FFCP PHASE1:Hg19::chr5:149682332..149682346,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=340075|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=32521|TSSclassifier=W|UniProt=Q5FYB1|association_with_transcript=169bp_to_ENST00000328668_5end|coexpression_cluster_id=C231|description=CAGE_peak_3_at_ARSI_5end|id=chr5:149682332..149682346,-|ontology_enrichment_celltype=CL:0000149!4.44e-08!4;CL:0000077!1.05e-07!19;CL:0002570!1.58e-07!8;CL:0000147!4.11e-07!14;CL:0000064!6.88e-07!3;CL:0005012!6.88e-07!3;CL:0000067!6.88e-07!3;CL:0002304!6.88e-07!3;CL:0002586!7.41e-07!3|ontology_enrichment_celltype_v019=CL:0000064;1.28e-17;3!CL:0000067;1.28e-17;3!CL:0005012;1.28e-17;3!CL:0002304;1.28e-17;3!CL:0002586;1.89e-17;3!CL:0000149;3.21e-13;4!CL:0000306;1.57e-12;4!CL:0002222;1.57e-12;4!CL:0002224;1.57e-12;4!CL:0000077;4.33e-10;19!CL:0000632;6.50e-08;3!CL:0000342;4.43e-07;1!CL:0002565;4.43e-07;1!CL:0002599;4.69e-07;1!CL:0000075;9.36e-07;27|ontology_enrichment_celltype_v019_2=CL:0000064,1.03e-17,3;CL:0000067,1.03e-17,3;CL:0005012,1.03e-17,3;CL:0002304,1.03e-17,3;CL:0002586,1.28e-17,3;CL:0000149,2.41e-13,4;CL:0000306,1.77e-12,4;CL:0002222,1.77e-12,4;CL:0002224,1.77e-12,4;CL:0000077,5.31e-10,19;CL:0000632,5.64e-08,3;CL:0000342,4.43e-07,1;CL:0002565,4.43e-07,1;CL:0002599,4.69e-07,1;CL:0000075,9.27e-07,27|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!4.98e-07!14|ontology_enrichment_disease_v019=DOID:3151;8.75e-07;1!DOID:3149;8.75e-07;1|ontology_enrichment_disease_v019_2=DOID:3151,8.27e-07,1;DOID:3149,8.27e-07,1|ontology_enrichment_uberon=UBERON:0007625!1.06e-16!11;UBERON:0000019!3.06e-10!19;UBERON:0000047!3.06e-10!19;UBERON:0004088!3.06e-10!19;UBERON:0003072!3.06e-10!19;UBERON:0003071!3.06e-10!19;UBERON:0004128!3.06e-10!19;UBERON:0000970!1.41e-09!20;UBERON:0002200!1.55e-09!11;UBERON:0006876!1.55e-09!11;UBERON:0002104!5.57e-09!21;UBERON:0001456!5.57e-09!21;UBERON:0000488!1.17e-08!4;UBERON:0002203!3.32e-08!6;UBERON:0001768!3.32e-08!6;UBERON:0000020!6.02e-08!23;UBERON:0001801!1.22e-07!14;UBERON:0001032!1.70e-07!24;UBERON:0004456!1.70e-07!24;UBERON:0005085!6.20e-07!29;UBERON:0004176!6.26e-07!22;UBERON:0001778!6.88e-07!3;UBERON:0001775!6.88e-07!3;UBERON:0001781!7.41e-07!3;UBERON:0001782!7.41e-07!3;UBERON:0005424!7.41e-07!3|ontology_enrichment_uberon_v019=UBERON:0007625;2.06e-48;11!UBERON:0000019;2.85e-27;19!UBERON:0000047;2.85e-27;19!UBERON:0004088;2.85e-27;19!UBERON:0010230;2.85e-27;19!UBERON:0000970;8.11e-26;20!UBERON:0002104;1.68e-24;21!UBERON:0001456;1.68e-24;21!UBERON:0000488;5.64e-23;4!UBERON:0000020;3.28e-22;23!UBERON:0001032;3.29e-21;24!UBERON:0004456;3.29e-21;24!UBERON:0010371;1.32e-18;31!UBERON:0001801;1.97e-18;14!UBERON:0001778;1.28e-17;3!UBERON:0001775;1.28e-17;3!UBERON:0001781;1.89e-17;3!UBERON:0001782;1.89e-17;3!UBERON:0002203;2.25e-15;6!UBERON:0001768;2.25e-15;6!UBERON:0002200;2.25e-15;6!UBERON:0010077;1.57e-12;4!UBERON:0005389;1.57e-12;4!UBERON:0000484;1.57e-12;4!UBERON:0000965;1.57e-12;4!UBERON:0001803;1.57e-12;4!UBERON:0000966;1.13e-10;5!UBERON:0005388;1.13e-10;5!UBERON:0001802;1.13e-10;5!UBERON:0001444;4.63e-10;48!UBERON:0000033;1.48e-08;50!UBERON:0006876;2.00e-08;11!UBERON:0002506;4.43e-07;1!UBERON:0001769;4.43e-07;1!UBERON:0007811;8.50e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.39e-48,11;UBERON:0000019,6.56e-26,20;UBERON:0000047,6.56e-26,20;UBERON:0010312,6.56e-26,20;UBERON:0004088,6.56e-26,20;UBERON:0010230,6.56e-26,20;UBERON:0003072,6.56e-26,20;UBERON:0004128,6.56e-26,20;UBERON:0003071,6.56e-26,20;UBERON:0000970,1.37e-24,21;UBERON:0002104,1.37e-24,21;UBERON:0001456,2.18e-23,22;UBERON:0000488,4.52e-23,4;UBERON:0000020,2.76e-21,24;UBERON:0001032,2.76e-21,24;UBERON:0004456,2.76e-21,24;UBERON:0005085,2.11e-19,31;UBERON:0001801,1.92e-18,14;UBERON:0001778,1.03e-17,3;UBERON:0001775,1.03e-17,3;UBERON:0001782,1.28e-17,3;UBERON:0005424,1.28e-17,3;UBERON:0002203,1.95e-15,6;UBERON:0001768,1.95e-15,6;UBERON:0002200,1.95e-15,6;UBERON:0001444,7.70e-14,49;UBERON:0001781,2.41e-13,4;UBERON:0010077,1.77e-12,4;UBERON:0005389,1.77e-12,4;UBERON:0000484,1.77e-12,4;UBERON:0002546,1.77e-12,4;UBERON:0000965,1.77e-12,4;UBERON:0001803,1.77e-12,4;UBERON:0003073,1.77e-12,4;UBERON:0005426,1.77e-12,4;UBERON:0000033,8.22e-12,56;UBERON:0000153,1.94e-10,62;UBERON:0007811,1.94e-10,62;UBERON:0000966,4.74e-09,6;UBERON:0005388,4.74e-09,6;UBERON:0001802,4.74e-09,6;UBERON:0006876,1.85e-08,11;UBERON:0001048,3.83e-07,160;UBERON:0003056,3.93e-07,61;UBERON:0002506,4.43e-07,1;UBERON:0001769,4.43e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,3.40325341790644,7.31707011626461,3.86473057049755,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=340075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32521 | |||
|TSSclassifier=W | |||
|UniProt=Q5FYB1 | |||
|association_with_transcript=169bp_to_ENST00000328668_5end | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_3_at_ARSI_5end | |||
|id=chr5:149682332..149682346,- | |||
|ontology_enrichment_celltype=CL:0000149!4.44e-08!4;CL:0000077!1.05e-07!19;CL:0002570!1.58e-07!8;CL:0000147!4.11e-07!14;CL:0000064!6.88e-07!3;CL:0005012!6.88e-07!3;CL:0000067!6.88e-07!3;CL:0002304!6.88e-07!3;CL:0002586!7.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.28e-17;3!CL:0000067;1.28e-17;3!CL:0005012;1.28e-17;3!CL:0002304;1.28e-17;3!CL:0002586;1.89e-17;3!CL:0000149;3.21e-13;4!CL:0000306;1.57e-12;4!CL:0002222;1.57e-12;4!CL:0002224;1.57e-12;4!CL:0000077;4.33e-10;19!CL:0000632;6.50e-08;3!CL:0000342;4.43e-07;1!CL:0002565;4.43e-07;1!CL:0002599;4.69e-07;1!CL:0000075;9.36e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.03e-17,3;CL:0000067,1.03e-17,3;CL:0005012,1.03e-17,3;CL:0002304,1.03e-17,3;CL:0002586,1.28e-17,3;CL:0000149,2.41e-13,4;CL:0000306,1.77e-12,4;CL:0002222,1.77e-12,4;CL:0002224,1.77e-12,4;CL:0000077,5.31e-10,19;CL:0000632,5.64e-08,3;CL:0000342,4.43e-07,1;CL:0002565,4.43e-07,1;CL:0002599,4.69e-07,1;CL:0000075,9.27e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.98e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;8.75e-07;1!DOID:3149;8.75e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,8.27e-07,1;DOID:3149,8.27e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.06e-16!11;UBERON:0000019!3.06e-10!19;UBERON:0000047!3.06e-10!19;UBERON:0004088!3.06e-10!19;UBERON:0003072!3.06e-10!19;UBERON:0003071!3.06e-10!19;UBERON:0004128!3.06e-10!19;UBERON:0000970!1.41e-09!20;UBERON:0002200!1.55e-09!11;UBERON:0006876!1.55e-09!11;UBERON:0002104!5.57e-09!21;UBERON:0001456!5.57e-09!21;UBERON:0000488!1.17e-08!4;UBERON:0002203!3.32e-08!6;UBERON:0001768!3.32e-08!6;UBERON:0000020!6.02e-08!23;UBERON:0001801!1.22e-07!14;UBERON:0001032!1.70e-07!24;UBERON:0004456!1.70e-07!24;UBERON:0005085!6.20e-07!29;UBERON:0004176!6.26e-07!22;UBERON:0001778!6.88e-07!3;UBERON:0001775!6.88e-07!3;UBERON:0001781!7.41e-07!3;UBERON:0001782!7.41e-07!3;UBERON:0005424!7.41e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.06e-48;11!UBERON:0000019;2.85e-27;19!UBERON:0000047;2.85e-27;19!UBERON:0004088;2.85e-27;19!UBERON:0010230;2.85e-27;19!UBERON:0000970;8.11e-26;20!UBERON:0002104;1.68e-24;21!UBERON:0001456;1.68e-24;21!UBERON:0000488;5.64e-23;4!UBERON:0000020;3.28e-22;23!UBERON:0001032;3.29e-21;24!UBERON:0004456;3.29e-21;24!UBERON:0010371;1.32e-18;31!UBERON:0001801;1.97e-18;14!UBERON:0001778;1.28e-17;3!UBERON:0001775;1.28e-17;3!UBERON:0001781;1.89e-17;3!UBERON:0001782;1.89e-17;3!UBERON:0002203;2.25e-15;6!UBERON:0001768;2.25e-15;6!UBERON:0002200;2.25e-15;6!UBERON:0010077;1.57e-12;4!UBERON:0005389;1.57e-12;4!UBERON:0000484;1.57e-12;4!UBERON:0000965;1.57e-12;4!UBERON:0001803;1.57e-12;4!UBERON:0000966;1.13e-10;5!UBERON:0005388;1.13e-10;5!UBERON:0001802;1.13e-10;5!UBERON:0001444;4.63e-10;48!UBERON:0000033;1.48e-08;50!UBERON:0006876;2.00e-08;11!UBERON:0002506;4.43e-07;1!UBERON:0001769;4.43e-07;1!UBERON:0007811;8.50e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.39e-48,11;UBERON:0000019,6.56e-26,20;UBERON:0000047,6.56e-26,20;UBERON:0010312,6.56e-26,20;UBERON:0004088,6.56e-26,20;UBERON:0010230,6.56e-26,20;UBERON:0003072,6.56e-26,20;UBERON:0004128,6.56e-26,20;UBERON:0003071,6.56e-26,20;UBERON:0000970,1.37e-24,21;UBERON:0002104,1.37e-24,21;UBERON:0001456,2.18e-23,22;UBERON:0000488,4.52e-23,4;UBERON:0000020,2.76e-21,24;UBERON:0001032,2.76e-21,24;UBERON:0004456,2.76e-21,24;UBERON:0005085,2.11e-19,31;UBERON:0001801,1.92e-18,14;UBERON:0001778,1.03e-17,3;UBERON:0001775,1.03e-17,3;UBERON:0001782,1.28e-17,3;UBERON:0005424,1.28e-17,3;UBERON:0002203,1.95e-15,6;UBERON:0001768,1.95e-15,6;UBERON:0002200,1.95e-15,6;UBERON:0001444,7.70e-14,49;UBERON:0001781,2.41e-13,4;UBERON:0010077,1.77e-12,4;UBERON:0005389,1.77e-12,4;UBERON:0000484,1.77e-12,4;UBERON:0002546,1.77e-12,4;UBERON:0000965,1.77e-12,4;UBERON:0001803,1.77e-12,4;UBERON:0003073,1.77e-12,4;UBERON:0005426,1.77e-12,4;UBERON:0000033,8.22e-12,56;UBERON:0000153,1.94e-10,62;UBERON:0007811,1.94e-10,62;UBERON:0000966,4.74e-09,6;UBERON:0005388,4.74e-09,6;UBERON:0001802,4.74e-09,6;UBERON:0006876,1.85e-08,11;UBERON:0001048,3.83e-07,160;UBERON:0003056,3.93e-07,61;UBERON:0002506,4.43e-07,1;UBERON:0001769,4.43e-07,1 | |||
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|short_description=p3@ARSI | |||
}} |
Revision as of 14:03, 13 September 2013
Short description: | p3@ARSI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ARSI_5end |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | 169bp_to_ENST00000328668_5end |
EntrezGene: | ARSI |
HGNC: | 32521 |
UniProt: | Q5FYB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.03e-17 | 3 |
ciliated epithelial cell | 1.03e-17 | 3 |
multi-ciliated epithelial cell | 1.03e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.03e-17 | 3 |
retinal pigment epithelial cell | 1.28e-17 | 3 |
visual pigment cell | 2.41e-13 | 4 |
crystallin accumulating cell | 1.77e-12 | 4 |
vertebrate lens cell | 1.77e-12 | 4 |
lens epithelial cell | 1.77e-12 | 4 |
mesothelial cell | 5.31e-10 | 19 |
hepatic stellate cell | 5.64e-08 | 3 |
pigment cell (sensu Vertebrata) | 4.43e-07 | 1 |
iris pigment epithelial cell | 4.43e-07 | 1 |
smooth muscle cell of the esophagus | 4.69e-07 | 1 |
columnar/cuboidal epithelial cell | 9.27e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 8.27e-07 | 1 |
keratoacanthoma | 8.27e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.