FFCP PHASE1:Mm9::chr11:70273251..70273269,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66102|HGNC=|MCL_coexpression_id=38|UniProt=|association_with_transcript=64bp_to_ENSMUST00000154475_5end|description=CAGE_peak_8_at_Cxcl16_5end|id=chr11:70273251..70273269,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000473,2.65e-17,7;CL:0002194,7.65e-11,4;CL:0000766,7.65e-11,4;CL:0000234,7.65e-11,4;CL:0000576,7.65e-11,4;CL:0000235,7.65e-11,4;CL:0000864,7.65e-11,4;CL:0002009,7.65e-11,4;CL:0000040,7.65e-11,4;CL:0000559,7.65e-11,4;CL:0002092,6.28e-09,3;CL:0002540,6.28e-09,3;CL:0000068,2.45e-08,3;CL:0002202,2.45e-08,3;CL:0000069,2.45e-08,3;CL:0002632,2.45e-08,3;CL:0002368,2.45e-08,3;CL:0000307,2.45e-08,3;CL:0000377,2.45e-08,3;CL:0000682,4.50e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!9.01e-08!70;UBERON:0002193!2.50e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.45e-08,3;UBERON:0001005,2.45e-08,3;UBERON:0007196,2.45e-08,3;UBERON:0001558,2.45e-08,3;UBERON:0002465,4.50e-08,3;UBERON:0002371,2.91e-07,16;UBERON:0000344,5.24e-07,15|phase1_expression=0,4.53668029931169,7.73498706962211,0,0,0.671517087647559,1.40167584357315,0,0.140788722151667,0.234064526321993,0,0,0,0,0.999329285446988,0,0.699561878128147,0.157731082679119,0,0,0.425216450755349,0,0,3.19984845586813,4.81759490241057,5.16808767703518,3.01533397311352,4.30942465371778,0.570070258369122,0.504060259519861,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,3.04130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,2.57836046138721,0,0,0,0,0,31.9464399634897,43.5101199529469,34.1030455174128,5.39280198933128,3.07374644257244,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.579728977403356,0,0,0,0.649776417447669,0,0.702222100658759,0,0,0,0,0,0,0,4.5463118612355,6.08063677140237,4.04419556011827,0.11418387971906,3.36619248741323,0.148442139064825,0.173485326766136,0,0,0,0,0,0.247194967734374,0.433798070759735,0.884610551949874,0,0,0.969750506270444,0,0.292780797011547,0,1.02182822083437,2.39630249011841,1.19980546198682,1.27070227073065,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.272145996605311,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.32833492815819,0.162137619091711,0,0.439100230582101,0.134206418760372,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0.648414149624083,0.199141273254367,0,0,1.1270773567308,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0.156998727841375,0.246794327843601,0.889357881261447,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,0,1.48856379067401,0.312037673114561,0.505157755894224,0.538192240565737,0.482443521363367,0.554259570499814,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,15.0791283939272,44.6002660731342,0,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0.727067458955011,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0.119372344003136,0,2.62332752966866,0.18542530201051,0.341741761595705,0,0,0,0.136694227721025,0.686334519619568,4.24946074984638,1.6794174278839,3.04039942369732,0,0,0,0,0,0,0,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0,0.496375471371293,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0,0.288030006257865,1.58005560314089,0,0.102710957164827,0.389762468933385,0.179026695667481,0.198681354781265,1.08175904567972,0.590758108698309,0.504832249740738,1.143102099825,0.705783295957884,0.779663045918019,0.577271049841977,0.467507608726276,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.386379188064381,0.750729901804728,0.549454872801795,0.857473516316263,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p8@Cxcl16}} | ||
|EntrezGene=66102 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt= | |||
|association_with_transcript=64bp_to_ENSMUST00000154475_5end | |||
|description=CAGE_peak_8_at_Cxcl16_5end | |||
|id=chr11:70273251..70273269,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.65e-17,7;CL:0002194,7.65e-11,4;CL:0000766,7.65e-11,4;CL:0000234,7.65e-11,4;CL:0000576,7.65e-11,4;CL:0000235,7.65e-11,4;CL:0000864,7.65e-11,4;CL:0002009,7.65e-11,4;CL:0000040,7.65e-11,4;CL:0000559,7.65e-11,4;CL:0002092,6.28e-09,3;CL:0002540,6.28e-09,3;CL:0000068,2.45e-08,3;CL:0002202,2.45e-08,3;CL:0000069,2.45e-08,3;CL:0002632,2.45e-08,3;CL:0002368,2.45e-08,3;CL:0000307,2.45e-08,3;CL:0000377,2.45e-08,3;CL:0000682,4.50e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!9.01e-08!70;UBERON:0002193!2.50e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.45e-08,3;UBERON:0001005,2.45e-08,3;UBERON:0007196,2.45e-08,3;UBERON:0001558,2.45e-08,3;UBERON:0002465,4.50e-08,3;UBERON:0002371,2.91e-07,16;UBERON:0000344,5.24e-07,15 | |||
|phase1_expression=0,4.53668029931169,7.73498706962211,0,0,0.671517087647559,1.40167584357315,0,0.140788722151667,0.234064526321993,0,0,0,0,0.999329285446988,0,0.699561878128147,0.157731082679119,0,0,0.425216450755349,0,0,3.19984845586813,4.81759490241057,5.16808767703518,3.01533397311352,4.30942465371778,0.570070258369122,0.504060259519861,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,3.04130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,2.57836046138721,0,0,0,0,0,31.9464399634897,43.5101199529469,34.1030455174128,5.39280198933128,3.07374644257244,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.579728977403356,0,0,0,0.649776417447669,0,0.702222100658759,0,0,0,0,0,0,0,4.5463118612355,6.08063677140237,4.04419556011827,0.11418387971906,3.36619248741323,0.148442139064825,0.173485326766136,0,0,0,0,0,0.247194967734374,0.433798070759735,0.884610551949874,0,0,0.969750506270444,0,0.292780797011547,0,1.02182822083437,2.39630249011841,1.19980546198682,1.27070227073065,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0.272145996605311,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.32833492815819,0.162137619091711,0,0.439100230582101,0.134206418760372,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0.648414149624083,0.199141273254367,0,0,1.1270773567308,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0.156998727841375,0.246794327843601,0.889357881261447,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,0,1.48856379067401,0.312037673114561,0.505157755894224,0.538192240565737,0.482443521363367,0.554259570499814,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,15.0791283939272,44.6002660731342,0,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0.727067458955011,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0.119372344003136,0,2.62332752966866,0.18542530201051,0.341741761595705,0,0,0,0.136694227721025,0.686334519619568,4.24946074984638,1.6794174278839,3.04039942369732,0,0,0,0,0,0,0,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0,0.496375471371293,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0,0.288030006257865,1.58005560314089,0,0.102710957164827,0.389762468933385,0.179026695667481,0.198681354781265,1.08175904567972,0.590758108698309,0.504832249740738,1.143102099825,0.705783295957884,0.779663045918019,0.577271049841977,0.467507608726276,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.386379188064381,0.750729901804728,0.549454872801795,0.857473516316263,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p8@Cxcl16 | |||
}} |
Revision as of 20:44, 12 September 2013
Short description: | p8@Cxcl16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cxcl16_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 64bp_to_ENSMUST00000154475_5end |
EntrezGene: | Cxcl16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.65e-17 | 7 |
monopoietic cell | 7.65e-11 | 4 |
myeloid leukocyte | 7.65e-11 | 4 |
phagocyte | 7.65e-11 | 4 |
monocyte | 7.65e-11 | 4 |
macrophage | 7.65e-11 | 4 |
tissue-resident macrophage | 7.65e-11 | 4 |
macrophage dendritic cell progenitor | 7.65e-11 | 4 |
monoblast | 7.65e-11 | 4 |
promonocyte | 7.65e-11 | 4 |
bone marrow cell | 6.28e-09 | 3 |
mesenchymal stem cell of the bone marrow | 6.28e-09 | 3 |
duct epithelial cell | 2.45e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.45e-08 | 3 |
branched duct epithelial cell | 2.45e-08 | 3 |
epithelial cell of lower respiratory tract | 2.45e-08 | 3 |
respiratory epithelial cell | 2.45e-08 | 3 |
tracheal epithelial cell | 2.45e-08 | 3 |
tracheoblast | 2.45e-08 | 3 |
M cell of gut | 4.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.45e-08 | 3 |
respiratory airway | 2.45e-08 | 3 |
tracheobronchial tree | 2.45e-08 | 3 |
lower respiratory tract | 2.45e-08 | 3 |
lymphoid system | 4.50e-08 | 3 |
bone marrow | 2.91e-07 | 16 |
mucosa | 5.24e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.