FFCP PHASE1:Hg19::chr8:22014298..22014326,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000148!6.89e-08!10;CL:0000541!6.89e-08!10 | |ontology_enrichment_celltype=CL:0000148!6.89e-08!10;CL:0000541!6.89e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.39e-12;10!CL:0000147;1.11e-08;14!CL:0002567;1.19e-08;3 | |ontology_enrichment_celltype_v019=CL:0000148;1.39e-12;10!CL:0000147;1.11e-08;14!CL:0002567;1.19e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.41e-12,10;CL:0000541,1.41e-12,10;CL:0000147,1.13e-08,14;CL:0002567,1.23e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.83e-23;82!UBERON:0006241;3.74e-09;3!UBERON:0003057;3.74e-09;3!UBERON:0006215;2.26e-08;3!UBERON:0002532;1.07e-07;206!UBERON:0010316;1.07e-07;206 | |ontology_enrichment_development_v019=UBERON:0006601;4.83e-23;82!UBERON:0006241;3.74e-09;3!UBERON:0003057;3.74e-09;3!UBERON:0006215;2.26e-08;3!UBERON:0002532;1.07e-07;206!UBERON:0010316;1.07e-07;206 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-61!115;UBERON:0001049!2.19e-49!57;UBERON:0005068!2.19e-49!57;UBERON:0006241!2.19e-49!57;UBERON:0007135!2.19e-49!57;UBERON:0000955!3.91e-43!69;UBERON:0006238!3.91e-43!69;UBERON:0001017!3.74e-42!82;UBERON:0005743!5.00e-41!86;UBERON:0002616!2.66e-40!59;UBERON:0000073!8.77e-40!94;UBERON:0001016!8.77e-40!94;UBERON:0003080!5.57e-38!42;UBERON:0002780!5.29e-37!41;UBERON:0001890!5.29e-37!41;UBERON:0006240!5.29e-37!41;UBERON:0003075!1.52e-32!86;UBERON:0007284!1.52e-32!86;UBERON:0001893!9.89e-32!34;UBERON:0002020!1.39e-31!34;UBERON:0003528!1.39e-31!34;UBERON:0002791!2.16e-30!33;UBERON:0002346!2.89e-30!90;UBERON:0000153!4.54e-29!129;UBERON:0007811!4.54e-29!129;UBERON:0001869!5.18e-29!32;UBERON:0000033!2.90e-27!123;UBERON:0002619!2.89e-24!22;UBERON:0004121!1.25e-23!169;UBERON:0003056!1.31e-23!61;UBERON:0000924!1.49e-22!173;UBERON:0006601!1.49e-22!173;UBERON:0001950!6.33e-22!20;UBERON:0000956!1.48e-20!25;UBERON:0000203!1.48e-20!25;UBERON:0004111!1.88e-13!241;UBERON:0002308!7.24e-13!9;UBERON:0000125!7.24e-13!9;UBERON:0000025!1.29e-12!194;UBERON:0002420!1.48e-12!9;UBERON:0007245!1.48e-12!9;UBERON:0010009!1.48e-12!9;UBERON:0010011!1.48e-12!9;UBERON:0000454!1.48e-12!9;UBERON:0003076!3.36e-12!15;UBERON:0003057!3.36e-12!15;UBERON:0002298!1.43e-11!8;UBERON:0000475!1.56e-11!365;UBERON:0000477!9.13e-11!286;UBERON:0009663!2.74e-10!7;UBERON:0004732!5.47e-10!13;UBERON:0000062!6.46e-10!511;UBERON:0000064!6.61e-10!219;UBERON:0000200!2.97e-09!6;UBERON:0004733!8.87e-09!12;UBERON:0002028!8.87e-09!12;UBERON:0007277!8.87e-09!12;UBERON:0002021!8.34e-08!5;UBERON:0001872!1.19e-07!5;UBERON:0000349!1.58e-07!5;UBERON:0000483!2.78e-07!309;UBERON:0000119!5.00e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!2.00e-61!115;UBERON:0001049!2.19e-49!57;UBERON:0005068!2.19e-49!57;UBERON:0006241!2.19e-49!57;UBERON:0007135!2.19e-49!57;UBERON:0000955!3.91e-43!69;UBERON:0006238!3.91e-43!69;UBERON:0001017!3.74e-42!82;UBERON:0005743!5.00e-41!86;UBERON:0002616!2.66e-40!59;UBERON:0000073!8.77e-40!94;UBERON:0001016!8.77e-40!94;UBERON:0003080!5.57e-38!42;UBERON:0002780!5.29e-37!41;UBERON:0001890!5.29e-37!41;UBERON:0006240!5.29e-37!41;UBERON:0003075!1.52e-32!86;UBERON:0007284!1.52e-32!86;UBERON:0001893!9.89e-32!34;UBERON:0002020!1.39e-31!34;UBERON:0003528!1.39e-31!34;UBERON:0002791!2.16e-30!33;UBERON:0002346!2.89e-30!90;UBERON:0000153!4.54e-29!129;UBERON:0007811!4.54e-29!129;UBERON:0001869!5.18e-29!32;UBERON:0000033!2.90e-27!123;UBERON:0002619!2.89e-24!22;UBERON:0004121!1.25e-23!169;UBERON:0003056!1.31e-23!61;UBERON:0000924!1.49e-22!173;UBERON:0006601!1.49e-22!173;UBERON:0001950!6.33e-22!20;UBERON:0000956!1.48e-20!25;UBERON:0000203!1.48e-20!25;UBERON:0004111!1.88e-13!241;UBERON:0002308!7.24e-13!9;UBERON:0000125!7.24e-13!9;UBERON:0000025!1.29e-12!194;UBERON:0002420!1.48e-12!9;UBERON:0007245!1.48e-12!9;UBERON:0010009!1.48e-12!9;UBERON:0010011!1.48e-12!9;UBERON:0000454!1.48e-12!9;UBERON:0003076!3.36e-12!15;UBERON:0003057!3.36e-12!15;UBERON:0002298!1.43e-11!8;UBERON:0000475!1.56e-11!365;UBERON:0000477!9.13e-11!286;UBERON:0009663!2.74e-10!7;UBERON:0004732!5.47e-10!13;UBERON:0000062!6.46e-10!511;UBERON:0000064!6.61e-10!219;UBERON:0000200!2.97e-09!6;UBERON:0004733!8.87e-09!12;UBERON:0002028!8.87e-09!12;UBERON:0007277!8.87e-09!12;UBERON:0002021!8.34e-08!5;UBERON:0001872!1.19e-07!5;UBERON:0000349!1.58e-07!5;UBERON:0000483!2.78e-07!309;UBERON:0000119!5.00e-07!312 | ||
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|short_description=p1@LGI3 | |short_description=p1@LGI3 | ||
}} | }} |
Revision as of 04:56, 18 November 2012
Short description: | p1@LGI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LGI3_5end |
Coexpression cluster: | C2076_Melanocyte_corpus_brain_occipital_temporal_postcentral_pons |
Association with transcript: | 17bp_to_NM_139278, uc003xav.2, uc010ltu.2_5end |
EntrezGene: | LGI3 |
HGNC: | 18711 |
UniProt: | Q8N145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.41e-12 | 10 |
melanoblast | 1.41e-12 | 10 |
pigment cell | 1.13e-08 | 14 |
light melanocyte | 1.23e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.