FFCP PHASE1:Hg19::chr20:49348006..49348019,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84612 | |EntrezGene=84612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16245 | |HGNC=16245 | ||
|TSSclassifier=S | |||
|UniProt=Q9BYG5 | |UniProt=Q9BYG5 | ||
|association_with_transcript=-61bp_to_ENST00000371610,NM_032521,uc002xvo.2_5end | |association_with_transcript=-61bp_to_ENST00000371610,NM_032521,uc002xvo.2_5end |
Revision as of 07:05, 9 July 2013
Short description: | p5@PARD6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PARD6B_5end |
Coexpression cluster: | C1871_breast_MCF7_clear_renal_amniotic_leiomyoblastoma_choriocarcinoma |
Association with transcript: | -61bp_to_ENST00000371610, NM_032521, uc002xvo.2_5end |
EntrezGene: | PARD6B |
HGNC: | 16245 |
UniProt: | Q9BYG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@PARD6B |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.74e-11 | 253 |
germ line cell | 7.36e-08 | 7 |
germ cell | 7.36e-08 | 7 |
epithelial cell of gall bladder | 2.16e-07 | 2 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
kidney | 5.50e-11 | 26 |
kidney mesenchyme | 5.50e-11 | 26 |
upper urinary tract | 5.50e-11 | 26 |
kidney rudiment | 5.50e-11 | 26 |
kidney field | 5.50e-11 | 26 |
subdivision of trunk | 6.01e-10 | 112 |
trunk region element | 3.80e-09 | 101 |
cavitated compound organ | 6.87e-09 | 31 |
abdomen element | 9.45e-09 | 54 |
abdominal segment element | 9.45e-09 | 54 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.52e-19 | 106 |
cell type cancer | 2.10e-18 | 143 |
adenocarcinoma | 3.24e-14 | 25 |
cancer | 4.64e-11 | 235 |
disease of cellular proliferation | 1.21e-10 | 239 |
disease of anatomical entity | 3.59e-10 | 39 |
thoracic cancer | 5.42e-09 | 4 |
breast cancer | 5.42e-09 | 4 |
clear cell adenocarcinoma | 1.93e-08 | 2 |
Showing 1 to 9 of 9 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.