FFCP PHASE1:Hg19::chr3:156878483..156878506,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57018|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20569|TSSclassifier=S|UniProt=Q9UK58|association_with_transcript=-1bp_to_ENST00000295925,NM_020307,uc003fbd.1,uc003fbf.2,uc003fbg.2,uc003fbi.1,uc011bor.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_6_at_CCNL1_5end|id=chr3:156878483..156878506,-|ontology_enrichment_celltype=CL:0002057!3.14e-30!42;CL:0000860!2.66e-27!45;CL:0000766!5.14e-24!76;CL:0000738!9.83e-21!140;CL:0002009!2.36e-20!65;CL:0000557!2.43e-19!71;CL:0002194!4.59e-19!63;CL:0000576!4.59e-19!63;CL:0000040!4.59e-19!63;CL:0000559!4.59e-19!63;CL:0000839!1.74e-17!70;CL:0000048!4.39e-14!430;CL:0002087!8.17e-14!119;CL:0000034!1.62e-13!444;CL:0000723!2.69e-13!436;CL:0002031!3.25e-13!124;CL:0000037!8.69e-13!172;CL:0000566!8.69e-13!172;CL:0000763!9.21e-13!112;CL:0000049!9.21e-13!112;CL:0000134!9.99e-13!358;CL:0002320!1.87e-12!365;CL:0000988!6.74e-11!182;CL:0002032!2.92e-10!165;CL:0000837!2.92e-10!165;CL:0000219!1.33e-08!390;CL:0002393!1.69e-07!9;CL:0002397!1.69e-07!9;CL:0000094!1.84e-07!8;CL:0000012!6.13e-07!682|ontology_enrichment_celltype_v019=CL:0000860;1.48e-47;33!CL:0002057;1.48e-47;33!CL:0000473;2.40e-34;39!CL:0000234;2.40e-34;39!CL:0000576;5.52e-33;48!CL:0000766;6.86e-27;69!CL:0000094;8.89e-15;8!CL:0002087;1.78e-11;104!CL:0002393;3.09e-11;6!CL:0002397;3.09e-11;6!CL:0000763;3.53e-11;100!CL:0000081;3.20e-10;11!CL:0000738;7.53e-10;136|ontology_enrichment_celltype_v019_2=CL:0000860,7.00e-64,42;CL:0002057,7.00e-64,42;CL:0000473,1.40e-56,48;CL:0000234,1.40e-56,48;CL:0000766,3.57e-54,72;CL:0002009,2.26e-45,61;CL:0000557,6.56e-44,67;CL:0000738,1.63e-42,136;CL:0002194,2.27e-42,59;CL:0000576,2.27e-42,59;CL:0000040,2.27e-42,59;CL:0000559,2.27e-42,59;CL:0000839,3.66e-40,66;CL:0000763,7.27e-34,108;CL:0000049,7.27e-34,108;CL:0000037,7.25e-32,168;CL:0002087,9.36e-30,115;CL:0000988,3.33e-29,177;CL:0002031,4.97e-29,120;CL:0002032,1.45e-26,161;CL:0000837,1.45e-26,161;CL:0000134,2.74e-21,354;CL:0002320,2.22e-20,361;CL:0000048,3.80e-19,427;CL:0000034,4.27e-19,441;CL:0000723,1.67e-18,433;CL:0000219,8.16e-18,386;CL:0000094,6.76e-15,8;CL:0002393,2.22e-12,9;CL:0002397,2.22e-12,9;CL:0000081,2.65e-10,11|ontology_enrichment_development_v019=CL:0002057;5.88e-45;42!CL:0000049;2.59e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.65e-18!80;UBERON:0001474!8.81e-17!86;UBERON:0002390!3.67e-15!102;UBERON:0003061!3.67e-15!102;UBERON:0004765!3.08e-14!101;UBERON:0001434!3.08e-14!101;UBERON:0002193!7.15e-14!112;UBERON:0002405!5.66e-13!115;UBERON:0002204!2.52e-12!167;UBERON:0002384!3.04e-12!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.42e-39,76;UBERON:0001474,6.67e-37,82;UBERON:0002390,1.55e-34,98;UBERON:0003061,1.55e-34,98;UBERON:0004765,2.78e-32,90;UBERON:0002193,7.55e-30,108;UBERON:0002405,3.08e-29,93;UBERON:0001434,6.33e-29,100;UBERON:0003081,1.44e-20,203;UBERON:0002384,3.84e-19,371;UBERON:0002204,9.74e-19,167;UBERON:0000926,1.65e-11,315;UBERON:0004120,1.65e-11,315;UBERON:0006603,1.65e-11,315|phase1_expression=0.726713517082227,0.428201047781966,1.12763523276777,0,0,0,0,0,0.783556884599516,0,0,0,0.263766978228454,0,0.662794751455832,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0.0764134057479513,0,0,5.90046415273356,3.83829398097213,5.26374819274658,0,0,0,0,0,6.75281010470149,8.30993112797816,9.42558903109666,14.7567392086779,0,0,0,1.59938062657521,1.51150377475524,1.4555043671269,3.48643555358527,3.70051099219643,3.71647645074124,8.05538698502021,12.808035326455,17.4996850117553,5.86067657252252,7.74581620300591,4.06279459783025,2.82363509313907,1.63743690034707,3.37085226667627,8.57034898638527,6.73950956859797,5.75403413219137,3.95821560224059,6.58230070151385,5.54092175692502,5.5139755339431,7.37600792098482,3.11411124497787,8.29120595347253,8.86520961314342,11.5110087693712,4.23779651843358,3.68277635987565,8.22802207346299,3.16882929467913,9.14198489849687,1.88692780957538,2.02191536063691,1.20141514273205,1.6072558669708,4.84521664360123,1.79025009479181,0.91332076882317,0,0,0,0.853460445133014,0,0,0,0,3.41527781465669,2.93618594685469,0.382273228125229,3.96513985737078,1.12101712596307,0.263384084775077,3.93419540227666,0.786021525498329,1.43921049299656,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0,0.80642697289893,1.06976078313403,3.18613688542158,2.43806866313962,1.34140171940727,0,0.361439152384566,0,0.289693037921647,0,4.37971383272372,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0.132957960518865,0.953962497221368,3.43196946468077,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0848667897701,38.7780264148325,0,0.496971951695318,1.01304409331664,20.5234230260489,2.29469296599051,0,0,1.0674899572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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57018 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20569 | |||
|TSSclassifier=S | |||
|UniProt=Q9UK58 | |||
|association_with_transcript=-1bp_to_ENST00000295925,NM_020307,uc003fbd.1,uc003fbf.2,uc003fbg.2,uc003fbi.1,uc011bor.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_CCNL1_5end | |||
|id=chr3:156878483..156878506,- | |||
|ontology_enrichment_celltype=CL:0002057!3.14e-30!42;CL:0000860!2.66e-27!45;CL:0000766!5.14e-24!76;CL:0000738!9.83e-21!140;CL:0002009!2.36e-20!65;CL:0000557!2.43e-19!71;CL:0002194!4.59e-19!63;CL:0000576!4.59e-19!63;CL:0000040!4.59e-19!63;CL:0000559!4.59e-19!63;CL:0000839!1.74e-17!70;CL:0000048!4.39e-14!430;CL:0002087!8.17e-14!119;CL:0000034!1.62e-13!444;CL:0000723!2.69e-13!436;CL:0002031!3.25e-13!124;CL:0000037!8.69e-13!172;CL:0000566!8.69e-13!172;CL:0000763!9.21e-13!112;CL:0000049!9.21e-13!112;CL:0000134!9.99e-13!358;CL:0002320!1.87e-12!365;CL:0000988!6.74e-11!182;CL:0002032!2.92e-10!165;CL:0000837!2.92e-10!165;CL:0000219!1.33e-08!390;CL:0002393!1.69e-07!9;CL:0002397!1.69e-07!9;CL:0000094!1.84e-07!8;CL:0000012!6.13e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-47;33!CL:0002057;1.48e-47;33!CL:0000473;2.40e-34;39!CL:0000234;2.40e-34;39!CL:0000576;5.52e-33;48!CL:0000766;6.86e-27;69!CL:0000094;8.89e-15;8!CL:0002087;1.78e-11;104!CL:0002393;3.09e-11;6!CL:0002397;3.09e-11;6!CL:0000763;3.53e-11;100!CL:0000081;3.20e-10;11!CL:0000738;7.53e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.00e-64,42;CL:0002057,7.00e-64,42;CL:0000473,1.40e-56,48;CL:0000234,1.40e-56,48;CL:0000766,3.57e-54,72;CL:0002009,2.26e-45,61;CL:0000557,6.56e-44,67;CL:0000738,1.63e-42,136;CL:0002194,2.27e-42,59;CL:0000576,2.27e-42,59;CL:0000040,2.27e-42,59;CL:0000559,2.27e-42,59;CL:0000839,3.66e-40,66;CL:0000763,7.27e-34,108;CL:0000049,7.27e-34,108;CL:0000037,7.25e-32,168;CL:0002087,9.36e-30,115;CL:0000988,3.33e-29,177;CL:0002031,4.97e-29,120;CL:0002032,1.45e-26,161;CL:0000837,1.45e-26,161;CL:0000134,2.74e-21,354;CL:0002320,2.22e-20,361;CL:0000048,3.80e-19,427;CL:0000034,4.27e-19,441;CL:0000723,1.67e-18,433;CL:0000219,8.16e-18,386;CL:0000094,6.76e-15,8;CL:0002393,2.22e-12,9;CL:0002397,2.22e-12,9;CL:0000081,2.65e-10,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.88e-45;42!CL:0000049;2.59e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.65e-18!80;UBERON:0001474!8.81e-17!86;UBERON:0002390!3.67e-15!102;UBERON:0003061!3.67e-15!102;UBERON:0004765!3.08e-14!101;UBERON:0001434!3.08e-14!101;UBERON:0002193!7.15e-14!112;UBERON:0002405!5.66e-13!115;UBERON:0002204!2.52e-12!167;UBERON:0002384!3.04e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.42e-39,76;UBERON:0001474,6.67e-37,82;UBERON:0002390,1.55e-34,98;UBERON:0003061,1.55e-34,98;UBERON:0004765,2.78e-32,90;UBERON:0002193,7.55e-30,108;UBERON:0002405,3.08e-29,93;UBERON:0001434,6.33e-29,100;UBERON:0003081,1.44e-20,203;UBERON:0002384,3.84e-19,371;UBERON:0002204,9.74e-19,167;UBERON:0000926,1.65e-11,315;UBERON:0004120,1.65e-11,315;UBERON:0006603,1.65e-11,315 | |||
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| |||
|short_description=p6@CCNL1 | |||
}} |
Revision as of 22:22, 12 September 2013
Short description: | p6@CCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CCNL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -1bp_to_ENST00000295925, NM_020307, uc003fbd.1, uc003fbf.2, uc003fbg.2, uc003fbi.1, uc011bor.1_5end |
EntrezGene: | CCNL1 |
HGNC: | 20569 |
UniProt: | Q9UK58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.42e-39 | 76 |
bone element | 6.67e-37 | 82 |
hematopoietic system | 1.55e-34 | 98 |
blood island | 1.55e-34 | 98 |
skeletal element | 2.78e-32 | 90 |
hemolymphoid system | 7.55e-30 | 108 |
immune system | 3.08e-29 | 93 |
skeletal system | 6.33e-29 | 100 |
lateral plate mesoderm | 1.44e-20 | 203 |
connective tissue | 3.84e-19 | 371 |
musculoskeletal system | 9.74e-19 | 167 |
mesoderm | 1.65e-11 | 315 |
mesoderm-derived structure | 1.65e-11 | 315 |
presumptive mesoderm | 1.65e-11 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.