FFCP PHASE1:Hg19::chr11:117688216..117688234,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57453|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14656|TSSclassifier=S|UniProt=E9PP71|association_with_transcript=5bp_to_ENST00000525836,uc001pri.1_5end|description=CAGE_peak_2_at_DSCAML1_5end|id=chr11:117688216..117688234,-|ontology_enrichment_celltype=CL:1000507!9.38e-15!12;CL:1000494!9.38e-15!12;CL:1000497!6.07e-13!18;CL:0002518!6.07e-13!18;CL:1000449!2.19e-10!16|ontology_enrichment_celltype_v019=CL:1000507;7.78e-44;10!CL:1000494;7.78e-44;10!CL:1000497;2.45e-31;17!CL:0002518;2.45e-31;17!CL:1000449;9.63e-29;15!CL:0000239;2.52e-17;3!CL:1000615;2.52e-17;3!CL:0002306;2.52e-17;3!CL:0002681;3.45e-16;12!CL:0002584;3.45e-16;12!CL:0000650;6.13e-12;2!CL:1000500;6.13e-12;2!CL:1000618;6.13e-12;2!CL:1001318;6.13e-12;2!CL:0002173;6.13e-12;2!CL:0000039;9.78e-08;7!CL:0000586;9.78e-08;7|ontology_enrichment_celltype_v019_2=CL:1000507,9.32e-44,10;CL:1000494,9.32e-44,10;CL:1000497,2.80e-31,17;CL:0002518,2.80e-31,17;CL:1000449,1.08e-28,15;CL:0000239,1.80e-17,3;CL:1000615,1.80e-17,3;CL:0002306,1.80e-17,3;CL:0002681,3.75e-16,12;CL:0002584,3.75e-16,12;CL:0000650,9.58e-12,2;CL:1000500,9.58e-12,2;CL:1000618,9.58e-12,2;CL:1001318,9.58e-12,2;CL:0002173,9.58e-12,2;CL:0000039,8.71e-08,7;CL:0000586,8.71e-08,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4929;1.13e-11;2!DOID:6193;2.90e-07;1|ontology_enrichment_disease_v019_2=DOID:4929,1.26e-11,2;DOID:6193,3.17e-07,1|ontology_enrichment_uberon=UBERON:0009773!9.38e-15!12;UBERON:0001231!9.38e-15!12;UBERON:0004810!9.38e-15!12;UBERON:0003887!3.92e-14!21;UBERON:0002113!4.38e-14!27;UBERON:0003918!4.38e-14!27;UBERON:0005095!4.38e-14!27;UBERON:0007687!4.38e-14!27;UBERON:0000489!1.23e-12!32;UBERON:0006555!2.11e-11!17;UBERON:0005103!2.11e-11!17;UBERON:0000083!2.11e-11!17;UBERON:0009201!2.11e-11!17;UBERON:0004819!2.11e-11!17;UBERON:0006553!2.11e-11!17;UBERON:0003074!2.11e-11!17;UBERON:0003060!2.11e-11!17;UBERON:0001008!7.95e-11!45;UBERON:0002553!9.67e-11!70;UBERON:0000080!1.33e-10!18;UBERON:0002120!1.33e-10!18;UBERON:0004875!1.33e-10!18;UBERON:0005721!1.33e-10!18;UBERON:0005754!1.33e-10!18;UBERON:0007297!1.33e-10!18;UBERON:0003886!1.34e-10!63;UBERON:0004211!2.19e-10!16;UBERON:0001285!2.19e-10!16;UBERON:0007684!2.19e-10!16;UBERON:0003220!2.19e-10!16;UBERON:0004208!2.19e-10!16;UBERON:0006554!7.12e-10!44;UBERON:0004876!2.99e-09!20;UBERON:0000058!3.24e-09!26;UBERON:0005172!8.51e-09!55;UBERON:0005173!8.51e-09!55;UBERON:0000464!1.09e-08!104;UBERON:0002417!2.18e-07!61;UBERON:0000916!2.18e-07!61;UBERON:0003103!2.24e-07!69;UBERON:0003064!2.87e-07!37;UBERON:0000466!6.58e-07!126;UBERON:0003135!9.19e-07!11|ontology_enrichment_uberon_v019=UBERON:0004211;7.78e-44;10!UBERON:0009773;7.78e-44;10!UBERON:0001231;7.78e-44;10!UBERON:0004810;7.78e-44;10!UBERON:0002113;1.57e-31;24!UBERON:0011143;1.57e-31;24!UBERON:0006555;9.63e-29;15!UBERON:0004819;9.63e-29;15!UBERON:0001285;9.63e-29;15!UBERON:0007684;9.63e-29;15!UBERON:0000489;1.11e-25;29!UBERON:0006554;9.54e-25;30!UBERON:0001008;9.54e-25;30!UBERON:0006853;2.52e-17;3!UBERON:0007685;2.52e-17;3!UBERON:0004134;2.52e-17;3!UBERON:0001225;3.45e-16;12!UBERON:0008987;3.45e-16;12!UBERON:0001851;7.63e-13;15!UBERON:0000353;7.63e-13;15!UBERON:0003567;6.13e-12;2!UBERON:0003838;6.13e-12;2!UBERON:0003586;6.13e-12;2!UBERON:0005169;6.13e-12;2!UBERON:0002321;6.13e-12;2!UBERON:0005215;6.13e-12;2!UBERON:0002303;6.13e-12;2!UBERON:0002319;6.13e-12;2!UBERON:0005172;3.55e-09;52!UBERON:0005173;3.55e-09;52!UBERON:0002417;5.89e-07;58!UBERON:0000916;5.89e-07;58!UBERON:0000473;8.04e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0004810,9.32e-44,10;UBERON:0002113,7.63e-29,26;UBERON:0003918,7.63e-29,26;UBERON:0011143,7.63e-29,26;UBERON:0005095,7.63e-29,26;UBERON:0007687,7.63e-29,26;UBERON:0004211,1.08e-28,15;UBERON:0009773,1.08e-28,15;UBERON:0001231,1.08e-28,15;UBERON:0001285,1.08e-28,15;UBERON:0007684,1.08e-28,15;UBERON:0004208,1.08e-28,15;UBERON:0006555,8.31e-27,16;UBERON:0004819,8.31e-27,16;UBERON:0000489,8.31e-24,31;UBERON:0006853,1.80e-17,3;UBERON:0007685,1.80e-17,3;UBERON:0004134,1.80e-17,3;UBERON:0001008,4.21e-17,48;UBERON:0001225,3.75e-16,12;UBERON:0008987,3.75e-16,12;UBERON:0006554,6.86e-15,47;UBERON:0001851,8.15e-13,15;UBERON:0000353,8.15e-13,15;UBERON:0005172,1.18e-12,54;UBERON:0005173,1.18e-12,54;UBERON:0003567,9.58e-12,2;UBERON:0003838,9.58e-12,2;UBERON:0003586,9.58e-12,2;UBERON:0005169,9.58e-12,2;UBERON:0002321,9.58e-12,2;UBERON:0005215,9.58e-12,2;UBERON:0002303,9.58e-12,2;UBERON:0002319,9.58e-12,2;UBERON:0002417,3.75e-11,60;UBERON:0000916,3.75e-11,60;UBERON:0003103,1.44e-09,68;UBERON:0005177,5.64e-08,101;UBERON:0000473,7.27e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.57470412614962,0.472264687882075,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0.447830948479849,5.50619232232265,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0.564727018627814,0,0.449446968890169,0.30608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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14656 | |||
|TSSclassifier=S | |||
|UniProt=E9PP71 | |||
|association_with_transcript=5bp_to_ENST00000525836,uc001pri.1_5end | |||
|description=CAGE_peak_2_at_DSCAML1_5end | |||
|id=chr11:117688216..117688234,- | |||
|ontology_enrichment_celltype=CL:1000507!9.38e-15!12;CL:1000494!9.38e-15!12;CL:1000497!6.07e-13!18;CL:0002518!6.07e-13!18;CL:1000449!2.19e-10!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;7.78e-44;10!CL:1000494;7.78e-44;10!CL:1000497;2.45e-31;17!CL:0002518;2.45e-31;17!CL:1000449;9.63e-29;15!CL:0000239;2.52e-17;3!CL:1000615;2.52e-17;3!CL:0002306;2.52e-17;3!CL:0002681;3.45e-16;12!CL:0002584;3.45e-16;12!CL:0000650;6.13e-12;2!CL:1000500;6.13e-12;2!CL:1000618;6.13e-12;2!CL:1001318;6.13e-12;2!CL:0002173;6.13e-12;2!CL:0000039;9.78e-08;7!CL:0000586;9.78e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,9.32e-44,10;CL:1000494,9.32e-44,10;CL:1000497,2.80e-31,17;CL:0002518,2.80e-31,17;CL:1000449,1.08e-28,15;CL:0000239,1.80e-17,3;CL:1000615,1.80e-17,3;CL:0002306,1.80e-17,3;CL:0002681,3.75e-16,12;CL:0002584,3.75e-16,12;CL:0000650,9.58e-12,2;CL:1000500,9.58e-12,2;CL:1000618,9.58e-12,2;CL:1001318,9.58e-12,2;CL:0002173,9.58e-12,2;CL:0000039,8.71e-08,7;CL:0000586,8.71e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;1.13e-11;2!DOID:6193;2.90e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.26e-11,2;DOID:6193,3.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!9.38e-15!12;UBERON:0001231!9.38e-15!12;UBERON:0004810!9.38e-15!12;UBERON:0003887!3.92e-14!21;UBERON:0002113!4.38e-14!27;UBERON:0003918!4.38e-14!27;UBERON:0005095!4.38e-14!27;UBERON:0007687!4.38e-14!27;UBERON:0000489!1.23e-12!32;UBERON:0006555!2.11e-11!17;UBERON:0005103!2.11e-11!17;UBERON:0000083!2.11e-11!17;UBERON:0009201!2.11e-11!17;UBERON:0004819!2.11e-11!17;UBERON:0006553!2.11e-11!17;UBERON:0003074!2.11e-11!17;UBERON:0003060!2.11e-11!17;UBERON:0001008!7.95e-11!45;UBERON:0002553!9.67e-11!70;UBERON:0000080!1.33e-10!18;UBERON:0002120!1.33e-10!18;UBERON:0004875!1.33e-10!18;UBERON:0005721!1.33e-10!18;UBERON:0005754!1.33e-10!18;UBERON:0007297!1.33e-10!18;UBERON:0003886!1.34e-10!63;UBERON:0004211!2.19e-10!16;UBERON:0001285!2.19e-10!16;UBERON:0007684!2.19e-10!16;UBERON:0003220!2.19e-10!16;UBERON:0004208!2.19e-10!16;UBERON:0006554!7.12e-10!44;UBERON:0004876!2.99e-09!20;UBERON:0000058!3.24e-09!26;UBERON:0005172!8.51e-09!55;UBERON:0005173!8.51e-09!55;UBERON:0000464!1.09e-08!104;UBERON:0002417!2.18e-07!61;UBERON:0000916!2.18e-07!61;UBERON:0003103!2.24e-07!69;UBERON:0003064!2.87e-07!37;UBERON:0000466!6.58e-07!126;UBERON:0003135!9.19e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.78e-44;10!UBERON:0009773;7.78e-44;10!UBERON:0001231;7.78e-44;10!UBERON:0004810;7.78e-44;10!UBERON:0002113;1.57e-31;24!UBERON:0011143;1.57e-31;24!UBERON:0006555;9.63e-29;15!UBERON:0004819;9.63e-29;15!UBERON:0001285;9.63e-29;15!UBERON:0007684;9.63e-29;15!UBERON:0000489;1.11e-25;29!UBERON:0006554;9.54e-25;30!UBERON:0001008;9.54e-25;30!UBERON:0006853;2.52e-17;3!UBERON:0007685;2.52e-17;3!UBERON:0004134;2.52e-17;3!UBERON:0001225;3.45e-16;12!UBERON:0008987;3.45e-16;12!UBERON:0001851;7.63e-13;15!UBERON:0000353;7.63e-13;15!UBERON:0003567;6.13e-12;2!UBERON:0003838;6.13e-12;2!UBERON:0003586;6.13e-12;2!UBERON:0005169;6.13e-12;2!UBERON:0002321;6.13e-12;2!UBERON:0005215;6.13e-12;2!UBERON:0002303;6.13e-12;2!UBERON:0002319;6.13e-12;2!UBERON:0005172;3.55e-09;52!UBERON:0005173;3.55e-09;52!UBERON:0002417;5.89e-07;58!UBERON:0000916;5.89e-07;58!UBERON:0000473;8.04e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,9.32e-44,10;UBERON:0002113,7.63e-29,26;UBERON:0003918,7.63e-29,26;UBERON:0011143,7.63e-29,26;UBERON:0005095,7.63e-29,26;UBERON:0007687,7.63e-29,26;UBERON:0004211,1.08e-28,15;UBERON:0009773,1.08e-28,15;UBERON:0001231,1.08e-28,15;UBERON:0001285,1.08e-28,15;UBERON:0007684,1.08e-28,15;UBERON:0004208,1.08e-28,15;UBERON:0006555,8.31e-27,16;UBERON:0004819,8.31e-27,16;UBERON:0000489,8.31e-24,31;UBERON:0006853,1.80e-17,3;UBERON:0007685,1.80e-17,3;UBERON:0004134,1.80e-17,3;UBERON:0001008,4.21e-17,48;UBERON:0001225,3.75e-16,12;UBERON:0008987,3.75e-16,12;UBERON:0006554,6.86e-15,47;UBERON:0001851,8.15e-13,15;UBERON:0000353,8.15e-13,15;UBERON:0005172,1.18e-12,54;UBERON:0005173,1.18e-12,54;UBERON:0003567,9.58e-12,2;UBERON:0003838,9.58e-12,2;UBERON:0003586,9.58e-12,2;UBERON:0005169,9.58e-12,2;UBERON:0002321,9.58e-12,2;UBERON:0005215,9.58e-12,2;UBERON:0002303,9.58e-12,2;UBERON:0002319,9.58e-12,2;UBERON:0002417,3.75e-11,60;UBERON:0000916,3.75e-11,60;UBERON:0003103,1.44e-09,68;UBERON:0005177,5.64e-08,101;UBERON:0000473,7.27e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.57470412614962,0.472264687882075,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0.447830948479849,5.50619232232265,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0.564727018627814,0,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0.661044872784862,0,0,1.76171156811282,4.96955196562797,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,2.59637914923747,1.0447784237956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.580969714347592,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,3.15839729035188,0.693138033939733,2.35304930753057,5.84556898613043,2.42768746453614,0,0,0,0,1.08378575017541,2.00675909541941,3.56826782263054,1.66215201785745,2.46262230194396,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,2.46169610922139,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,7.83517479163909,0,0,0,0.442287822516696,0,7.11650708833493,2.96553453471607,4.49014382873458,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,5.1595809741485,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41753560563109,0,0.458320848023367,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0.86686278029118,2.15063811353492,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0.306345576763462,0,0,0,0,0,0,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63731340893483,0,0,0,0,0.265729680626726,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,6.21077194253165,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.93061915699296,1.91107787795487,0.335566295393377,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,2.19881033490858,0,0.0771741581079447,0,0,1.22574160876953,0,0,0,0,0,0.469919589899268,0.966868319603658,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0.546327859818478,0.506794004045748,2.95767606251747,1.3360870263278,4.96232457488162,0.50141507858475,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.372448285775147,0,0.12729431655633,0.202117188958219,0,0,0.942928742204225,0.143444410785353,0.332660356546013,0,0,0,1.07790242527904,0,0.611207220914332,0,1.33151354837103,0,0.320568492303233 | |||
|short_description=p2@DSCAML1 | |||
}} |
Revision as of 15:56, 10 September 2013
Short description: | p2@DSCAML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DSCAML1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000525836, uc001pri.1_5end |
EntrezGene: | DSCAML1 |
HGNC: | 14656 |
UniProt: | E9PP71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 9.32e-44 | 10 |
nephron tubule epithelial cell | 9.32e-44 | 10 |
kidney cell | 2.80e-31 | 17 |
kidney epithelial cell | 2.80e-31 | 17 |
epithelial cell of nephron | 1.08e-28 | 15 |
brush border epithelial cell | 1.80e-17 | 3 |
kidney cortex tubule cell | 1.80e-17 | 3 |
epithelial cell of proximal tubule | 1.80e-17 | 3 |
kidney cortical cell | 3.75e-16 | 12 |
renal cortical epithelial cell | 3.75e-16 | 12 |
mesangial cell | 9.58e-12 | 2 |
kidney interstitial cell | 9.58e-12 | 2 |
juxtaglomerular complex cell | 9.58e-12 | 2 |
renal interstitial pericyte | 9.58e-12 | 2 |
extraglomerular mesangial cell | 9.58e-12 | 2 |
germ line cell | 8.71e-08 | 7 |
germ cell | 8.71e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.26e-11 | 2 |
epithelioid sarcoma | 3.17e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.