FFCP PHASE1:Hg19::chr6:41168804..41168831,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79865|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21092|TSSclassifier=S|UniProt=Q5T2D2|association_with_transcript=93bp_to_NM_024807,uc010jxm.1_5end|coexpression_cluster_id=C2610|description=CAGE_peak_3_at_TREML2_5end|id=chr6:41168804..41168831,-|ontology_enrichment_celltype=CL:0000037!1.34e-54!172;CL:0000566!1.34e-54!172;CL:0000738!4.63e-51!140;CL:0002032!1.17e-50!165;CL:0000837!1.17e-50!165;CL:0000988!7.17e-50!182;CL:0002087!5.07e-44!119;CL:0002031!4.77e-41!124;CL:0000763!2.24e-29!112;CL:0000049!2.24e-29!112;CL:0002057!4.18e-29!42;CL:0000766!1.98e-26!76;CL:0000860!2.26e-26!45;CL:0000839!7.41e-22!70;CL:0000945!7.59e-22!24;CL:0000826!7.59e-22!24;CL:0002009!8.57e-22!65;CL:0002194!1.20e-21!63;CL:0000576!1.20e-21!63;CL:0000040!1.20e-21!63;CL:0000559!1.20e-21!63;CL:0000557!6.35e-20!71;CL:0000542!5.95e-19!53;CL:0000051!5.95e-19!53;CL:0000838!4.19e-18!52;CL:0000236!1.23e-16!14;CL:0000134!1.34e-12!358;CL:0002320!7.54e-12!365;CL:0000219!2.85e-09!390;CL:0000094!1.02e-08!8;CL:0000451!8.93e-07!10|ontology_enrichment_celltype_v019=CL:0000236;1.56e-24;13!CL:0000945;6.77e-23;24!CL:0000860;1.58e-18;33!CL:0002057;1.58e-18;33!CL:0000473;1.38e-12;39!CL:0000234;1.38e-12;39!CL:0000542;1.01e-10;53!CL:0000775;5.56e-10;3!CL:0000738;1.56e-09;136!CL:0000094;1.58e-09;8!CL:0000784;4.04e-09;3!CL:0000576;5.67e-09;48!CL:0002087;1.34e-08;104!CL:0000771;2.88e-07;2!CL:0000081;8.76e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,4.54e-33,136;CL:0000037,1.86e-31,168;CL:0002032,3.41e-30,161;CL:0000837,3.41e-30,161;CL:0000988,3.55e-29,177;CL:0002087,1.81e-27,115;CL:0002031,2.23e-27,120;CL:0000236,5.71e-27,14;CL:0000945,7.46e-23,24;CL:0000826,7.46e-23,24;CL:0000766,1.09e-17,72;CL:0000838,1.29e-15,52;CL:0000860,2.54e-15,42;CL:0002057,2.54e-15,42;CL:0000542,3.21e-15,53;CL:0000051,3.21e-15,53;CL:0000763,5.01e-15,108;CL:0000049,5.01e-15,108;CL:0002194,1.94e-13,59;CL:0000576,1.94e-13,59;CL:0000040,1.94e-13,59;CL:0000559,1.94e-13,59;CL:0000473,7.64e-13,48;CL:0000234,7.64e-13,48;CL:0002009,7.80e-13,61;CL:0000839,9.34e-13,66;CL:0000557,3.04e-11,67;CL:0000775,5.58e-10,3;CL:0000094,1.58e-09,8;CL:0000784,4.11e-09,3;CL:0000134,3.61e-08,354;CL:0002320,8.86e-08,361;CL:0000771,2.89e-07,2;CL:0000081,8.77e-07,11|ontology_enrichment_development_v019=CL:0002057;3.71e-11;42!CL:0000051;1.01e-10;53|ontology_enrichment_disease=DOID:2531!5.72e-07!51;DOID:0060083!5.72e-07!51;DOID:1240!9.21e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.23e-29!102;UBERON:0003061!6.23e-29!102;UBERON:0002193!3.97e-27!112;UBERON:0002371!2.12e-17!80;UBERON:0001474!2.95e-16!86;UBERON:0002405!5.45e-13!115;UBERON:0000178!2.58e-12!15;UBERON:0000179!2.58e-12!15;UBERON:0000463!2.58e-12!15;UBERON:0004765!5.29e-12!101;UBERON:0001434!5.29e-12!101;UBERON:0002384!7.72e-11!375|ontology_enrichment_uberon_v019=UBERON:0000178;4.15e-14;15!UBERON:0000179;4.15e-14;15!UBERON:0000463;4.15e-14;15!UBERON:0002390;2.74e-10;32!UBERON:0002193;9.36e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.03e-21,98;UBERON:0003061,1.03e-21,98;UBERON:0002193,1.30e-21,108;UBERON:0000178,4.33e-14,15;UBERON:0000179,4.33e-14,15;UBERON:0000463,4.33e-14,15;UBERON:0002405,1.44e-12,93;UBERON:0002371,2.06e-10,76;UBERON:0001474,2.79e-09,82;UBERON:0004765,5.11e-08,90;UBERON:0003081,1.66e-07,203;UBERON:0002384,2.99e-07,371;UBERON:0001434,9.71e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.393553906568396,0.393364276848904,0,0.154816123316076,0,0,0,0.619737604642413,0,0,0,0,0.434021741431704,0,0,0,1.59938062657521,0,1.21292030593908,0.697287110717054,0.411167888021826,0.619412741790207,2.58923153089935,2.56160706529101,3.31075121844019,1.03423704220986,0,0,1.31769637679823,0.272906150057846,1.34834090667051,0,0.641858054152187,1.91801137739712,3.62836430205388,2.19410023383795,4.26224750532694,0.290209238628584,0,1.86846674698672,2.76373531782418,2.08593167368081,3.9093992046921,1.21079900526674,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,0.786300418025466,1.20141514273205,0.48217676009124,0.855038231223746,0.39783335439818,0.365328307529268,14.0796995569058,14.7457425040775,9.7846017924991,12.8019066769952,15.2150475073685,10.3455439191807,14.542987201267,15.2648600725658,1.1384259382189,1.17447437874188,2.6759125968766,0,0,0.263384084775077,0,0,0.205601498999509,3.00935691703221,0,0.473447805734733,0,2.00538822393312,0,0.221533894583621,0.270803863765016,2.81800903396485,2.60118695119756,0.164437904603676,0.829050053357545,0.579606171470105,0.14828656316206,0,0,1.0197840842781,0,0.34362744548263,0,0.318565414324097,1.30216690771284,0,1.20460095262218,0.127986611154418,0,0.947109008176067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.56716763569341,1.06366368415092,4.5313218618015,3.43196946468077,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.3477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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79865 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21092 | |||
|TSSclassifier=S | |||
|UniProt=Q5T2D2 | |||
|association_with_transcript=93bp_to_NM_024807,uc010jxm.1_5end | |||
|coexpression_cluster_id=C2610 | |||
|description=CAGE_peak_3_at_TREML2_5end | |||
|id=chr6:41168804..41168831,- | |||
|ontology_enrichment_celltype=CL:0000037!1.34e-54!172;CL:0000566!1.34e-54!172;CL:0000738!4.63e-51!140;CL:0002032!1.17e-50!165;CL:0000837!1.17e-50!165;CL:0000988!7.17e-50!182;CL:0002087!5.07e-44!119;CL:0002031!4.77e-41!124;CL:0000763!2.24e-29!112;CL:0000049!2.24e-29!112;CL:0002057!4.18e-29!42;CL:0000766!1.98e-26!76;CL:0000860!2.26e-26!45;CL:0000839!7.41e-22!70;CL:0000945!7.59e-22!24;CL:0000826!7.59e-22!24;CL:0002009!8.57e-22!65;CL:0002194!1.20e-21!63;CL:0000576!1.20e-21!63;CL:0000040!1.20e-21!63;CL:0000559!1.20e-21!63;CL:0000557!6.35e-20!71;CL:0000542!5.95e-19!53;CL:0000051!5.95e-19!53;CL:0000838!4.19e-18!52;CL:0000236!1.23e-16!14;CL:0000134!1.34e-12!358;CL:0002320!7.54e-12!365;CL:0000219!2.85e-09!390;CL:0000094!1.02e-08!8;CL:0000451!8.93e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.56e-24;13!CL:0000945;6.77e-23;24!CL:0000860;1.58e-18;33!CL:0002057;1.58e-18;33!CL:0000473;1.38e-12;39!CL:0000234;1.38e-12;39!CL:0000542;1.01e-10;53!CL:0000775;5.56e-10;3!CL:0000738;1.56e-09;136!CL:0000094;1.58e-09;8!CL:0000784;4.04e-09;3!CL:0000576;5.67e-09;48!CL:0002087;1.34e-08;104!CL:0000771;2.88e-07;2!CL:0000081;8.76e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.54e-33,136;CL:0000037,1.86e-31,168;CL:0002032,3.41e-30,161;CL:0000837,3.41e-30,161;CL:0000988,3.55e-29,177;CL:0002087,1.81e-27,115;CL:0002031,2.23e-27,120;CL:0000236,5.71e-27,14;CL:0000945,7.46e-23,24;CL:0000826,7.46e-23,24;CL:0000766,1.09e-17,72;CL:0000838,1.29e-15,52;CL:0000860,2.54e-15,42;CL:0002057,2.54e-15,42;CL:0000542,3.21e-15,53;CL:0000051,3.21e-15,53;CL:0000763,5.01e-15,108;CL:0000049,5.01e-15,108;CL:0002194,1.94e-13,59;CL:0000576,1.94e-13,59;CL:0000040,1.94e-13,59;CL:0000559,1.94e-13,59;CL:0000473,7.64e-13,48;CL:0000234,7.64e-13,48;CL:0002009,7.80e-13,61;CL:0000839,9.34e-13,66;CL:0000557,3.04e-11,67;CL:0000775,5.58e-10,3;CL:0000094,1.58e-09,8;CL:0000784,4.11e-09,3;CL:0000134,3.61e-08,354;CL:0002320,8.86e-08,361;CL:0000771,2.89e-07,2;CL:0000081,8.77e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.71e-11;42!CL:0000051;1.01e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!5.72e-07!51;DOID:0060083!5.72e-07!51;DOID:1240!9.21e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.23e-29!102;UBERON:0003061!6.23e-29!102;UBERON:0002193!3.97e-27!112;UBERON:0002371!2.12e-17!80;UBERON:0001474!2.95e-16!86;UBERON:0002405!5.45e-13!115;UBERON:0000178!2.58e-12!15;UBERON:0000179!2.58e-12!15;UBERON:0000463!2.58e-12!15;UBERON:0004765!5.29e-12!101;UBERON:0001434!5.29e-12!101;UBERON:0002384!7.72e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.15e-14;15!UBERON:0000179;4.15e-14;15!UBERON:0000463;4.15e-14;15!UBERON:0002390;2.74e-10;32!UBERON:0002193;9.36e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.03e-21,98;UBERON:0003061,1.03e-21,98;UBERON:0002193,1.30e-21,108;UBERON:0000178,4.33e-14,15;UBERON:0000179,4.33e-14,15;UBERON:0000463,4.33e-14,15;UBERON:0002405,1.44e-12,93;UBERON:0002371,2.06e-10,76;UBERON:0001474,2.79e-09,82;UBERON:0004765,5.11e-08,90;UBERON:0003081,1.66e-07,203;UBERON:0002384,2.99e-07,371;UBERON:0001434,9.71e-07,100 | |||
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|short_description=p3@TREML2 | |||
}} |
Revision as of 20:58, 13 September 2013
Short description: | p3@TREML2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TREML2_5end |
Coexpression cluster: | C2610_smallcell_Neutrophils_Eosinophils_Whole_CD19_CD14_placenta |
Association with transcript: | 93bp_to_NM_024807, uc010jxm.1_5end |
EntrezGene: | TREML2 |
HGNC: | 21092 |
UniProt: | Q5T2D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.03e-21 | 98 |
blood island | 1.03e-21 | 98 |
hemolymphoid system | 1.30e-21 | 108 |
blood | 4.33e-14 | 15 |
haemolymphatic fluid | 4.33e-14 | 15 |
organism substance | 4.33e-14 | 15 |
immune system | 1.44e-12 | 93 |
bone marrow | 2.06e-10 | 76 |
bone element | 2.79e-09 | 82 |
skeletal element | 5.11e-08 | 90 |
lateral plate mesoderm | 1.66e-07 | 203 |
connective tissue | 2.99e-07 | 371 |
skeletal system | 9.71e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.