FFCP PHASE1:Hg19::chr14:61943801..61943855,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5583|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9403|TSSclassifier=S|UniProt=|association_with_transcript=-29bp_to_ENST00000536400,uc010tsb.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_2_at_PRKCH_5end|id=chr14:61943801..61943855,+|ontology_enrichment_celltype=CL:0000738!9.40e-34!140;CL:0000860!5.19e-29!45;CL:0002057!2.01e-28!42;CL:0002087!7.73e-26!119;CL:0000766!9.04e-26!76;CL:0002031!1.53e-24!124;CL:0000037!4.27e-21!172;CL:0000566!4.27e-21!172;CL:0000988!3.19e-19!182;CL:0000557!4.66e-19!71;CL:0000839!6.04e-19!70;CL:0002194!2.74e-18!63;CL:0000576!2.74e-18!63;CL:0000040!2.74e-18!63;CL:0000559!2.74e-18!63;CL:0002032!5.32e-18!165;CL:0000837!5.32e-18!165;CL:0002009!9.92e-18!65;CL:0002320!1.50e-13!365;CL:0000134!3.86e-13!358;CL:0000048!6.99e-12!430;CL:0000763!3.05e-11!112;CL:0000049!3.05e-11!112;CL:0000723!8.10e-11!436;CL:0000034!8.49e-11!444;CL:0000791!4.70e-09!18;CL:0000789!4.70e-09!18;CL:0002420!4.70e-09!18;CL:0002419!4.70e-09!18;CL:0000790!4.70e-09!18;CL:0000219!8.05e-08!390;CL:0000094!1.50e-07!8;CL:0000542!4.86e-07!53;CL:0000051!4.86e-07!53;CL:0000838!4.94e-07!52|ontology_enrichment_celltype_v019=CL:0000860;2.92e-37;33!CL:0002057;2.92e-37;33!CL:0000473;1.53e-29;39!CL:0000234;1.53e-29;39!CL:0000576;5.73e-23;48!CL:0000766;1.44e-20;69!CL:0002087;5.96e-13;104!CL:0000791;6.43e-12;18!CL:0000789;6.43e-12;18!CL:0002419;6.43e-12;18!CL:0000094;6.70e-12;8!CL:0000738;5.69e-11;136!CL:0000763;1.30e-08;100!CL:0002393;2.45e-08;6!CL:0002397;2.45e-08;6!CL:0000081;5.13e-08;11!CL:0000624;5.40e-08;6!CL:0000084;2.14e-07;25!CL:0000625;6.42e-07;11!CL:0000219;7.28e-07;193|ontology_enrichment_celltype_v019_2=CL:0000738,1.39e-53,136;CL:0000766,1.95e-44,72;CL:0000860,2.48e-43,42;CL:0002057,2.48e-43,42;CL:0000473,3.35e-42,48;CL:0000234,3.35e-42,48;CL:0002087,5.06e-42,115;CL:0002031,8.32e-40,120;CL:0000037,1.23e-37,168;CL:0000988,3.16e-34,177;CL:0000839,3.40e-33,66;CL:0002032,5.92e-33,161;CL:0000837,5.92e-33,161;CL:0000557,1.91e-32,67;CL:0002194,2.69e-32,59;CL:0000576,2.69e-32,59;CL:0000040,2.69e-32,59;CL:0000559,2.69e-32,59;CL:0002009,1.01e-30,61;CL:0000763,4.63e-23,108;CL:0000049,4.63e-23,108;CL:0000134,7.50e-16,354;CL:0002320,1.93e-15,361;CL:0000791,3.08e-12,18;CL:0000789,3.08e-12,18;CL:0002420,3.08e-12,18;CL:0002419,3.08e-12,18;CL:0000790,3.08e-12,18;CL:0000094,6.87e-12,8;CL:0000219,8.87e-12,386;CL:0000048,1.17e-11,427;CL:0000034,2.40e-11,441;CL:0000723,4.64e-11,433;CL:0000838,1.59e-09,52;CL:0000542,3.35e-09,53;CL:0000051,3.35e-09,53;CL:0000081,5.21e-08,11;CL:0000624,5.49e-08,6;CL:0000084,1.33e-07,25;CL:0000827,1.33e-07,25;CL:0000625,3.19e-07,11|ontology_enrichment_development_v019=CL:0002057;1.75e-31;42!CL:0000790;6.43e-12;18!CL:0000049;3.73e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.53e-23!102;UBERON:0003061!1.53e-23!102;UBERON:0002193!2.18e-23!112;UBERON:0002371!5.95e-19!80;UBERON:0002405!4.15e-16!115;UBERON:0001474!4.42e-16!86;UBERON:0004765!1.28e-13!101;UBERON:0001434!1.28e-13!101;UBERON:0002384!1.27e-12!375;UBERON:0003081!5.86e-12!216;UBERON:0002204!1.70e-09!167|ontology_enrichment_uberon_v019=UBERON:0000178;3.89e-08;15!UBERON:0000179;3.89e-08;15!UBERON:0000463;3.89e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.40e-37,98;UBERON:0003061,8.40e-37,98;UBERON:0002193,5.99e-35,108;UBERON:0002371,8.05e-31,76;UBERON:0002405,1.09e-27,93;UBERON:0001474,2.82e-27,82;UBERON:0004765,2.31e-24,90;UBERON:0001434,3.28e-20,100;UBERON:0003081,1.50e-16,203;UBERON:0002384,3.52e-14,371;UBERON:0002204,2.62e-10,167;UBERON:0000178,3.74e-08,15;UBERON:0000179,3.74e-08,15;UBERON:0000463,3.74e-08,15;UBERON:0000926,7.85e-08,315;UBERON:0004120,7.85e-08,315;UBERON:0006603,7.85e-08,315|phase1_expression=0.54503513781167,0,1.12763523276777,0,0,0,0,0,0,1.47440361900905,0,0,0,1.36142988256051,0.662794751455832,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,90.4737836752479,52.5846275393181,50.0056078310925,0.919421224478927,0,0,1.16200800870452,0.853015394924529,0.880801318004542,309.129437960788,189.715047306754,126.08331588591,0.223915474239924,0,0,7.56070841653736,4.91238726795452,4.36651310138069,34.8643555358527,19.7360586250476,117.998127311034,72.2107904728598,53.2814269580529,246.414483543906,109.629126474245,132.969844818268,158.44898931538,43.2957380947991,31.3842072566523,59.5517233779474,312.205570218321,206.357364409928,228.243353910258,6.59702600373432,9.77371922345996,11.08184351385,228.975089277953,69.2209974123191,89.0635816063672,42.7122730936464,39.1112188815151,186.130839912285,43.5887641896025,121.899897511884,105.381975017815,3.80259515361495,4.67729459923096,11.5312255029607,20.1068249752226,14.2668048199431,19.7692471637409,0.570025487482497,0.59675003159727,0.547992461293902,0,1.09227722252426,1.77901850772711,3.84057200309856,3.60356388332411,1.72425731986345,0.661044872784862,0.954053754535364,4.55370375287559,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000536400,uc010tsb.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_PRKCH_5end | |||
|id=chr14:61943801..61943855,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.40e-34!140;CL:0000860!5.19e-29!45;CL:0002057!2.01e-28!42;CL:0002087!7.73e-26!119;CL:0000766!9.04e-26!76;CL:0002031!1.53e-24!124;CL:0000037!4.27e-21!172;CL:0000566!4.27e-21!172;CL:0000988!3.19e-19!182;CL:0000557!4.66e-19!71;CL:0000839!6.04e-19!70;CL:0002194!2.74e-18!63;CL:0000576!2.74e-18!63;CL:0000040!2.74e-18!63;CL:0000559!2.74e-18!63;CL:0002032!5.32e-18!165;CL:0000837!5.32e-18!165;CL:0002009!9.92e-18!65;CL:0002320!1.50e-13!365;CL:0000134!3.86e-13!358;CL:0000048!6.99e-12!430;CL:0000763!3.05e-11!112;CL:0000049!3.05e-11!112;CL:0000723!8.10e-11!436;CL:0000034!8.49e-11!444;CL:0000791!4.70e-09!18;CL:0000789!4.70e-09!18;CL:0002420!4.70e-09!18;CL:0002419!4.70e-09!18;CL:0000790!4.70e-09!18;CL:0000219!8.05e-08!390;CL:0000094!1.50e-07!8;CL:0000542!4.86e-07!53;CL:0000051!4.86e-07!53;CL:0000838!4.94e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.92e-37;33!CL:0002057;2.92e-37;33!CL:0000473;1.53e-29;39!CL:0000234;1.53e-29;39!CL:0000576;5.73e-23;48!CL:0000766;1.44e-20;69!CL:0002087;5.96e-13;104!CL:0000791;6.43e-12;18!CL:0000789;6.43e-12;18!CL:0002419;6.43e-12;18!CL:0000094;6.70e-12;8!CL:0000738;5.69e-11;136!CL:0000763;1.30e-08;100!CL:0002393;2.45e-08;6!CL:0002397;2.45e-08;6!CL:0000081;5.13e-08;11!CL:0000624;5.40e-08;6!CL:0000084;2.14e-07;25!CL:0000625;6.42e-07;11!CL:0000219;7.28e-07;193 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.75e-31;42!CL:0000790;6.43e-12;18!CL:0000049;3.73e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-23!102;UBERON:0003061!1.53e-23!102;UBERON:0002193!2.18e-23!112;UBERON:0002371!5.95e-19!80;UBERON:0002405!4.15e-16!115;UBERON:0001474!4.42e-16!86;UBERON:0004765!1.28e-13!101;UBERON:0001434!1.28e-13!101;UBERON:0002384!1.27e-12!375;UBERON:0003081!5.86e-12!216;UBERON:0002204!1.70e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.89e-08;15!UBERON:0000179;3.89e-08;15!UBERON:0000463;3.89e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.40e-37,98;UBERON:0003061,8.40e-37,98;UBERON:0002193,5.99e-35,108;UBERON:0002371,8.05e-31,76;UBERON:0002405,1.09e-27,93;UBERON:0001474,2.82e-27,82;UBERON:0004765,2.31e-24,90;UBERON:0001434,3.28e-20,100;UBERON:0003081,1.50e-16,203;UBERON:0002384,3.52e-14,371;UBERON:0002204,2.62e-10,167;UBERON:0000178,3.74e-08,15;UBERON:0000179,3.74e-08,15;UBERON:0000463,3.74e-08,15;UBERON:0000926,7.85e-08,315;UBERON:0004120,7.85e-08,315;UBERON:0006603,7.85e-08,315 | |||
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| |||
|short_description=p2@PRKCH | |||
}} |
Revision as of 05:01, 11 September 2013
Short description: | p2@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PRKCH_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -29bp_to_ENST00000536400, uc010tsb.1_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.40e-37 | 98 |
blood island | 8.40e-37 | 98 |
hemolymphoid system | 5.99e-35 | 108 |
bone marrow | 8.05e-31 | 76 |
immune system | 1.09e-27 | 93 |
bone element | 2.82e-27 | 82 |
skeletal element | 2.31e-24 | 90 |
skeletal system | 3.28e-20 | 100 |
lateral plate mesoderm | 1.50e-16 | 203 |
connective tissue | 3.52e-14 | 371 |
musculoskeletal system | 2.62e-10 | 167 |
blood | 3.74e-08 | 15 |
haemolymphatic fluid | 3.74e-08 | 15 |
organism substance | 3.74e-08 | 15 |
mesoderm | 7.85e-08 | 315 |
mesoderm-derived structure | 7.85e-08 | 315 |
presumptive mesoderm | 7.85e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.