FFCP PHASE1:Hg19::chr12:52300746..52300751,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=94|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=175|TSSclassifier=S|UniProt=|association_with_transcript=54bp_to_ENST00000551576_5end|coexpression_cluster_id=C140|description=CAGE_peak_10_at_ACVRL1_5end|id=chr12:52300746..52300751,+|ontology_enrichment_celltype=CL:0002139!7.40e-42!24;CL:0000115!8.86e-37!35;CL:0000071!2.30e-32!18;CL:0002546!2.30e-32!18;CL:0002078!2.98e-27!44;CL:0000213!6.78e-19!57;CL:0000215!6.78e-19!57;CL:1000413!1.32e-17!9;CL:0000222!2.82e-13!119;CL:0002544!2.78e-12!6;CL:0002543!1.85e-11!6;CL:0005020!5.42e-11!6;CL:0002138!5.42e-11!6;CL:0005022!5.42e-11!6;CL:0002551!1.88e-07!6;CL:1000306!7.56e-07!4;CL:0002547!7.56e-07!4|ontology_enrichment_celltype_v019=CL:0002139;5.10e-92;24!CL:0000071;1.75e-79;18!CL:0000115;6.59e-71;36!CL:1000413;2.59e-52;9!CL:0002078;4.00e-41;45!CL:0002544;2.48e-35;6!CL:0000213;2.75e-29;58!CL:0000215;2.75e-29;58!CL:0002543;1.92e-23;6!CL:0002138;3.25e-15;6!CL:0002545;3.18e-13;2!CL:0000076;7.09e-13;63!CL:0002188;1.59e-11;5!CL:0002551;4.90e-09;6!CL:0002144;1.28e-08;3!CL:1000746;2.34e-08;7!CL:1000612;2.34e-08;7!CL:0002618;2.36e-08;3!CL:0002591;7.08e-07;1|ontology_enrichment_celltype_v019_2=CL:0002139,5.16e-92,24;CL:0000115,1.39e-80,36;CL:0000071,1.26e-79,18;CL:0002546,1.26e-79,18;CL:0002078,1.63e-63,45;CL:1000413,2.46e-52,9;CL:0000213,3.33e-48,58;CL:0000215,3.33e-48,58;CL:0002544,2.15e-35,6;CL:0000222,9.22e-25,121;CL:0002543,1.71e-23,6;CL:0000076,2.56e-20,63;CL:0005020,4.16e-15,6;CL:0002138,4.16e-15,6;CL:0005022,4.16e-15,6;CL:0002545,3.28e-13,2;CL:0002188,1.71e-11,5;CL:0002321,3.43e-09,250;CL:0002551,3.92e-09,6;CL:0002144,1.15e-08,3;CL:1000746,2.46e-08,7;CL:1000612,2.46e-08,7;CL:0002618,2.55e-08,3;CL:0000066,2.50e-07,253;CL:0002591,8.18e-07,1|ontology_enrichment_development_v019=CL:0002546;1.75e-79;18!CL:0005022;3.25e-15;6!CL:0000222;6.83e-09;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!2.30e-32!18;UBERON:0004638!2.30e-32!18;UBERON:0004852!2.30e-32!18;UBERON:0000487!2.37e-25!22;UBERON:0000055!4.43e-25!69;UBERON:0002049!8.07e-22!79;UBERON:0007798!8.07e-22!79;UBERON:0006914!1.41e-21!25;UBERON:0001009!4.17e-20!113;UBERON:0004872!2.76e-19!84;UBERON:0004535!1.01e-18!110;UBERON:0001981!3.36e-18!60;UBERON:0007500!3.36e-18!60;UBERON:0004537!3.36e-18!60;UBERON:0006965!3.36e-18!60;UBERON:0003915!1.32e-17!9;UBERON:0004700!1.32e-17!9;UBERON:0001917!1.32e-17!9;UBERON:0003914!1.59e-14!118;UBERON:0004111!4.12e-14!241;UBERON:0007023!3.99e-12!115;UBERON:0000025!5.81e-12!194;UBERON:0000483!2.69e-11!309;UBERON:0000119!5.21e-11!312;UBERON:0000477!7.83e-11!286;UBERON:0001473!9.82e-11!8;UBERON:0004536!9.82e-11!8;UBERON:0006558!9.82e-11!8;UBERON:0002465!2.32e-10!10;UBERON:0001637!1.01e-09!42;UBERON:0003509!1.01e-09!42;UBERON:0004572!1.01e-09!42;UBERON:0000947!1.79e-08!21;UBERON:0010191!1.79e-08!21;UBERON:0000468!1.94e-07!659;UBERON:0000467!2.10e-07!625;UBERON:0000480!2.38e-07!626;UBERON:0001638!2.77e-07!9;UBERON:0003920!2.77e-07!9;UBERON:0004582!2.77e-07!9;UBERON:0000415!7.56e-07!4;UBERON:0007240!7.56e-07!4;UBERON:0005742!7.56e-07!4;UBERON:0005734!7.56e-07!4;UBERON:0004664!7.56e-07!4;UBERON:0004663!7.56e-07!4;UBERON:0007100!9.85e-07!27|ontology_enrichment_uberon_v019=UBERON:0004638;1.75e-79;18!UBERON:0001986;1.75e-79;18!UBERON:0004852;1.75e-79;18!UBERON:0000487;2.01e-64;22!UBERON:0006914;2.74e-56;25!UBERON:0003915;2.59e-52;9!UBERON:0004700;2.59e-52;9!UBERON:0001917;2.59e-52;9!UBERON:0000490;1.43e-38;33!UBERON:0000055;2.60e-19;65!UBERON:0007500;1.42e-17;56!UBERON:0001981;1.42e-17;56!UBERON:0004537;1.42e-17;56!UBERON:0001638;1.39e-15;9!UBERON:0003920;1.39e-15;9!UBERON:0004582;1.39e-15;9!UBERON:0005800;3.18e-13;2!UBERON:0001515;3.18e-13;2!UBERON:0002049;3.61e-13;75!UBERON:0007798;3.61e-13;75!UBERON:0003914;6.50e-12;74!UBERON:0001473;1.88e-11;8!UBERON:0004536;1.88e-11;8!UBERON:0006558;1.88e-11;8!UBERON:0001637;2.11e-11;42!UBERON:0003509;2.11e-11;42!UBERON:0004572;2.11e-11;42!UBERON:0000025;1.33e-10;93!UBERON:0000947;1.07e-09;21!UBERON:0010191;1.07e-09;21!UBERON:0004535;2.85e-09;109!UBERON:0002465;3.45e-09;10!UBERON:0001009;3.92e-09;112!UBERON:0010523;1.28e-08;3!UBERON:0001915;1.28e-08;3!UBERON:0001982;1.28e-08;3!UBERON:0000074;2.34e-08;7!UBERON:0001229;2.34e-08;7!UBERON:0004111;2.95e-08;130!UBERON:0002134;2.44e-07;1!UBERON:0005208;2.44e-07;1!UBERON:0004145;2.44e-07;1!UBERON:0005946;2.44e-07;1!UBERON:0005965;2.44e-07;1!UBERON:0002078;2.44e-07;1!UBERON:0002171;3.60e-07;1!UBERON:0006518;3.60e-07;1!UBERON:0008949;3.60e-07;1!UBERON:0000101;3.60e-07;1!UBERON:0002167;3.60e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.26e-79,18;UBERON:0001986,1.26e-79,18;UBERON:0004852,1.26e-79,18;UBERON:0000487,1.54e-64,22;UBERON:0006914,2.17e-56,25;UBERON:0003915,2.46e-52,9;UBERON:0004700,2.46e-52,9;UBERON:0001917,2.46e-52,9;UBERON:0000055,1.87e-36,68;UBERON:0002049,3.50e-31,78;UBERON:0007798,3.50e-31,78;UBERON:0007500,4.02e-28,59;UBERON:0001981,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0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0|short_description=p10@ACVRL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=94 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=175 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=54bp_to_ENST00000551576_5end | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_10_at_ACVRL1_5end | |||
|id=chr12:52300746..52300751,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.40e-42!24;CL:0000115!8.86e-37!35;CL:0000071!2.30e-32!18;CL:0002546!2.30e-32!18;CL:0002078!2.98e-27!44;CL:0000213!6.78e-19!57;CL:0000215!6.78e-19!57;CL:1000413!1.32e-17!9;CL:0000222!2.82e-13!119;CL:0002544!2.78e-12!6;CL:0002543!1.85e-11!6;CL:0005020!5.42e-11!6;CL:0002138!5.42e-11!6;CL:0005022!5.42e-11!6;CL:0002551!1.88e-07!6;CL:1000306!7.56e-07!4;CL:0002547!7.56e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.10e-92;24!CL:0000071;1.75e-79;18!CL:0000115;6.59e-71;36!CL:1000413;2.59e-52;9!CL:0002078;4.00e-41;45!CL:0002544;2.48e-35;6!CL:0000213;2.75e-29;58!CL:0000215;2.75e-29;58!CL:0002543;1.92e-23;6!CL:0002138;3.25e-15;6!CL:0002545;3.18e-13;2!CL:0000076;7.09e-13;63!CL:0002188;1.59e-11;5!CL:0002551;4.90e-09;6!CL:0002144;1.28e-08;3!CL:1000746;2.34e-08;7!CL:1000612;2.34e-08;7!CL:0002618;2.36e-08;3!CL:0002591;7.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.16e-92,24;CL:0000115,1.39e-80,36;CL:0000071,1.26e-79,18;CL:0002546,1.26e-79,18;CL:0002078,1.63e-63,45;CL:1000413,2.46e-52,9;CL:0000213,3.33e-48,58;CL:0000215,3.33e-48,58;CL:0002544,2.15e-35,6;CL:0000222,9.22e-25,121;CL:0002543,1.71e-23,6;CL:0000076,2.56e-20,63;CL:0005020,4.16e-15,6;CL:0002138,4.16e-15,6;CL:0005022,4.16e-15,6;CL:0002545,3.28e-13,2;CL:0002188,1.71e-11,5;CL:0002321,3.43e-09,250;CL:0002551,3.92e-09,6;CL:0002144,1.15e-08,3;CL:1000746,2.46e-08,7;CL:1000612,2.46e-08,7;CL:0002618,2.55e-08,3;CL:0000066,2.50e-07,253;CL:0002591,8.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002546;1.75e-79;18!CL:0005022;3.25e-15;6!CL:0000222;6.83e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.30e-32!18;UBERON:0004638!2.30e-32!18;UBERON:0004852!2.30e-32!18;UBERON:0000487!2.37e-25!22;UBERON:0000055!4.43e-25!69;UBERON:0002049!8.07e-22!79;UBERON:0007798!8.07e-22!79;UBERON:0006914!1.41e-21!25;UBERON:0001009!4.17e-20!113;UBERON:0004872!2.76e-19!84;UBERON:0004535!1.01e-18!110;UBERON:0001981!3.36e-18!60;UBERON:0007500!3.36e-18!60;UBERON:0004537!3.36e-18!60;UBERON:0006965!3.36e-18!60;UBERON:0003915!1.32e-17!9;UBERON:0004700!1.32e-17!9;UBERON:0001917!1.32e-17!9;UBERON:0003914!1.59e-14!118;UBERON:0004111!4.12e-14!241;UBERON:0007023!3.99e-12!115;UBERON:0000025!5.81e-12!194;UBERON:0000483!2.69e-11!309;UBERON:0000119!5.21e-11!312;UBERON:0000477!7.83e-11!286;UBERON:0001473!9.82e-11!8;UBERON:0004536!9.82e-11!8;UBERON:0006558!9.82e-11!8;UBERON:0002465!2.32e-10!10;UBERON:0001637!1.01e-09!42;UBERON:0003509!1.01e-09!42;UBERON:0004572!1.01e-09!42;UBERON:0000947!1.79e-08!21;UBERON:0010191!1.79e-08!21;UBERON:0000468!1.94e-07!659;UBERON:0000467!2.10e-07!625;UBERON:0000480!2.38e-07!626;UBERON:0001638!2.77e-07!9;UBERON:0003920!2.77e-07!9;UBERON:0004582!2.77e-07!9;UBERON:0000415!7.56e-07!4;UBERON:0007240!7.56e-07!4;UBERON:0005742!7.56e-07!4;UBERON:0005734!7.56e-07!4;UBERON:0004664!7.56e-07!4;UBERON:0004663!7.56e-07!4;UBERON:0007100!9.85e-07!27 | |||
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|phase1_expression=0.726713517082227,0,0,0,0,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,2.98143611050058,6.881876760849,10.0670745466202,1.13061588384802,2.51699661725944,7.15306909044175,6.47884396264113,1.03366703667732,0.35576626268671,1.33888245105868,3.62546385398232,0.760272105718513,1.46437234528902,4.04429388380456,11.3419872703446,0.625098097988558,1.57170560838319,1.0135033243499,1.53316637465883,2.84779697870439,2.5648244150257,0,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.622422070799533,1.0776853765575,0.653847612453835,0,0,0,2.80944069147288,1.71141546463335,1.34503812496621,0,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,2.31492756288305,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,1.04007436911366,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,5.68666920354483,6.29346709523108,0.863663664408557,6.16909010761157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0,0.95460974377781,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,4.30723814746088,0,0.858452096273142,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,1.81538601365081,0.157204305099666,2.89967338743037,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.302461847526478,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p10@ACVRL1 | |||
}} |
Revision as of 23:04, 10 September 2013
Short description: | p10@ACVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_ACVRL1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 54bp_to_ENST00000551576_5end |
EntrezGene: | ACVRL1 |
HGNC: | 175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.16e-92 | 24 |
endothelial cell | 1.39e-80 | 36 |
blood vessel endothelial cell | 1.26e-79 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.26e-79 | 18 |
meso-epithelial cell | 1.63e-63 | 45 |
endothelial cell of artery | 2.46e-52 | 9 |
lining cell | 3.33e-48 | 58 |
barrier cell | 3.33e-48 | 58 |
aortic endothelial cell | 2.15e-35 | 6 |
mesodermal cell | 9.22e-25 | 121 |
vein endothelial cell | 1.71e-23 | 6 |
squamous epithelial cell | 2.56e-20 | 63 |
lymphangioblast | 4.16e-15 | 6 |
endothelial cell of lymphatic vessel | 4.16e-15 | 6 |
vascular lymphangioblast | 4.16e-15 | 6 |
thoracic aorta endothelial cell | 3.28e-13 | 2 |
glomerular endothelial cell | 1.71e-11 | 5 |
embryonic cell | 3.43e-09 | 250 |
fibroblast of dermis | 3.92e-09 | 6 |
capillary endothelial cell | 1.15e-08 | 3 |
glomerular cell | 2.46e-08 | 7 |
kidney corpuscule cell | 2.46e-08 | 7 |
endothelial cell of umbilical vein | 2.55e-08 | 3 |
epithelial cell | 2.50e-07 | 253 |
smooth muscle cell of the pulmonary artery | 8.18e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.