FFCP PHASE1:Hg19::chr17:7751029..7751046,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23135|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=29012|TSSclassifier=S|UniProt=|association_with_transcript=165bp_to_uc002gix.2_5end|coexpression_cluster_id=C17|description=CAGE_peak_12_at_KDM6B_5end|id=chr17:7751029..7751046,+|ontology_enrichment_celltype=CL:0002057!8.38e-20!42;CL:0000766!6.39e-18!76;CL:0000860!7.73e-18!45;CL:0000557!1.20e-13!71;CL:0000839!6.92e-13!70;CL:0000738!1.20e-12!140;CL:0002009!3.16e-11!65;CL:0002194!8.23e-11!63;CL:0000576!8.23e-11!63;CL:0000040!8.23e-11!63;CL:0000559!8.23e-11!63;CL:0000763!2.13e-10!112;CL:0000049!2.13e-10!112;CL:0002031!7.15e-09!124;CL:0000037!1.24e-08!172;CL:0000566!1.24e-08!172;CL:0000988!1.77e-08!182;CL:0002032!6.93e-08!165;CL:0000837!6.93e-08!165;CL:0002087!1.56e-07!119;CL:0000094!9.01e-07!8|ontology_enrichment_celltype_v019=CL:0000860;2.31e-46;33!CL:0002057;2.31e-46;33!CL:0000473;2.56e-33;39!CL:0000234;2.56e-33;39!CL:0000771;1.84e-24;2!CL:0000094;4.65e-24;8!CL:0000766;9.44e-24;69!CL:0000576;1.00e-20;48!CL:0000081;1.37e-17;11!CL:0000775;4.52e-17;3!CL:0000763;9.93e-13;100!CL:0002087;1.70e-08;104|ontology_enrichment_celltype_v019_2=CL:0000766,2.79e-44,72;CL:0000860,4.03e-38,42;CL:0002057,4.03e-38,42;CL:0000473,3.52e-33,48;CL:0000234,3.52e-33,48;CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0000839,1.21e-27,66;CL:0000557,3.26e-27,67;CL:0002194,2.96e-26,59;CL:0000576,2.96e-26,59;CL:0000040,2.96e-26,59;CL:0000559,2.96e-26,59;CL:0002009,2.32e-25,61;CL:0000771,1.64e-24,2;CL:0000094,4.39e-24,8;CL:0000738,9.52e-23,136;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000081,1.31e-17,11;CL:0000775,4.52e-17,3;CL:0000988,4.61e-17,177;CL:0002031,1.46e-14,120;CL:0002087,7.82e-13,115;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361|ontology_enrichment_development_v019=CL:0002057;8.09e-28;42!CL:0000049;3.56e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.98e-12!102;UBERON:0003061!8.98e-12!102;UBERON:0002371!5.78e-11!80;UBERON:0001474!5.80e-11!86;UBERON:0002193!1.12e-09!112;UBERON:0004765!1.92e-08!101;UBERON:0001434!1.92e-08!101;UBERON:0002405!2.92e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.63e-24,76;UBERON:0001474,5.30e-22,82;UBERON:0004765,6.36e-20,90;UBERON:0002405,3.11e-19,93;UBERON:0002390,3.53e-18,98;UBERON:0003061,3.53e-18,98;UBERON:0001434,8.74e-18,100;UBERON:0002193,2.35e-16,108;UBERON:0002204,5.41e-10,167;UBERON:0003081,6.62e-08,203;UBERON:0002384,4.69e-07,371|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0.581592955118259,1.13362783106643,0,0.929716147622738,1.23350366406548,0,1.1507695692886,1.7931249457037,0.236482229888585,1.03423704220986,0.645484683583826,1.35426486594342,0.941211697713023,1.63743690034707,0,3.36692281607993,1.92557416245656,3.83602275479425,0.659702600373432,0.398927315243264,0,1.7412554317715,0,1.24564449799115,0.75374599577023,0.521482918420201,0.217188844705117,0,0.736555271975129,0.949387162322653,0,0.212604299965044,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,92.6206887244374,0,0.621984346622316,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0.508189248444927,0,0,0,0,0.749007023947182,14.9580729602012,4.97298616123243,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0.08745999999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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=165bp_to_uc002gix.2_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_12_at_KDM6B_5end | |||
|id=chr17:7751029..7751046,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.38e-20!42;CL:0000766!6.39e-18!76;CL:0000860!7.73e-18!45;CL:0000557!1.20e-13!71;CL:0000839!6.92e-13!70;CL:0000738!1.20e-12!140;CL:0002009!3.16e-11!65;CL:0002194!8.23e-11!63;CL:0000576!8.23e-11!63;CL:0000040!8.23e-11!63;CL:0000559!8.23e-11!63;CL:0000763!2.13e-10!112;CL:0000049!2.13e-10!112;CL:0002031!7.15e-09!124;CL:0000037!1.24e-08!172;CL:0000566!1.24e-08!172;CL:0000988!1.77e-08!182;CL:0002032!6.93e-08!165;CL:0000837!6.93e-08!165;CL:0002087!1.56e-07!119;CL:0000094!9.01e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-46;33!CL:0002057;2.31e-46;33!CL:0000473;2.56e-33;39!CL:0000234;2.56e-33;39!CL:0000771;1.84e-24;2!CL:0000094;4.65e-24;8!CL:0000766;9.44e-24;69!CL:0000576;1.00e-20;48!CL:0000081;1.37e-17;11!CL:0000775;4.52e-17;3!CL:0000763;9.93e-13;100!CL:0002087;1.70e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.79e-44,72;CL:0000860,4.03e-38,42;CL:0002057,4.03e-38,42;CL:0000473,3.52e-33,48;CL:0000234,3.52e-33,48;CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0000839,1.21e-27,66;CL:0000557,3.26e-27,67;CL:0002194,2.96e-26,59;CL:0000576,2.96e-26,59;CL:0000040,2.96e-26,59;CL:0000559,2.96e-26,59;CL:0002009,2.32e-25,61;CL:0000771,1.64e-24,2;CL:0000094,4.39e-24,8;CL:0000738,9.52e-23,136;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000081,1.31e-17,11;CL:0000775,4.52e-17,3;CL:0000988,4.61e-17,177;CL:0002031,1.46e-14,120;CL:0002087,7.82e-13,115;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.09e-28;42!CL:0000049;3.56e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.98e-12!102;UBERON:0003061!8.98e-12!102;UBERON:0002371!5.78e-11!80;UBERON:0001474!5.80e-11!86;UBERON:0002193!1.12e-09!112;UBERON:0004765!1.92e-08!101;UBERON:0001434!1.92e-08!101;UBERON:0002405!2.92e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.63e-24,76;UBERON:0001474,5.30e-22,82;UBERON:0004765,6.36e-20,90;UBERON:0002405,3.11e-19,93;UBERON:0002390,3.53e-18,98;UBERON:0003061,3.53e-18,98;UBERON:0001434,8.74e-18,100;UBERON:0002193,2.35e-16,108;UBERON:0002204,5.41e-10,167;UBERON:0003081,6.62e-08,203;UBERON:0002384,4.69e-07,371 | |||
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|short_description=p12@KDM6B | |||
}} |
Revision as of 16:15, 11 September 2013
Short description: | p12@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 165bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.79e-44 | 72 |
classical monocyte | 4.03e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.03e-38 | 42 |
defensive cell | 3.52e-33 | 48 |
phagocyte | 3.52e-33 | 48 |
myeloid cell | 4.54e-29 | 108 |
common myeloid progenitor | 4.54e-29 | 108 |
myeloid lineage restricted progenitor cell | 1.21e-27 | 66 |
granulocyte monocyte progenitor cell | 3.26e-27 | 67 |
monopoietic cell | 2.96e-26 | 59 |
monocyte | 2.96e-26 | 59 |
monoblast | 2.96e-26 | 59 |
promonocyte | 2.96e-26 | 59 |
macrophage dendritic cell progenitor | 2.32e-25 | 61 |
eosinophil | 1.64e-24 | 2 |
granulocyte | 4.39e-24 | 8 |
leukocyte | 9.52e-23 | 136 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
blood cell | 1.31e-17 | 11 |
neutrophil | 4.52e-17 | 3 |
hematopoietic cell | 4.61e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 1.46e-14 | 120 |
nongranular leukocyte | 7.82e-13 | 115 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.63e-24 | 76 |
bone element | 5.30e-22 | 82 |
skeletal element | 6.36e-20 | 90 |
immune system | 3.11e-19 | 93 |
hematopoietic system | 3.53e-18 | 98 |
blood island | 3.53e-18 | 98 |
skeletal system | 8.74e-18 | 100 |
hemolymphoid system | 2.35e-16 | 108 |
musculoskeletal system | 5.41e-10 | 167 |
lateral plate mesoderm | 6.62e-08 | 203 |
connective tissue | 4.69e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.