MA0040.1	MA0040.1	0.536
MA0041.1	MA0041.1	0.389
MA0042.1	MA0042.1	0.608
MA0043.1	MA0043.1	0.232
MA0046.1	MA0046.1	0.374
MA0047.2	MA0047.2	0.753
MA0048.1	MA0048.1	0.0866
MA0050.1	MA0050.1	2.46633e-4
MA0051.1	MA0051.1	0.168
MA0052.1	MA0052.1	0.593
MA0055.1	MA0055.1	0.0086
MA0057.1	MA0057.1	0.731
MA0058.1	MA0058.1	0.373
MA0059.1	MA0059.1	0.965
MA0060.1	MA0060.1	0.466
MA0061.1	MA0061.1	0.916
MA0062.2	MA0062.2	0.81
MA0065.2	MA0065.2	0.0964
MA0066.1	MA0066.1	0.928
MA0067.1	MA0067.1	0.0934
MA0068.1	MA0068.1	0.976
MA0069.1	MA0069.1	0.426
MA0070.1	MA0070.1	0.572
MA0071.1	MA0071.1	0.508
MA0072.1	MA0072.1	0.683
MA0073.1	MA0073.1	0.992
MA0074.1	MA0074.1	0.685
MA0076.1	MA0076.1	0.167
MA0077.1	MA0077.1	0.581
MA0078.1	MA0078.1	0.434
MA0079.2	MA0079.2	0.225
MA0080.2	MA0080.2	0.00153
MA0081.1	MA0081.1	0.425
MA0083.1	MA0083.1	4.44978e-4
MA0084.1	MA0084.1	0.227
MA0087.1	MA0087.1	0.514
MA0088.1	MA0088.1	0.436
MA0090.1	MA0090.1	0.00533
MA0091.1	MA0091.1	0.4
MA0092.1	MA0092.1	0.317
MA0093.1	MA0093.1	0.664
MA0099.2	MA0099.2	7.40532e-16
MA0100.1	MA0100.1	0.0965
MA0101.1	MA0101.1	0.314
MA0102.2	MA0102.2	0.968
MA0103.1	MA0103.1	7.96857e-4
MA0104.2	MA0104.2	0.0277
MA0105.1	MA0105.1	0.453
MA0106.1	MA0106.1	0.312
MA0107.1	MA0107.1	0.516
MA0108.2	MA0108.2	9.01263e-8
MA0111.1	MA0111.1	2.55525e-4
MA0112.2	MA0112.2	0.888
MA0113.1	MA0113.1	0.539
MA0114.1	MA0114.1	0.179
MA0115.1	MA0115.1	0.805
MA0116.1	MA0116.1	0.215
MA0117.1	MA0117.1	0.954
MA0119.1	MA0119.1	0.274
MA0122.1	MA0122.1	0.76
MA0124.1	MA0124.1	0.301
MA0125.1	MA0125.1	0.55
MA0131.1	MA0131.1	0.53
MA0135.1	MA0135.1	0.776
MA0136.1	MA0136.1	0.172
MA0137.2	MA0137.2	0.858
MA0138.2	MA0138.2	0.432
MA0139.1	MA0139.1	0.828
MA0140.1	MA0140.1	0.984
MA0141.1	MA0141.1	0.764
MA0142.1	MA0142.1	0.61
MA0143.1	MA0143.1	0.699
MA0144.1	MA0144.1	0.641
MA0145.1	MA0145.1	0.294
MA0146.1	MA0146.1	0.471
MA0147.1	MA0147.1	0.133
MA0148.1	MA0148.1	0.811
MA0149.1	MA0149.1	0.913
MA0150.1	MA0150.1	0.0352
MA0152.1	MA0152.1	0.443
MA0153.1	MA0153.1	0.777
MA0154.1	MA0154.1	0.803
MA0155.1	MA0155.1	0.0924
MA0156.1	MA0156.1	0.513
MA0157.1	MA0157.1	0.386
MA0159.1	MA0159.1	0.332
MA0160.1	MA0160.1	0.766
MA0162.1	MA0162.1	0.133
MA0163.1	MA0163.1	0.748
MA0164.1	MA0164.1	0.496
MA0258.1	MA0258.1	0.46
MA0259.1	MA0259.1	0.463

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10838

Novel motif	Logo	P-value
1	1	0.765
10	10	0.192
100	100	0.508
101	101	0.0308
102	102	0.494
103	103	0.785
104	104	0.477
105	105	0.484
106	106	0.439
107	107	0.519
108	108	0.428
109	109	0.432
11	11	0.619
110	110	0.898
111	111	0.0789
112	112	0.347
113	113	0.0195
114	114	0.555
115	115	0.966
116	116	0.0984
117	117	0.408
118	118	0.376
119	119	0.99
12	12	0.208
120	120	0.977
121	121	0.507
122	122	0.584
123	123	0.0457
124	124	0.421
125	125	0.811
126	126	0.672
127	127	0.951
128	128	0.822
129	129	0.862
13	13	0.113
130	130	0.0456
131	131	0.374
132	132	0.85
133	133	0.229
134	134	0.123
135	135	0.166
136	136	0.387
137	137	0.932
138	138	0.216
139	139	0.94
14	14	0.369
140	140	0.0801
141	141	0.00707
142	142	0.833
143	143	0.0612
144	144	0.627
145	145	0.214
146	146	0.397
147	147	0.29
148	148	0.219
149	149	0.545
15	15	0.866
150	150	0.304
151	151	0.991
152	152	0.00507
153	153	0.503
154	154	0.547
155	155	0.0587
156	156	0.761
157	157	0.555
158	158	0.0566
159	159	0.41
16	16	0.985
160	160	0.83
161	161	0.163
162	162	0.315
163	163	0.568
164	164	0.987
165	165	0.878
166	166	0.238
167	167	0.296
168	168	0.888
169	169	0.316
17	17	0.673
18	18	0.43
19	19	0.906
2	2	0.403
20	20	0.355
21	21	0.511
22	22	0.325
23	23	0.242
24	24	0.103
25	25	0.0746
26	26	0.219
27	27	0.793
28	28	0.179
29	29	0.425
3	3	0.765
30	30	0.171
31	31	0.91
32	32	0.304
33	33	0.663
34	34	0.409
35	35	0.534
36	36	0.196
37	37	0.922
38	38	0.982
39	39	0.252
4	4	0.983
40	40	0.745
41	41	0.517
42	42	0.973
43	43	0.729
44	44	0.302
45	45	0.589
46	46	0.975
47	47	0.525
48	48	0.934
49	49	0.195
5	5	0.732
50	50	0.178
51	51	0.951
52	52	0.971
53	53	0.124
54	54	0.981
55	55	0.244
56	56	0.796
57	57	0.656
58	58	0.108
59	59	0.35
6	6	0.24
60	60	0.5
61	61	0.364
62	62	0.0747
63	63	0.44
64	64	0.658
65	65	0.635
66	66	0.366
67	67	0.865
68	68	0.295
69	69	0.397
7	7	0.336
70	70	0.983
71	71	0.913
72	72	0.579
73	73	0.00492
74	74	0.968
75	75	0.82
76	76	0.926
77	77	0.0879
78	78	0.121
79	79	0.765
8	8	0.598
80	80	0.929
81	81	0.789
82	82	0.146
83	83	0.717
84	84	0.776
85	85	0.889
86	86	0.694
87	87	0.0243
88	88	0.176
89	89	0.569
9	9	0.385
90	90	0.746
91	91	0.805
92	92	0.901
93	93	0.793
94	94	0.915
95	95	0.53
96	96	0.556
97	97	0.269
98	98	0.337
99	99	0.00496

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10838

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000168 human aortic smooth muscle cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0002539 (aortic smooth muscle cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001135 (smooth muscle tissue)
0000947 (aorta)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0004573 (systemic artery)
0002385 (muscle tissue)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0004237 (blood vessel smooth muscle)
0004695 (arterial system smooth muscle)
0002049 (vasculature)
0010317 (germ layer / neural crest derived structure)
0002111 (artery smooth muscle tissue)
0007798 (vascular system)
0001015 (musculature)
0004178 (aorta smooth muscle tissue)
0002204 (musculoskeletal system)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0000383 (musculature of body)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)
0000168 (human aortic smooth muscle cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.97!92.71!SOX17;;chr6:134210243..134210257,+!p1@TCF21!1.65!43.22!TCF21;;chr16:86544113..86544145,+!p1@FOXF1!1.49!36.94!FOXF1;;chr11:46299199..46299233,+!p1@CREB3L1!1.39!119.19!CREB3L1;;chr1:170633348..170633399,+!p2@PRRX1!1.39!32.06!PRRX1;;chr4:174451370..174451387,-!p1@HAND2!1.38!23.00!HAND2;;chr11:65686802..65686818,+!p6@DRAP1!1.37!38.34!DRAP1;;chr2:239756671..239756732,+!p1@TWIST2!1.30!59.25!TWIST2;;chr20:6748325..6748352,+!p1@BMP2!1.30!27.18!BMP2;;chr11:46299539..46299620,+!p2@CREB3L1!1.28!29.97!CREB3L1;;chr1:170632285..170632309,+!p1@PRRX1!1.28!20.21!PRRX1;;chr6:34204921..34204939,+!p3@HMGA1!1.27!514.41!HMGA1;;chr9:132427972..132428056,+!p1@PRRX2!1.22!20.21!PRRX2;;chr1:170633262..170633285,+!p3@PRRX1!1.21!17.43!PRRX1;;chr4:174450089..174450153,-!p2@HAND2!1.21!15.33!HAND2;;chr11:65687362..65687436,+!p3@DRAP1!1.17!62.73!DRAP1;;chr11:65686732..65686756,+!p2@DRAP1!1.17!58.55!DRAP1;;chr10:94449703..94449718,+!p1@HHEX!1.17!52.97!HHEX;;chr9:132427883..132427951,+!p2@PRRX2!1.17!13.94!PRRX2;;chr5:72744594..72744609,-!p1@FOXD1!1.16!61.34!FOXD1;;chr11:34642612..34642646,+!p1@EHF!1.15!13.24!EHF;;chr11:65667884..65667895,-!p2@FOSL1!1.14!49.49!FOSL1;;chrY:2803415..2803468,+!p1@ZFY!1.13!12.55!ZFY;;chr5:72744445..72744466,-!p2@FOXD1!1.12!20.21!FOXD1;;chr2:102091566..102091581,-!p1@RFX8!1.11!11.85!RFX8;;chr11:65667846..65667868,-!p1@FOSL1!1.07!287.18!FOSL1;;chr18:53068911..53068935,-!p4@TCF4!1.06!11.85!TCF4;;chr2:239756739..239756755,+!p2@TWIST2!1.03!16.73!TWIST2;;chr16:86600426..86600441,+!p1@FOXC2!1.02!23.70!FOXC2;;chr1:170633058..170633084,+!p5@PRRX1!1.00!9.06!PRRX1;;chr15:67418119..67418162,+!p5@SMAD3!0.99!9.76!SMAD3;;chr12:66218836..66218888,+!p1@HMGA2!0.98!81.55!HMGA2;;chr2:19558373..19558392,-!p1@OSR1!0.96!23.00!OSR1;;chr15:57511609..57511651,+!p2@TCF12!0.96!13.94!TCF12;;chr15:83953397..83953425,-!p1@BNC1!0.95!9.06!BNC1;;chr12:124873852..124873881,-!p3@NCOR2!0.94!48.10!NCOR2;;chr2:121493425..121493474,+!p1@GLI2!0.94!17.43!GLI2;;chrY:21906594..21906622,-!p1@KDM5D!0.94!7.67!KDM5D;;chr7:35293685..35293718,-!p1@TBX20!0.94!7.67!TBX20;;chr11:65687158..65687216,+!p4@DRAP1!0.93!44.61!DRAP1;;chr9:35732647..35732678,+!p2@CREB3!0.92!41.82!CREB3;;chr19:13134772..13134822,+!p2@NFIX!0.90!10.46!NFIX;;chr17:46671108..46671147,-!p1@HOXB5!0.90!6.97!HOXB5;;chr1:170632477..170632506,+!p6@PRRX1!0.90!6.97!PRRX1;;chr15:96869114..96869160,+!p11@NR2F2!0.88!9.06!NR2F2;;chr11:65687222..65687240,+!p7@DRAP1!0.87!8.36!DRAP1;;chr11:120107344..120107351,+!p1@POU2F3!0.86!7.67!POU2F3;;chr12:66218923..66218934,+!p14@HMGA2!0.86!6.27!HMGA2;;chr2:102091478..102091490,-!p3@RFX8!0.86!6.27!RFX8;;chr12:124873357..124873401,-!p1@NCOR2!0.85!75.98!NCOR2;;chr17:59477233..59477263,+!p1@TBX2!0.84!19.52!TBX2;;chr17:46622070..46622109,-!p1@HOXB2!0.84!13.94!HOXB2;;chr17:46622114..46622138,-!p4@HOXB2!0.83!9.06!HOXB2;;chr12:66218255..66218304,+!p3@HMGA2!0.82!16.03!HMGA2;;chr19:31840130..31840160,-!p2@TSHZ3!0.82!9.06!TSHZ3;;chr18:19749386..19749404,+!p2@GATA6!0.82!8.36!GATA6;;chr1:170632115..170632136,+!p9@PRRX1!0.82!5.58!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.82!5.58!PRRX1;;chr7:27153454..27153469,-!p2@HOXA3!0.82!5.58!HOXA3;;chr6:34204672..34204692,+!p1@HMGA1!0.81!665.67!HMGA1;;chr7:137686763..137686784,-!p5@CREB3L2!0.81!9.76!CREB3L2;;chr12:115121962..115121987,-!p1@TBX3!0.80!48.10!TBX3;;chr2:121493492..121493537,+!p2@GLI2!0.80!9.06!GLI2;;chr12:27485762..27485776,+!p3@ARNTL2!0.79!14.64!ARNTL2;;chr17:1959369..1959388,+!p2@HIC1!0.79!14.64!HIC1;;chr8:145159846..145159889,+!p6@MAF1!0.79!7.67!MAF1;;chr19:13136130..13136165,+!p6@NFIX!0.79!6.97!NFIX;;chr17:46621937..46621966,-!p2@HOXB2!0.78!14.64!HOXB2;;chr9:35732592..35732640,+!p1@CREB3!0.77!71.79!CREB3;;chr1:37940170..37940190,+!p1@ZC3H12A!0.77!66.92!ZC3H12A;;chr12:53614115..53614154,-!p1@RARG!0.77!28.58!RARG;;chr12:66218598..66218645,+!p2@HMGA2!0.77!24.40!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!0.77!16.73!GATA6;;chr4:26322267..26322334,+!p3@RBPJ!0.77!12.55!RBPJ;;chr5:72744562..72744573,-!p3@FOXD1!0.77!6.27!FOXD1;;chr2:102091144..102091183,-!p2@RFX8!0.77!4.88!RFX8;;chr18:3448455..3448480,+!p5@TGIF1!0.75!9.06!TGIF1;;chr12:66218212..66218244,+!p5@HMGA2!0.75!6.97!HMGA2;;chr14:62162285..62162296,+!p3@HIF1A!0.74!25.79!HIF1A;;chr11:65687243..65687276,+!p8@DRAP1!0.74!6.27!DRAP1;;chr15:67418047..67418093,+!p4@SMAD3!0.72!5.58!SMAD3;;chr6:34204973..34204990,+!p4@HMGA1!0.71!62.73!HMGA1;;chr3:5021268..5021282,+!p4@BHLHE40!0.71!9.06!BHLHE40;;chr3:141087562..141087594,+!p12@ZBTB38!0.71!4.18!ZBTB38;;chr3:25470156..25470227,+!p2@RARB!0.71!4.18!RARB;;chr5:72744336..72744359,-!p5@FOXD1!0.71!4.18!FOXD1;;chr8:25902876..25902936,-!p1@EBF2!0.71!4.18!EBF2;;chr11:46299443..46299459,+!p4@CREB3L1!0.71!4.18!CREB3L1;;chr12:115122318..115122331,-!p2@TBX3!0.71!4.18!TBX3;;chr12:66218904..66218913,+!p11@HMGA2!0.71!4.18!HMGA2;;chr5:72743793..72743855,-!p4@FOXD1!0.70!4.88!FOXD1;;chr14:62162258..62162269,+!p2@HIF1A!0.69!43.22!HIF1A;;chr3:141087393..141087426,+!p3@ZBTB38!0.69!17.43!ZBTB38;;chr22:38598086..38598105,+!p1@MAFF!0.68!46.00!MAFF;;chr1:170632959..170632987,+!p4@PRRX1!0.68!4.18!PRRX1;;chr11:65686952..65686975,+!p5@DRAP1!0.67!23.00!DRAP1;;chr5:321810..321877,+!p1@AHRR!0.67!13.24!AHRR;;chr21:36260343..36260402,-!p6@RUNX1!0.67!6.27!RUNX1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.66!295.54!TAX1BP3;;chr15:42749722..42749739,-!p2@ZFP106!0.66!6.97!ZFP106;;chr2:200322654..200322707,-!p2@SATB2!0.66!5.58!SATB2;;chr10:94449675..94449694,+!p2@HHEX!0.65!10.46!HHEX;;chr14:61191018..61191048,-!p1@SIX4!0.65!8.36!SIX4;;chr17:41622765..41622821,-!p2@ETV4!0.65!5.58!ETV4;;chr17:59477275..59477286,+!p3@TBX2!0.65!4.88!TBX2;;chr15:67458491..67458505,+!p18@SMAD3!0.65!3.49!SMAD3;;chr15:96869165..96869183,+!p20@NR2F2!0.65!3.49!NR2F2;;chr16:86600458..86600461,+!p3@FOXC2!0.65!3.49!FOXC2;;chr19:13135582..13135600,+!p3@NFIX!0.65!3.49!NFIX;;chr12:54447637..54447659,+!p4@HOXC4!0.65!3.49!HOXC4;;chr7:1577899..1577943,+!p3@MAFK!0.65!3.49!MAFK;;chr7:27153590..27153608,-!p7@HOXA3!0.65!3.49!HOXA3;;chr19:47523058..47523114,+!p1@NPAS1!0.65!3.49!NPAS1;;chr1:170632762..170632786,+!p13@PRRX1!0.65!3.49!PRRX1;;chr12:66218378..66218401,+!p6@HMGA2!0.64!5.58!HMGA2;;chr8:106330656..106330684,+!p1@ZFPM2!0.63!9.76!ZFPM2;;chr2:185463247..185463263,+!p1@ZNF804A!0.63!6.27!ZNF804A;;chr12:26277929..26277955,-!p3@BHLHE41!0.63!4.88!BHLHE41;;chr7:44143925..44143970,+!p1@AEBP1!0.62!85.04!AEBP1;;chr1:151032860..151032918,+!p1@MLLT11!0.62!44.61!MLLT11;;chr14:24837368..24837401,+!p1@NFATC4!0.62!8.36!NFATC4;;chr21:36260295..36260310,-!p3@RUNX1!0.62!5.58!RUNX1;;chr15:96869292..96869320,+!p15@NR2F2!0.62!4.88!NR2F2;;chr20:30193083..30193098,+!p1@ID1!0.61!304.61!ID1;;chr19:31840313..31840380,-!p1@TSHZ3!0.61!9.06!TSHZ3;;chr3:141121847..141121868,+!p5@ZBTB38!0.60!4.88!ZBTB38;;chr10:77161533..77161546,-!p2@ZNF503!0.58!13.24!ZNF503;;chr12:8185346..8185360,+!p2@FOXJ2!0.58!4.88!FOXJ2;;chr11:65686776..65686787,+!p9@DRAP1!0.58!3.49!DRAP1;;chr12:115122005..115122016,-!p3@TBX3!0.58!3.49!TBX3;;chr10:131762504..131762555,-!p1@EBF3!0.58!2.79!EBF3;;chr1:170632250..170632277,+!p7@PRRX1!0.58!2.79!PRRX1;;chr7:27169801..27169844,-!p2@HOXA4!0.58!2.79!HOXA4;;chr7:27183291..27183324,-!p1@HOXA5!0.58!2.79!HOXA5;;chr2:214016899..214016926,-!p10@IKZF2!0.58!2.79!IKZF2;;chr3:168864383..168864400,-!p7@MECOM!0.58!2.79!MECOM;;chr4:174451350..174451363,-!p3@HAND2!0.58!2.79!HAND2;;chr16:31076332..31076388,-!p3@ZNF668!0.58!2.79!ZNF668;;chr12:52445218..52445237,+!p1@NR4A1!0.57!42.52!NR4A1;;chr17:3571887..3571918,-!p2@TAX1BP3!0.57!37.64!TAX1BP3;;chr17:1958388..1958404,+!p1@HIC1!0.57!20.91!HIC1;;chr19:52074502..52074587,+!p1@ZNF175!0.57!11.85!ZNF175;;chr6:1312325..1312340,+!p1@FOXQ1!0.57!4.88!FOXQ1;;chr3:52001448..52001478,-!p2@PCBP4!0.56!45.31!PCBP4;;chr1:164528445..164528459,+!p2@PBX1!0.56!9.76!PBX1;;chr2:71127699..71127744,+!p1@VAX2!0.56!6.27!VAX2;;chr19:3366625..3366629,+!p4@NFIC!0.56!4.18!NFIC;;chr1:151032739..151032748,+!p6@MLLT11!0.56!3.49!MLLT11;;chr11:65686855..65686946,+!p1@DRAP1!0.55!242.57!DRAP1;;chr8:77593474..77593612,+!p1@ZFHX4!0.55!13.24!ZFHX4;;chr11:65430554..65430579,-!p3@RELA!0.55!7.67!RELA;;chr17:59477197..59477212,+!p2@TBX2!0.55!4.88!TBX2;;chr12:66218573..66218596,+!p7@HMGA2!0.55!4.18!HMGA2;;chr7:137686552..137686564,-!p9@CREB3L2!0.55!4.18!CREB3L2;;chr6:35310395..35310410,+!p2@PPARD!0.54!11.85!PPARD;;chr19:45260775..45260838,+!p5@BCL3!0.54!3.49!BCL3;;chr3:178789522..178789564,-!p2@ZMAT3!0.53!22.31!ZMAT3;;chr12:27485785..27485816,+!p1@ARNTL2!0.53!20.91!ARNTL2;;chr7:14029283..14029311,-!p1@ETV1!0.53!16.03!ETV1;;chr16:8962202..8962222,-!p3@CARHSP1!0.53!4.88!CARHSP1;;chr18:19749517..19749531,+!p3@GATA6!0.53!4.88!GATA6;;chr19:13134457..13134462,+!p5@NFIX!0.53!4.88!NFIX;;chr20:50721803..50721857,-!p2@ZFP64!0.53!4.18!ZFP64;;chr11:46299186..46299195,+!p3@CREB3L1!0.53!2.79!CREB3L1;;chr8:72756637..72756664,-!p3@MSC!0.53!2.79!MSC;;chr1:23885981..23886002,-!p1@ID3!0.52!529.05!ID3;;chr7:19157043..19157088,-!p2@TWIST1!0.52!6.97!TWIST1;;chr7:44143978..44143989,+!p2@AEBP1!0.52!4.88!AEBP1;;chr15:96869255..96869291,+!p6@NR2F2!0.52!4.88!NR2F2;;chr15:96874063..96874074,+!p10@NR2F2!0.52!4.88!NR2F2;;chr4:81105027..81105039,+!p3@PRDM8!0.52!2.79!PRDM8;;chr10:77161504..77161530,-!p1@ZNF503!0.51!39.03!ZNF503;;chr21:36259445..36259519,-!p4@RUNX1!0.51!7.67!RUNX1;;chr6:10412600..10412637,-!p1@TFAP2A!0.51!4.18!TFAP2A;;chr3:168864315..168864339,-!p2@MECOM!0.51!4.18!MECOM;;chr10:35484804..35484902,+!p2@CREM!0.50!10.46!CREM;;chr12:66218183..66218209,+!p4@HMGA2!0.50!4.88!HMGA2;;chr12:54447599..54447630,+!p3@HOXC4!0.50!2.79!HOXC4;;chr4:2263809..2263854,-!p1@MXD4!0.49!108.74!MXD4;;chr19:45251943..45252006,+!p1@BCL3!0.49!73.89!BCL3;;chr11:62368696..62368759,-!p4@MTA2!0.49!16.73!MTA2;;chr2:66662281..66662308,+!p1@MEIS1!0.49!9.06!MEIS1;;chr4:81104895..81104920,+!p2@PRDM8!0.49!3.49!PRDM8;;chr19:38720294..38720348,-!p1@DPF1!0.49!2.79!DPF1;;chr1:170632137..170632172,+!p10@PRRX1!0.49!2.09!PRRX1;;chr1:170633225..170633230,+!p25@PRRX1!0.49!2.09!PRRX1;;chr2:85981008..85981025,+!p7@ATOH8!0.49!2.09!ATOH8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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000056;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000187;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000192;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000359;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002539;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000947;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001135;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001637;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001981;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002385;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004573;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007798
 |ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
 |fonse_cell_line=

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FF:11210-116A4: Difference between revisions

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Revision as of 14:53, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0