FFCP PHASE1:Hg19::chr1:66797976..66797992,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5142|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8781|TSSclassifier=S|UniProt=Q07343,Q5TEK5|association_with_transcript=183bp_to_NM_001037339,uc001dcq.2_5end|coexpression_cluster_id=C2|description=CAGE_peak_6_at_PDE4B_5end|id=chr1:66797976..66797992,+|ontology_enrichment_celltype=CL:0000738!1.99e-44!140;CL:0002087!8.09e-37!119;CL:0000037!1.62e-33!172;CL:0000566!1.62e-33!172;CL:0002031!9.50e-33!124;CL:0000988!4.77e-31!182;CL:0002032!8.57e-31!165;CL:0000837!8.57e-31!165;CL:0002057!4.35e-27!42;CL:0000766!5.01e-24!76;CL:0000860!2.20e-23!45;CL:0002009!1.03e-21!65;CL:0002194!1.15e-20!63;CL:0000576!1.15e-20!63;CL:0000040!1.15e-20!63;CL:0000559!1.15e-20!63;CL:0000557!2.31e-20!71;CL:0000839!1.55e-17!70;CL:0000763!1.85e-16!112;CL:0000049!1.85e-16!112;CL:0000542!5.56e-14!53;CL:0000051!5.56e-14!53;CL:0000838!7.58e-14!52;CL:0000791!5.86e-09!18;CL:0000789!5.86e-09!18;CL:0002420!5.86e-09!18;CL:0002419!5.86e-09!18;CL:0000790!5.86e-09!18;CL:0002139!1.76e-08!24;CL:0000236!2.15e-07!14;CL:0000134!2.29e-07!358;CL:0000094!4.00e-07!8;CL:0000084!4.73e-07!25;CL:0000827!4.73e-07!25;CL:0000945!4.93e-07!24;CL:0000826!4.93e-07!24;CL:0000071!8.23e-07!18;CL:0002546!8.23e-07!18|ontology_enrichment_celltype_v019=CL:0000860;8.72e-27;33!CL:0002057;8.72e-27;33!CL:0000473;5.25e-21;39!CL:0000234;5.25e-21;39!CL:0000576;1.61e-20;48!CL:0000766;9.21e-15;69!CL:0002087;1.43e-14;104!CL:0000738;2.81e-11;136!CL:0000791;4.63e-11;18!CL:0000789;4.63e-11;18!CL:0002419;4.63e-11;18!CL:0002139;1.41e-10;24!CL:0000542;2.00e-09;53!CL:0000094;6.33e-09;8!CL:0000084;1.02e-08;25!CL:0000236;1.16e-08;13!CL:0000625;2.52e-08;11!CL:0000071;2.83e-08;18!CL:0000988;4.28e-08;177!CL:0000081;5.20e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,1.75e-53,136;CL:0002087,1.05e-43,115;CL:0000037,2.35e-41,168;CL:0000988,7.21e-40,177;CL:0002031,9.68e-39,120;CL:0002032,1.44e-37,161;CL:0000837,1.44e-37,161;CL:0000860,2.66e-35,42;CL:0002057,2.66e-35,42;CL:0000473,1.32e-33,48;CL:0000234,1.32e-33,48;CL:0000766,4.43e-31,72;CL:0002009,1.61e-28,61;CL:0002194,4.05e-27,59;CL:0000576,4.05e-27,59;CL:0000040,4.05e-27,59;CL:0000559,4.05e-27,59;CL:0000557,3.53e-26,67;CL:0000839,6.29e-23,66;CL:0000763,3.89e-22,108;CL:0000049,3.89e-22,108;CL:0000542,3.33e-14,53;CL:0000051,3.33e-14,53;CL:0000838,5.13e-14,52;CL:0000791,4.93e-11,18;CL:0000789,4.93e-11,18;CL:0002420,4.93e-11,18;CL:0002419,4.93e-11,18;CL:0000790,4.93e-11,18;CL:0002139,1.06e-10,24;CL:0000094,6.52e-09,8;CL:0000084,1.12e-08,25;CL:0000827,1.12e-08,25;CL:0000071,1.68e-08,18;CL:0002546,1.68e-08,18;CL:0000625,2.68e-08,11;CL:0000134,5.28e-08,354;CL:0000236,1.06e-07,14;CL:0002393,2.68e-07,9;CL:0002397,2.68e-07,9;CL:0000115,2.88e-07,36;CL:0002320,3.25e-07,361;CL:0000081,5.39e-07,11|ontology_enrichment_development_v019=CL:0002057;2.01e-25;42!CL:0000790;4.63e-11;18!CL:0000051;2.00e-09;53!CL:0002546;2.83e-08;18!CL:0000049;5.39e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.40e-26!112;UBERON:0002390!5.87e-25!102;UBERON:0003061!5.87e-25!102;UBERON:0002371!2.32e-16!80;UBERON:0001474!5.89e-15!86;UBERON:0002405!2.36e-13!115;UBERON:0003081!3.86e-12!216;UBERON:0007023!6.57e-12!115;UBERON:0004765!2.37e-11!101;UBERON:0001434!2.37e-11!101;UBERON:0000178!2.57e-09!15;UBERON:0000179!2.57e-09!15;UBERON:0000463!2.57e-09!15;UBERON:0001986!8.23e-07!18;UBERON:0004638!8.23e-07!18;UBERON:0004852!8.23e-07!18|ontology_enrichment_uberon_v019=UBERON:0000178;8.11e-12;15!UBERON:0000179;8.11e-12;15!UBERON:0000463;8.11e-12;15!UBERON:0004638;2.83e-08;18!UBERON:0001986;2.83e-08;18!UBERON:0004852;2.83e-08;18|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.13e-35,108;UBERON:0002390,1.39e-32,98;UBERON:0003061,1.39e-32,98;UBERON:0002405,4.62e-25,93;UBERON:0002371,1.25e-21,76;UBERON:0001474,4.14e-20,82;UBERON:0003081,4.40e-17,203;UBERON:0004765,1.95e-16,90;UBERON:0001434,2.60e-13,100;UBERON:0000178,8.44e-12,15;UBERON:0000179,8.44e-12,15;UBERON:0000463,8.44e-12,15;UBERON:0004638,1.68e-08,18;UBERON:0001986,1.68e-08,18;UBERON:0004852,1.68e-08,18|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0.687720651731561,0.985207073399349,0.865818594450472,40.5165205154371,40.3020868002073,24.3061313606239,0,0,0,1.47187681102573,2.84338464974843,9.68881449804996,56.5075316702515,62.3693231632141,43.4021741431704,1.11957737119962,2.91504299417082,1.03030227053675,9.74168199823083,6.42389104270976,12.3717871205786,34.1670684251356,31.6599273776806,38.4035899909928,42.5784740636783,26.8968741855556,52.9720194950431,74.8098127198462,74.8762232957238,75.8388324928314,46.3076155274808,54.0354177114535,69.4395566935311,82.3365670477728,107.511224070491,87.5891862344687,30.6761709173646,23.7361752569742,35.8028790447463,99.8319780882329,68.6536121876279,117.090582811168,13.8186765891209,29.203043431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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |||
|TSSclassifier=S | |||
|UniProt=Q07343,Q5TEK5 | |||
|association_with_transcript=183bp_to_NM_001037339,uc001dcq.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_PDE4B_5end | |||
|id=chr1:66797976..66797992,+ | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.40e-26!112;UBERON:0002390!5.87e-25!102;UBERON:0003061!5.87e-25!102;UBERON:0002371!2.32e-16!80;UBERON:0001474!5.89e-15!86;UBERON:0002405!2.36e-13!115;UBERON:0003081!3.86e-12!216;UBERON:0007023!6.57e-12!115;UBERON:0004765!2.37e-11!101;UBERON:0001434!2.37e-11!101;UBERON:0000178!2.57e-09!15;UBERON:0000179!2.57e-09!15;UBERON:0000463!2.57e-09!15;UBERON:0001986!8.23e-07!18;UBERON:0004638!8.23e-07!18;UBERON:0004852!8.23e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.11e-12;15!UBERON:0000179;8.11e-12;15!UBERON:0000463;8.11e-12;15!UBERON:0004638;2.83e-08;18!UBERON:0001986;2.83e-08;18!UBERON:0004852;2.83e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.13e-35,108;UBERON:0002390,1.39e-32,98;UBERON:0003061,1.39e-32,98;UBERON:0002405,4.62e-25,93;UBERON:0002371,1.25e-21,76;UBERON:0001474,4.14e-20,82;UBERON:0003081,4.40e-17,203;UBERON:0004765,1.95e-16,90;UBERON:0001434,2.60e-13,100;UBERON:0000178,8.44e-12,15;UBERON:0000179,8.44e-12,15;UBERON:0000463,8.44e-12,15;UBERON:0004638,1.68e-08,18;UBERON:0001986,1.68e-08,18;UBERON:0004852,1.68e-08,18 | |||
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| |||
|short_description=p6@PDE4B | |||
}} |
Revision as of 06:32, 12 September 2013
Short description: | p6@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PDE4B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 183bp_to_NM_001037339, uc001dcq.2_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | Q07343Q5TEK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.13e-35 | 108 |
hematopoietic system | 1.39e-32 | 98 |
blood island | 1.39e-32 | 98 |
immune system | 4.62e-25 | 93 |
bone marrow | 1.25e-21 | 76 |
bone element | 4.14e-20 | 82 |
lateral plate mesoderm | 4.40e-17 | 203 |
skeletal element | 1.95e-16 | 90 |
skeletal system | 2.60e-13 | 100 |
blood | 8.44e-12 | 15 |
haemolymphatic fluid | 8.44e-12 | 15 |
organism substance | 8.44e-12 | 15 |
blood vessel endothelium | 1.68e-08 | 18 |
endothelium | 1.68e-08 | 18 |
cardiovascular system endothelium | 1.68e-08 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.