FFCP PHASE1:Mm9::chr12:56593685..56593714,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=7|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:56593685..56593714,+|id=chr12:56593685..56593714,+|ontology_enrichment_celltype=CL:0000988!2.07e-07!32;CL:0002032!2.07e-07!32;CL:0000037!2.07e-07!32;CL:0000566!2.07e-07!32;CL:0000837!2.07e-07!32;CL:0000738!4.26e-07!17;CL:0002087!4.26e-07!17|ontology_enrichment_celltype_v019_2=CL:0000682,5.14e-15,3;CL:0000624,8.95e-15,8;CL:0000066,2.53e-14,25;CL:0002563,3.39e-13,9;CL:0002251,3.39e-13,9;CL:0000239,3.57e-13,6;CL:0000677,3.57e-13,6;CL:0000584,3.57e-13,6;CL:0000791,4.04e-13,9;CL:0000789,4.04e-13,9;CL:0002420,4.04e-13,9;CL:0002419,4.04e-13,9;CL:0000790,4.04e-13,9;CL:0000893,7.81e-13,6;CL:0002489,7.81e-13,6;CL:0000898,7.81e-13,6;CL:0000809,7.81e-13,6;CL:0000810,7.81e-13,6;CL:0000895,7.81e-13,6;CL:0000808,7.81e-13,6;CL:0000894,7.81e-13,6;CL:0000806,7.81e-13,6;CL:0000807,7.81e-13,6;CL:0000805,7.81e-13,6;CL:0002425,7.81e-13,6;CL:0002436,7.81e-13,6;CL:0002427,7.81e-13,6;CL:0002428,7.81e-13,6;CL:0002429,7.81e-13,6;CL:0002433,7.81e-13,6;CL:0002431,7.81e-13,6;CL:0002432,7.81e-13,6;CL:0000075,2.57e-11,7;CL:0000473,5.01e-11,7;CL:0000084,1.04e-10,11;CL:0000827,1.04e-10,11;CL:0000838,8.40e-10,12;CL:0000738,1.46e-09,17;CL:0002087,1.46e-09,17;CL:0000542,4.92e-09,13;CL:0000051,4.92e-09,13;CL:0000223,3.35e-08,20;CL:0002076,7.54e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.39e-13,9;UBERON:0004808,3.39e-13,9;UBERON:0001277,3.39e-13,9;UBERON:0000485,9.04e-11,11;UBERON:0001242,4.36e-09,13;UBERON:0001262,4.36e-09,13;UBERON:0004786,4.36e-09,13;UBERON:0000344,7.54e-08,15;UBERON:0003929,3.36e-07,55|phase1_expression=0,1.74487703819681,2.27499619694768,0.60492842261366,0,4.36486106970913,3.03696432774183,2.32421982194837,5.490760163915,4.68129052643987,0,0.0797721589953364,1.02720437958723,1.22388563386596,0,0.202475267389826,0,0.157731082679119,0.685572168028694,0.42438965179803,0.17008658030214,0,0.522399578277871,0.47997726838022,0.22940928106717,2.8711598205751,2.15380998079537,2.15471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,1.63335485009895,0.418531630736908,0,0.523523743973798,1.76469446409304,2.04913645487534,0,0.503587271902309,0.608261587317087,0.367093504323363,0,0.218025156380447,0.439372365468944,0,0,0,0.503347818173209,0.725362142011344,0.672187598284928,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.479260498023681,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0,0.339490171550376,0,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,1.50791283939272,0.54390568381871,0,0.827810238914197,0,0.35163505977661,0.163934945376675,0.252470927204373,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0.32977250588296,0,0.241251699712623,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0.299033092087958,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0,0.302899349844443,0.304827226619999,0.201652370273681,0.38983152295901,0.384847366561318,0.233753804363138,0,0,0.0897138566094757,0,0,0,1.46521299413812,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr12:56593685..56593714,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:56593685..56593714,+ | |||
|id=chr12:56593685..56593714,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.07e-07!32;CL:0002032!2.07e-07!32;CL:0000037!2.07e-07!32;CL:0000566!2.07e-07!32;CL:0000837!2.07e-07!32;CL:0000738!4.26e-07!17;CL:0002087!4.26e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.14e-15,3;CL:0000624,8.95e-15,8;CL:0000066,2.53e-14,25;CL:0002563,3.39e-13,9;CL:0002251,3.39e-13,9;CL:0000239,3.57e-13,6;CL:0000677,3.57e-13,6;CL:0000584,3.57e-13,6;CL:0000791,4.04e-13,9;CL:0000789,4.04e-13,9;CL:0002420,4.04e-13,9;CL:0002419,4.04e-13,9;CL:0000790,4.04e-13,9;CL:0000893,7.81e-13,6;CL:0002489,7.81e-13,6;CL:0000898,7.81e-13,6;CL:0000809,7.81e-13,6;CL:0000810,7.81e-13,6;CL:0000895,7.81e-13,6;CL:0000808,7.81e-13,6;CL:0000894,7.81e-13,6;CL:0000806,7.81e-13,6;CL:0000807,7.81e-13,6;CL:0000805,7.81e-13,6;CL:0002425,7.81e-13,6;CL:0002436,7.81e-13,6;CL:0002427,7.81e-13,6;CL:0002428,7.81e-13,6;CL:0002429,7.81e-13,6;CL:0002433,7.81e-13,6;CL:0002431,7.81e-13,6;CL:0002432,7.81e-13,6;CL:0000075,2.57e-11,7;CL:0000473,5.01e-11,7;CL:0000084,1.04e-10,11;CL:0000827,1.04e-10,11;CL:0000838,8.40e-10,12;CL:0000738,1.46e-09,17;CL:0002087,1.46e-09,17;CL:0000542,4.92e-09,13;CL:0000051,4.92e-09,13;CL:0000223,3.35e-08,20;CL:0002076,7.54e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.39e-13,9;UBERON:0004808,3.39e-13,9;UBERON:0001277,3.39e-13,9;UBERON:0000485,9.04e-11,11;UBERON:0001242,4.36e-09,13;UBERON:0001262,4.36e-09,13;UBERON:0004786,4.36e-09,13;UBERON:0000344,7.54e-08,15;UBERON:0003929,3.36e-07,55 | |||
|phase1_expression=0,1.74487703819681,2.27499619694768,0.60492842261366,0,4.36486106970913,3.03696432774183,2.32421982194837,5.490760163915,4.68129052643987,0,0.0797721589953364,1.02720437958723,1.22388563386596,0,0.202475267389826,0,0.157731082679119,0.685572168028694,0.42438965179803,0.17008658030214,0,0.522399578277871,0.47997726838022,0.22940928106717,2.8711598205751,2.15380998079537,2.15471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,1.63335485009895,0.418531630736908,0,0.523523743973798,1.76469446409304,2.04913645487534,0,0.503587271902309,0.608261587317087,0.367093504323363,0,0.218025156380447,0.439372365468944,0,0,0,0.503347818173209,0.725362142011344,0.672187598284928,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.479260498023681,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0,0.339490171550376,0,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,1.50791283939272,0.54390568381871,0,0.827810238914197,0,0.35163505977661,0.163934945376675,0.252470927204373,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0.32977250588296,0,0.241251699712623,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0.299033092087958,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0,0.302899349844443,0.304827226619999,0.201652370273681,0.38983152295901,0.384847366561318,0.233753804363138,0,0,0.0897138566094757,0,0,0,1.46521299413812,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr12:56593685..56593714,+ | |||
}} |
Revision as of 22:57, 12 September 2013
Short description: | p@chr12:56593685..56593714, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:56593685..56593714, + |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.39e-13 | 9 |
gastrointestinal system epithelium | 3.39e-13 | 9 |
intestinal epithelium | 3.39e-13 | 9 |
simple columnar epithelium | 9.04e-11 | 11 |
intestinal mucosa | 4.36e-09 | 13 |
wall of intestine | 4.36e-09 | 13 |
gastrointestinal system mucosa | 4.36e-09 | 13 |
mucosa | 7.54e-08 | 15 |
gut epithelium | 3.36e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.