FFCP PHASE1:Hg19::chr20:62708461..62708503,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10287|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=13735|TSSclassifier=N|UniProt=|association_with_transcript=-220bp_to_AB590132,DQ891204,DQ894387_5end|coexpression_cluster_id=C92|description=CAGE_peak_7_at_RGS19_5end|id=chr20:62708461..62708503,-|ontology_enrichment_celltype=CL:0000763!1.99e-54!112;CL:0000049!1.99e-54!112;CL:0000037!3.31e-49!172;CL:0000566!3.31e-49!172;CL:0002032!3.88e-45!165;CL:0000837!3.88e-45!165;CL:0000988!6.21e-45!182;CL:0000766!1.08e-44!76;CL:0002057!2.38e-41!42;CL:0000860!1.09e-37!45;CL:0000738!3.07e-34!140;CL:0002194!1.94e-33!63;CL:0000576!1.94e-33!63;CL:0000040!1.94e-33!63;CL:0000559!1.94e-33!63;CL:0000839!2.22e-33!70;CL:0000557!1.08e-32!71;CL:0002009!5.79e-32!65;CL:0002087!9.50e-27!119;CL:0002031!9.27e-24!124;CL:0000094!2.40e-12!8;CL:0000134!5.30e-10!358;CL:0002320!2.24e-09!365;CL:0002393!1.23e-08!9;CL:0002397!1.23e-08!9;CL:0000081!1.99e-08!11;CL:0000219!3.07e-07!390|ontology_enrichment_celltype_v019=CL:0000860;6.98e-24;33!CL:0002057;6.98e-24;33!CL:0000576;1.79e-22;48!CL:0000763;2.54e-17;100!CL:0000473;3.73e-15;39!CL:0000234;3.73e-15;39!CL:0000875;1.14e-14;3!CL:0002396;1.14e-14;3!CL:0000766;5.15e-14;69!CL:0000094;1.30e-13;8!CL:0000771;3.99e-10;2!CL:0000081;8.15e-10;11!CL:0002393;2.22e-07;6!CL:0002397;2.22e-07;6!CL:0000988;6.08e-07;177!CL:0000775;6.90e-07;3|ontology_enrichment_celltype_v019_2=CL:0000763,2.95e-43,108;CL:0000049,2.95e-43,108;CL:0000860,3.63e-40,42;CL:0002057,3.63e-40,42;CL:0000473,1.71e-34,48;CL:0000234,1.71e-34,48;CL:0000766,9.87e-34,72;CL:0002032,4.81e-30,161;CL:0000837,4.81e-30,161;CL:0000037,1.89e-28,168;CL:0000988,1.38e-26,177;CL:0002194,1.47e-26,59;CL:0000576,1.47e-26,59;CL:0000040,1.47e-26,59;CL:0000559,1.47e-26,59;CL:0002009,1.56e-25,61;CL:0000839,3.03e-23,66;CL:0000557,7.93e-23,67;CL:0002393,5.97e-18,9;CL:0002397,5.97e-18,9;CL:0000738,6.30e-18,136;CL:0000875,1.14e-14,3;CL:0002396,1.14e-14,3;CL:0002087,5.55e-14,115;CL:0000094,1.58e-13,8;CL:0002031,3.51e-13,120;CL:0000771,4.27e-10,2;CL:0000081,9.39e-10,11;CL:0000134,3.87e-09,354;CL:0002320,8.42e-09,361;CL:0000219,1.29e-07,386;CL:0000775,6.52e-07,3|ontology_enrichment_development_v019=CL:0002057;1.52e-27;42!CL:0000049;2.27e-14;108|ontology_enrichment_disease=DOID:8692!4.38e-18!31;DOID:1240!1.17e-15!39;DOID:2531!3.29e-13!51;DOID:0060083!3.29e-13!51|ontology_enrichment_disease_v019=DOID:8692;6.65e-11;31!DOID:1240;4.07e-07;39|ontology_enrichment_disease_v019_2=DOID:8692,7.35e-12,31;DOID:1240,4.90e-09,39|ontology_enrichment_uberon=UBERON:0002390!2.08e-38!102;UBERON:0003061!2.08e-38!102;UBERON:0002193!3.46e-33!112;UBERON:0002371!7.72e-29!80;UBERON:0001474!9.48e-26!86;UBERON:0002405!2.45e-21!115;UBERON:0004765!1.08e-19!101;UBERON:0001434!1.08e-19!101;UBERON:0007023!2.01e-11!115;UBERON:0003081!9.02e-11!216;UBERON:0002384!1.55e-08!375;UBERON:0002204!3.58e-07!167;UBERON:0001049!3.98e-07!57;UBERON:0005068!3.98e-07!57;UBERON:0006241!3.98e-07!57;UBERON:0007135!3.98e-07!57;UBERON:0001893!9.74e-07!34;UBERON:0000178!9.86e-07!15;UBERON:0000179!9.86e-07!15;UBERON:0000463!9.86e-07!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.05e-27,98;UBERON:0003061,7.05e-27,98;UBERON:0002193,8.47e-24,108;UBERON:0002371,1.46e-19,76;UBERON:0002405,1.66e-18,93;UBERON:0001474,8.83e-18,82;UBERON:0004765,8.96e-16,90;UBERON:0001434,1.02e-13,100;UBERON:0003081,1.25e-10,203;UBERON:0002384,2.42e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.985207073399349,0.472264687882075,0.786728553697808,0.767658796194425,1.08371286321253,0,0,0,0,0.284338464974843,0.880801318004542,0,0,0.217010870715852,0,0,0.257575567634187,3.78035420826868,5.66813915533214,3.63876091781724,2.32429036905685,0,0.929119112685311,1.7261543539329,0.512321413058201,0.709446689665756,0.344745680736619,0.645484683583826,0,2.63539275359647,1.63743690034707,2.69668181334102,1.83650335422542,2.88836124368484,2.55734850319616,0.989553900560148,1.99463657621632,2.98357325372886,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,0.736555271975129,0.316462387440884,6.97142444829408,9.56719349842696,6.28975936525128,1.12328631146495,1.20141514273205,0.48217676009124,20.5209175493699,23.6710845866917,12.4211624559951,0,0,0,0,0,1.14950487990897,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,5.27121669744253,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.792435906119034,0,0.576479813667846,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10287 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13735 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-220bp_to_AB590132,DQ891204,DQ894387_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_7_at_RGS19_5end | |||
|id=chr20:62708461..62708503,- | |||
|ontology_enrichment_celltype=CL:0000763!1.99e-54!112;CL:0000049!1.99e-54!112;CL:0000037!3.31e-49!172;CL:0000566!3.31e-49!172;CL:0002032!3.88e-45!165;CL:0000837!3.88e-45!165;CL:0000988!6.21e-45!182;CL:0000766!1.08e-44!76;CL:0002057!2.38e-41!42;CL:0000860!1.09e-37!45;CL:0000738!3.07e-34!140;CL:0002194!1.94e-33!63;CL:0000576!1.94e-33!63;CL:0000040!1.94e-33!63;CL:0000559!1.94e-33!63;CL:0000839!2.22e-33!70;CL:0000557!1.08e-32!71;CL:0002009!5.79e-32!65;CL:0002087!9.50e-27!119;CL:0002031!9.27e-24!124;CL:0000094!2.40e-12!8;CL:0000134!5.30e-10!358;CL:0002320!2.24e-09!365;CL:0002393!1.23e-08!9;CL:0002397!1.23e-08!9;CL:0000081!1.99e-08!11;CL:0000219!3.07e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.98e-24;33!CL:0002057;6.98e-24;33!CL:0000576;1.79e-22;48!CL:0000763;2.54e-17;100!CL:0000473;3.73e-15;39!CL:0000234;3.73e-15;39!CL:0000875;1.14e-14;3!CL:0002396;1.14e-14;3!CL:0000766;5.15e-14;69!CL:0000094;1.30e-13;8!CL:0000771;3.99e-10;2!CL:0000081;8.15e-10;11!CL:0002393;2.22e-07;6!CL:0002397;2.22e-07;6!CL:0000988;6.08e-07;177!CL:0000775;6.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.95e-43,108;CL:0000049,2.95e-43,108;CL:0000860,3.63e-40,42;CL:0002057,3.63e-40,42;CL:0000473,1.71e-34,48;CL:0000234,1.71e-34,48;CL:0000766,9.87e-34,72;CL:0002032,4.81e-30,161;CL:0000837,4.81e-30,161;CL:0000037,1.89e-28,168;CL:0000988,1.38e-26,177;CL:0002194,1.47e-26,59;CL:0000576,1.47e-26,59;CL:0000040,1.47e-26,59;CL:0000559,1.47e-26,59;CL:0002009,1.56e-25,61;CL:0000839,3.03e-23,66;CL:0000557,7.93e-23,67;CL:0002393,5.97e-18,9;CL:0002397,5.97e-18,9;CL:0000738,6.30e-18,136;CL:0000875,1.14e-14,3;CL:0002396,1.14e-14,3;CL:0002087,5.55e-14,115;CL:0000094,1.58e-13,8;CL:0002031,3.51e-13,120;CL:0000771,4.27e-10,2;CL:0000081,9.39e-10,11;CL:0000134,3.87e-09,354;CL:0002320,8.42e-09,361;CL:0000219,1.29e-07,386;CL:0000775,6.52e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-27;42!CL:0000049;2.27e-14;108 | |||
|ontology_enrichment_disease=DOID:8692!4.38e-18!31;DOID:1240!1.17e-15!39;DOID:2531!3.29e-13!51;DOID:0060083!3.29e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.65e-11;31!DOID:1240;4.07e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.35e-12,31;DOID:1240,4.90e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-38!102;UBERON:0003061!2.08e-38!102;UBERON:0002193!3.46e-33!112;UBERON:0002371!7.72e-29!80;UBERON:0001474!9.48e-26!86;UBERON:0002405!2.45e-21!115;UBERON:0004765!1.08e-19!101;UBERON:0001434!1.08e-19!101;UBERON:0007023!2.01e-11!115;UBERON:0003081!9.02e-11!216;UBERON:0002384!1.55e-08!375;UBERON:0002204!3.58e-07!167;UBERON:0001049!3.98e-07!57;UBERON:0005068!3.98e-07!57;UBERON:0006241!3.98e-07!57;UBERON:0007135!3.98e-07!57;UBERON:0001893!9.74e-07!34;UBERON:0000178!9.86e-07!15;UBERON:0000179!9.86e-07!15;UBERON:0000463!9.86e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.05e-27,98;UBERON:0003061,7.05e-27,98;UBERON:0002193,8.47e-24,108;UBERON:0002371,1.46e-19,76;UBERON:0002405,1.66e-18,93;UBERON:0001474,8.83e-18,82;UBERON:0004765,8.96e-16,90;UBERON:0001434,1.02e-13,100;UBERON:0003081,1.25e-10,203;UBERON:0002384,2.42e-08,371 | |||
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|short_description=p7@RGS19 | |||
}} |
Revision as of 09:40, 12 September 2013
Short description: | p7@RGS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RGS19_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -220bp_to_AB590132, DQ891204, DQ894387_5end |
EntrezGene: | RGS19 |
HGNC: | 13735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.05e-27 | 98 |
blood island | 7.05e-27 | 98 |
hemolymphoid system | 8.47e-24 | 108 |
bone marrow | 1.46e-19 | 76 |
immune system | 1.66e-18 | 93 |
bone element | 8.83e-18 | 82 |
skeletal element | 8.96e-16 | 90 |
skeletal system | 1.02e-13 | 100 |
lateral plate mesoderm | 1.25e-10 | 203 |
connective tissue | 2.42e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.35e-12 | 31 |
leukemia | 4.90e-09 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.