FFCP PHASE1:Hg19::chr1:4663749..4663761,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C14|description=CAGE_peak_at_chr1:4663749..4663761,+|id=chr1:4663749..4663761,+|ontology_enrichment_celltype=CL:0000094!9.24e-11!8;CL:0000081!1.89e-07!11|ontology_enrichment_celltype_v019=CL:0000775;1.22e-15;3!CL:0000094;1.57e-15;8!CL:0000764;2.57e-11;2!CL:0000558;2.57e-11;2!CL:0000081;3.11e-11;11!CL:0000097;7.96e-10;5!CL:0000239;1.17e-07;3!CL:1000615;1.17e-07;3!CL:0002306;1.17e-07;3!CL:0000226;2.59e-07;3!CL:0000842;2.59e-07;3|ontology_enrichment_celltype_v019_2=CL:0000775,1.05e-15,3;CL:0000094,1.53e-15,8;CL:0000764,2.57e-11,2;CL:0000765,2.57e-11,2;CL:0000050,2.57e-11,2;CL:0000038,2.57e-11,2;CL:0000558,2.57e-11,2;CL:0000547,2.57e-11,2;CL:0000549,2.57e-11,2;CL:0000550,2.57e-11,2;CL:0000552,2.57e-11,2;CL:0000081,3.04e-11,11;CL:0000097,7.38e-10,5;CL:0002028,7.38e-10,5;CL:0000239,1.13e-07,3;CL:1000615,1.13e-07,3;CL:0002306,1.13e-07,3;CL:0000226,1.99e-07,3;CL:0000842,1.99e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.81e-17!15;UBERON:0000179!1.81e-17!15;UBERON:0000463!1.81e-17!15;UBERON:0007023!7.38e-14!115|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-40;15!UBERON:0000179;1.67e-40;15!UBERON:0000463;1.67e-40;15!UBERON:0002390;8.82e-17;32!UBERON:0002193;1.63e-09;42!UBERON:0006853;1.17e-07;3!UBERON:0007685;1.17e-07;3!UBERON:0004134;1.17e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.24e-40,15;UBERON:0000179,1.24e-40,15;UBERON:0000463,1.24e-40,15;UBERON:0006853,1.13e-07,3;UBERON:0007685,1.13e-07,3;UBERON:0004134,1.13e-07,3;UBERON:0002390,2.15e-07,98;UBERON:0003061,2.15e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,0.383829398097213,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59801951963587,0.661044872784862,0,0,0,0,2.64342657158052,0.560508562981536,2.37045676297569,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,1.24930726552346,0.473554504088034,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803697554556718,1.34717623575702,0.788280363383256,0,0,0.183201743930407,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,3.31724984865235,3.747118788841,4.92345490362882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,5.9832291840805,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.94142780736755,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,3.56826782263054,2.49322802678617,0,3.50815802633495,4.44440266742331,0,0,0,0.103041011647722,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,132.443826009596,114.695581071356,98.5489633811301,32.3995214622593,43.6044009471366,99.2164166124858,115.566727568957,114.210025386375,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,35.922463852041,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,4.23846692266567,1.49590513710141,0,0,0,0,2.70192184266644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0.277349346026277,6.07459084172958,0,0.0870592065804026,1.22308667769421,0,0,0,0,0.0969890164884194,0,0,0.822251547880505,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0,0,0.854299300541557,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,1.31017534008077,0,0,0,0.4133735930023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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr1:4663749..4663761,+ | |||
|id=chr1:4663749..4663761,+ | |||
|ontology_enrichment_celltype=CL:0000094!9.24e-11!8;CL:0000081!1.89e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.22e-15;3!CL:0000094;1.57e-15;8!CL:0000764;2.57e-11;2!CL:0000558;2.57e-11;2!CL:0000081;3.11e-11;11!CL:0000097;7.96e-10;5!CL:0000239;1.17e-07;3!CL:1000615;1.17e-07;3!CL:0002306;1.17e-07;3!CL:0000226;2.59e-07;3!CL:0000842;2.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.05e-15,3;CL:0000094,1.53e-15,8;CL:0000764,2.57e-11,2;CL:0000765,2.57e-11,2;CL:0000050,2.57e-11,2;CL:0000038,2.57e-11,2;CL:0000558,2.57e-11,2;CL:0000547,2.57e-11,2;CL:0000549,2.57e-11,2;CL:0000550,2.57e-11,2;CL:0000552,2.57e-11,2;CL:0000081,3.04e-11,11;CL:0000097,7.38e-10,5;CL:0002028,7.38e-10,5;CL:0000239,1.13e-07,3;CL:1000615,1.13e-07,3;CL:0002306,1.13e-07,3;CL:0000226,1.99e-07,3;CL:0000842,1.99e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.81e-17!15;UBERON:0000179!1.81e-17!15;UBERON:0000463!1.81e-17!15;UBERON:0007023!7.38e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-40;15!UBERON:0000179;1.67e-40;15!UBERON:0000463;1.67e-40;15!UBERON:0002390;8.82e-17;32!UBERON:0002193;1.63e-09;42!UBERON:0006853;1.17e-07;3!UBERON:0007685;1.17e-07;3!UBERON:0004134;1.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.24e-40,15;UBERON:0000179,1.24e-40,15;UBERON:0000463,1.24e-40,15;UBERON:0006853,1.13e-07,3;UBERON:0007685,1.13e-07,3;UBERON:0004134,1.13e-07,3;UBERON:0002390,2.15e-07,98;UBERON:0003061,2.15e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,0.383829398097213,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59801951963587,0.661044872784862,0,0,0,0,2.64342657158052,0.560508562981536,2.37045676297569,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,1.24930726552346,0.473554504088034,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803697554556718,1.34717623575702,0.788280363383256,0,0,0.183201743930407,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,3.31724984865235,3.747118788841,4.92345490362882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,5.9832291840805,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.94142780736755,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,3.56826782263054,2.49322802678617,0,3.50815802633495,4.44440266742331,0,0,0,0.103041011647722,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,132.443826009596,114.695581071356,98.5489633811301,32.3995214622593,43.6044009471366,99.2164166124858,115.566727568957,114.210025386375,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,35.922463852041,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,4.23846692266567,1.49590513710141,0,0,0,0,2.70192184266644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0.277349346026277,6.07459084172958,0,0.0870592065804026,1.22308667769421,0,0,0,0,0.0969890164884194,0,0,0.822251547880505,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0,0,0.854299300541557,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,1.31017534008077,0,0,0,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.354809480650555,0,0,0,0.197318320688547,0,0,0,0,0,0,3.45484145949794,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,7.10231292486555,0,0,1.11855431797792,0.588901401691458,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0,1.23345048838675,0.445530107947154,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p@chr1:4663749..4663761,+ | |||
}} |
Revision as of 05:57, 12 September 2013
Short description: | p@chr1:4663749..4663761, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:4663749..4663761, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.05e-15 | 3 |
granulocyte | 1.53e-15 | 8 |
erythroid lineage cell | 2.57e-11 | 2 |
erythroblast | 2.57e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 2.57e-11 | 2 |
erythroid progenitor cell | 2.57e-11 | 2 |
reticulocyte | 2.57e-11 | 2 |
proerythroblast | 2.57e-11 | 2 |
basophilic erythroblast | 2.57e-11 | 2 |
polychromatophilic erythroblast | 2.57e-11 | 2 |
orthochromatic erythroblast | 2.57e-11 | 2 |
blood cell | 3.04e-11 | 11 |
mast cell | 7.38e-10 | 5 |
basophil mast progenitor cell | 7.38e-10 | 5 |
brush border epithelial cell | 1.13e-07 | 3 |
kidney cortex tubule cell | 1.13e-07 | 3 |
epithelial cell of proximal tubule | 1.13e-07 | 3 |
single nucleate cell | 1.99e-07 | 3 |
mononuclear cell | 1.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.24e-40 | 15 |
haemolymphatic fluid | 1.24e-40 | 15 |
organism substance | 1.24e-40 | 15 |
renal cortex tubule | 1.13e-07 | 3 |
region of nephron tubule | 1.13e-07 | 3 |
proximal tubule | 1.13e-07 | 3 |
hematopoietic system | 2.15e-07 | 98 |
blood island | 2.15e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.